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If there's no compiler we currently don't have any external libc for the solver.
This commit adds a fallback on libc from the current Python process, which works if it is dynamically linked.
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
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The default runner changed on GitHub for macOS, and that
revealed a bug in a package when running audits
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When looking at where we spend our time in solver setup, I noticed a fair bit of time is spent
in `Spec.format()`, and `Spec.format()` is a pretty old, slow, convoluted method.
This PR does a number of things:
- [x] Consolidate most of what was being done manually with a character loop and several
regexes into a single regex.
- [x] Precompile regexes where we keep them
- [x] Remove the `transform=` argument to `Spec.format()` which was only used in one
place in the code (modules) to uppercase env var names, but added a lot of complexity
- [x] Avoid escaping and colorizing specs unless necessary
- [x] Refactor a lot of the colorization logic to avoid unnecessary object construction
- [x] Add type hints and remove some spots in the code where we were using nonexistent
arguments to `format()`.
- [x] Add trivial cases to `__str__` in `VariantMap` and `VersionList` to avoid sorting
- [x] Avoid calling `isinstance()` in the main loop of `Spec.format()`
- [x] Don't bother constructing a `string` representation for the result of `_prev_version`
as it is only used for comparisons.
In my timings (on all the specs formatted in a solve of `hdf5`), this is over 2.67x faster than the
original `format()`, and it seems to reduce setup time by around a second (for `hdf5`).
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* Adding UCX 1.16.0
* Fixed hash
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* Tags: add more build tools
* py-pythran: add maintainer
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The reverse provider lookup may have stale entries for deleted packages, which used to cause errors. It's hard to invalidate those cache entries, so this commit simply drops entries w/o invalidating the cache.
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
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since it's the status quo on linux after libc as external by default
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This commit differentiate linux from other platforms by
using libc compatibility as a criterion for deciding
which buildcaches / binaries can be reused. Other
platforms still use OS compatibility.
On linux a libc is injected by all compilers as an implicit
external, and the compatibility criterion is that a libc is
compatible with all other libcs with the same name and a
version that is lesser or equal.
Some concretization unit tests use libc when run on linux.
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Some logic to detect what libc the c / cxx compilers use by default,
based on `-dynamic-linker`.
The function `compiler.default_libc()` returns a `Spec` of the form
`glibc@x.y` or `musl@x.y` with the `external_path` property set.
The idea is this can be injected as a dependency.
If we can't run the dynamic linker directly, fall back to `ldd` relative
to the prefix computed from `ld.so.`
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In the future we may transform the database from a single JSON object to
a stream of JSON objects.
This paves the way for constant time writes and constant time rereads
when only O(1) changes are made. Currently both are linear time.
This commit gives just enough forward compat for Spack to produce a
friendly error when we would move to a stream of json objects, and a db
would look like this:
```json
{"database": {"version": "<something newer>"}}
```
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closes #43406
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* compiler wrapper: prioritize spack managed paths in search order
This commit partitions search paths of -L, -I (and -rpath) into three
groups, from highest priority to lowest:
1. Spack managed directories: these include absolute paths such as
stores and the stage dir, as well as all relative paths since they
are relative to a Spack owned dir
2. Non-system dirs: these are for externals that live in non-system
locations
3. System dirs: your typical `/usr/lib` etc.
It's very easy for Spack to known the prefixes it owns, it's much more
difficult to tell system dirs from non-system dirs. Before this commit
Spack tried to distinguish only system and non-system dirs, and failed
for very trivial cases like `/usr/lib/x/..` which comes up often, since
build systems sometimes copy search paths from `gcc -print-search-dirs`.
Potentially this implementation is even faster than the current state of
things, since a loop over paths is replaced with an eval'ed `case ...`.
* Trigger a pipeline
* Revert "Trigger a pipeline"
This reverts commit 5d7fa863de91c5557ef4432c0ea105ed0924a6e8.
* remove redudant return statement
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* Added e4s-cl@1.0.3
* add e4s-alc package
* removed trailing whitespace
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* Update PennyLane packages to v0.32.
* Reformat.
* Couple small fixes.
* Fix Lightning cmake_args.
* Couple dep fixes in py-pennylane + plugins.
* Fix scipy condition.
* Add comment on conflicting requirement.
* Update py-pl versions
* Update lightning versions.
* Fix copyright.
* Fix license.
* Update pl-kokkos versions
* run black
* Fix L-Kokkos build and update autoray.
* build step only required for older versions. update autograd
* Fix LK@0.31 kokkos compat issue. Introduce url_for_version.
* Fix few more version bounds.
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* fms: add two variants supporting existing build options.
* Style fixes.
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* Add conflicts for some blas implementations that don't build on
Windows (or with %msvc)
* Need to enclose CC/CXX variables in quotes in case those paths
have spaces, otherwise Meson runs into errors
* On Windows, Python dependencies now add <prefix>/Scripts to the
PATH (this is established as a standard in PEP 370)
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* Later versions of oneAPI have moved, so update detection to find it
in both old and new location
* Remove reliance on ONEAPI_ROOT env variable when determining Fortran
compiler version for %msvc
* When finding a Fortran compiler for MSVC, there was logic enforcing
a maximum MSVC version for a given oneAPI Fortran version. This
mapping was out of date and excluding valid combinations, so has
been removed (the logic now just picks the latest available
oneAPI Fortran compiler for any given MSVC version).
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On Windows, bootstrapping logic now searches for and adds the win-sdk
and wgl packages to the user's top scope as externals if they are not
present.
These packages are generally required to install most packages with
Spack on Windows, and are only available as externals, so it is
assumed that doing this automatically would be useful and avoid
a mandatory manual step for each new Spack instance.
Note this is the first case of bootstrapping logic modifying
configuration other than the bootstrap configuration.
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* spaceranger: new manual download package @2.1.1
* Adding license url
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Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
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* cellranger: new manual download package @7.1.0
* cellranger: updating to @7.2.0
* updating website
* Adding license url
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Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
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* xeniumranger: new manual download package @1.7.1
* Adding license url
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Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
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* New package: editorconfig
* remove FIXMEs
* add description for editorconfig
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