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2016-07-13log : changed semantic for start / join (now it's explicit)alalazo1-2/+13
2016-07-13package.py : added CMakePackage, changed qhull, ibmisc, openjpeg to work as ↵alalazo4-123/+159
examples
2016-07-13log : added timeout to avoid deadlocks on daemon joinalalazo1-1/+1
2016-07-13package.py : workaround for a known bug that was not fixed in python 2.6alalazo1-2/+12
https://bugs.python.org/issue1515
2016-07-13package.py : hdf5 and lzo have examples of run_testsalalazo3-22/+41
2016-07-13package.py : extra arguments, fixed inheritance issuealalazo3-22/+41
- added attribute to hold extra arguments in PackageBase instances - fixed registration from within packages - examples : hdf5, lzo
2016-07-13package.py : updated logic to log.py reworkalalazo1-2/+7
Conflicts: lib/spack/spack/package.py
2016-07-13do_install : can stop at an arbitrary phasealalazo1-23/+18
Now uses a StopIteration exception as a signal
2016-07-13log_output : moved from os.fork to multiprocessing.Processalalazo1-118/+78
2016-07-13build_environment : moved from os.fork to multiprocessing.Processalalazo1-32/+15
2016-07-13do_install : can stop at an arbitrary phasealalazo1-62/+56
The mechanism would be simpler if we could leverage exceptions to raise signals. Unfortunately forking does not permit to do so.
2016-07-13package : added EditableMakefilealalazo7-48/+78
Modifications : - added EditableMakefile to PackageBase subclasses - astyle modified as an example - preliminary hook to stop at a certain phase of install
2016-07-13package : added a stub for AutotoolsPackage, examples in szip and swiftsimalalazo4-72/+109
2016-07-13package : introduced InstallPhase, added decorators for prerequisites and ↵alalazo2-85/+133
sanity_checks of phases
2016-07-13package : added hooks for generic phasesalalazo2-73/+93
2016-07-12Merge pull request #1223 from glennpj/tidyrTodd Gamblin1-0/+49
New package - r-tidyr
2016-07-12Merge pull request #1222 from glennpj/libxml2Todd Gamblin1-4/+0
Use the site_packages_dir from the Python class
2016-07-11New package - r-tidyrGlenn Johnson1-0/+49
Tools for changing the layout of data sets.
2016-07-11Remove import of osGlenn Johnson1-1/+0
The import of `os` is no longer needed.
2016-07-11Use the site_packages_dir from the Python classGlenn Johnson1-3/+0
It is not necessary to set site_packages_dir in this package as it is already provided by the Python package class.
2016-07-11Merge pull request #1215 from glennpj/prefix_inspectionsTodd Gamblin1-0/+2
Add share/man to prefix inspections.
2016-07-11Merge pull request #1207 from davydden/pkg/dealii_update_petsc37Todd Gamblin1-93/+107
dealii: update for petsc37
2016-07-11Merge pull request #1220 from glennpj/libxml2Todd Gamblin1-2/+6
Fix libxml2 error reported on Google Groups list
2016-07-11Fix flake8 errorGlenn Johnson1-2/+2
2016-07-11Fix error reported on Google Groups listGlenn Johnson1-2/+6
Fixes the reported `TypeError: not enough arguments for format string` error.
2016-07-11Merge pull request #1217 from LLNL/features/git-submodule-initTodd Gamblin2-2/+19
Add `submodules` option for git fetching.
2016-07-11Add documentation for fetching submodules.Todd Gamblin1-0/+12
2016-07-11Add `submodules` option for git fetching.Todd Gamblin1-2/+7
2016-07-11Merge pull request #1218 from glennpj/dplyrTodd Gamblin4-0/+182
New package - r-dplyr
2016-07-11Merge pull request #1219 from glennpj/lubridateTodd Gamblin1-0/+47
New package - r-lubridate
2016-07-11New package - r-lubridateGlenn Johnson1-0/+47
Functions to work with date-times and timespans.
2016-07-11New package - r-dplyrGlenn Johnson4-0/+182
This brings in dplyr and dependencies.
2016-07-11Merge pull request #1214 from glennpj/rfilterTodd Gamblin1-0/+24
Filter compilers for R
2016-07-11Add share/man to prefix inspections.Glenn Johnson1-0/+2
The share/man path should be in prefix_inspections for MANPATH as share/man is a common location for manual pages.
2016-07-11Merge pull request #1190 from davydden/feature/version_devTodd Gamblin4-11/+37
add special treatment of @develop version
2016-07-11Filter compilers for RGlenn Johnson1-0/+24
This adds a filter_compilers function to have the Makeconf file for R point to the actual compilers rather than the spack wrappers. Also added version 3.3.1.
2016-07-11document special treatment of development versionDenis Davydov1-10/+21
2016-07-11Merge pull request #1210 from hartzell/patch-2Todd Gamblin1-1/+1
Typo: verison -> version
2016-07-11Typo: verison -> versionGeorge Hartzell1-1/+1
2016-07-11Merge pull request #1206 from davydden/pkg/slepc_371_fixTodd Gamblin2-5/+42
slepc: fix install_name for binaries on macOS for 3.7.1
2016-07-11Merge pull request #1209 from paulhopkins/bugfix/octave-suitesparse-variantTodd Gamblin1-1/+1
Fix typo in Octave variant suitesparse
2016-07-11Fix typo in Octave variant suitesparsePaul Hopkins1-1/+1
2016-07-11dealii: fix directory structureDenis Davydov1-0/+10
2016-07-11dealii: flake8 fixesDenis Davydov1-2/+4
2016-07-11dealii: run tests only when self.run_tests=trueDenis Davydov1-87/+88
2016-07-11dealii: add petsc/slepc 3.7 supportDenis Davydov1-6/+7
2016-07-11slepc: fix install_name for binaries on macOS for 3.7.1Denis Davydov2-5/+42
2016-07-10add special treatment of develop versionDenis Davydov3-1/+16
2016-07-09Merge pull request #1169 from ↵Todd Gamblin3-15/+30
davydden/feature/install_argument_tests_petsc_fixes --run-tests install argument and petsc fixes
2016-07-09petsc: add -lm when building exampleDenis Davydov1-1/+1