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2020-05-20tests: check presence not equality for rpath changes (#16637)Tamara Dahlgren1-3/+9
Fixes #16636
2020-05-19py-scikit-learn: add latest version (#16731)Adam J. Stewart1-1/+2
2020-05-19mantevo: update urls to new website (#16732)Christoph Junghans9-9/+9
2020-05-19py-tensorflow-estimator: new version 2.2.0 (#16726)Andrew W Elble1-3/+5
2020-05-19Add new Acts release (#16718)Hadrien G1-0/+1
2020-05-19Introduce version 1.0.0 for py-xenv and remove unreleased development ↵Thomas Madlener2-5/+3
release (#16722) Problems in 0.0.4 should be fixed for 1.0.0
2020-05-19update URL and sha256 for aws-parallelcluster 2.7.0 (#16717)ddeidda1-1/+2
Signed-off-by: ddeidda <ddeidda@amazon.com>
2020-05-19openssl: Be Explicit About perl Usage (#16721)Dr. Christian Tacke1-0/+3
The openssl build process can use the wrong perl for various reasons, including: * Wrong value in PERL env var * The build process first looks for `perl5`, which the spack system does not provide, but some other distributions provide it. That way, the build process can end up using the wrong perl. Stop all of these problems by explicitly setting PERL to the to be used dependency.
2020-05-19Add new package: http-post (#16678)darmac1-0/+35
* Add new package: http-post * refine version name
2020-05-19Add new package: http-ping (#16675)darmac1-0/+34
* Add new package: http-ping * refine version name
2020-05-19Pipelines: Ensure consistent spack version for entire pipelineScott Wittenburg1-16/+4
Also retry jobs always, as script failure is not confined to only our spack ci rebuild command exit code.
2020-05-18[podio] fix root cxxstd dependency (#16708)vvolkl1-11/+6
2020-05-18Add new package: http-load (#16676)darmac1-0/+33
* Add new package: http-load * refine version format * fix date/version error
2020-05-18Add new package: http-get (#16677)darmac1-0/+35
* Add new package: http-get * refine version name
2020-05-18move source dir to last cmake arg (#16709)Greg Becker1-2/+2
2020-05-18TensorFlow: add new versions (#16703)Adam J. Stewart1-0/+3
2020-05-18r-decipher: new package at 2.12.0 (#16705)Justin S1-0/+27
2020-05-18angsd: add 0.933, add misc programs to install (#16669)Justin S1-1/+17
* angsd: add 0.933, add misc programs to install * angsd: add r variant
2020-05-18paraview: use kits by default (#16698)Utkarsh Ayachit1-0/+13
Adding a variant to enable/disable kits and making the default use kits.
2020-05-18r-tensor: New package (#16697)Amjad Kotobi1-0/+20
2020-05-18r-goftest: New package (#16699)Amjad Kotobi1-0/+20
2020-05-18Update Apache arrow to 0.17.1 (#16701)Nick Robison1-0/+2
Update Arrow to the latest version. Also add an additional dependency on `thrift` when building with Parquet support.
2020-05-18Add new package: hyperscan (#16681)darmac1-0/+31
* Add new package: hyperscan * hyperscan: remove cmake_args()
2020-05-18New package: py-pyeda (#16416)archxlith1-0/+18
* New package: py-pyeda * py-pyeda: added dep for python 3.3 or greater * [py-pyeda] Added space in depends_on python line
2020-05-18PyYAML: fix linking to libyaml (#16682)Adam J. Stewart1-0/+32
2020-05-18revocap-refiner: fixed typo in pic flags (#16694)h-denpo1-1/+1
2020-05-17hwloc: Add libudev variant. (#16615)Toyohisa Kameyama1-0/+7
* hwloc: Add libudev variant. * typo fix. * Wrong version for libudev variant is fixed. * Add maintainers.
2020-05-17Add new version of COSMA: 2.2.0 (#16672)Marko Kabic1-13/+10
* Updated versions of COSMA. * Added an empty line for formatting. * Switched to sha256. * Renamed gpu variant to cuda. Extending the CudaPackage base class.
2020-05-17r-spatstat-data: New package (#16688)Amjad Kotobi1-0/+21
2020-05-17r-rms: New package (#16683)Amjad Kotobi1-0/+48
* r-rms: New package * r-rms: deleted duplicated dependency * r-rms: deleting comma
2020-05-17r-spatialpack : New package (#16664)Amjad Kotobi1-0/+19
* r-spatialpack : New package * r-spatialpack : R dependeny added type * r-spatialpack: Description was missing
2020-05-16py-scipy: Fix build with gcc@10: (#16687)Michael Kuhn1-0/+5
2020-05-16py-fastcluster: new package at 1.1.26 (#16588)Justin S1-0/+18
* py-fastcluster: new package at 1.1.26 * py-fastcluster: add py-setuptools dep
2020-05-16r-yaimpute: New package (#16658)Amjad Kotobi1-0/+20
2020-05-16r-envstats: New package (#16659)Amjad Kotobi1-0/+26
2020-05-16New package frontistr (#16660)h-denpo1-0/+33
"""Open-Source Large-Scale Parallel FEM Program for Nonlinear Structural Analysis"""
2020-05-16r-spatstat-utils : New package (#16663)Amjad Kotobi1-0/+21
2020-05-16hpctoolkit: add dependency on gotcha (#16670)Mark W. Krentel1-0/+2
2020-05-16Add Go versions 1.14.3 and 1.13.11 (#16673)Paul1-0/+2
2020-05-16Add new package: hiredis (#16679)darmac1-0/+21
2020-05-16Add new package: guacamole-server (#16680)darmac1-0/+26
2020-05-16intel-mpi: add libfabrics directory to SPACK_COMPILER_EXTRA_RPATHS (#15214)TZ1-0/+9
workaround for not finding an appropriate libfabrics.so with Intel MPI 2019+. Fixes #11140 and #12493
2020-05-16r-polspline: new package (#16648)Amjad Kotobi1-0/+22
* r-polspline: new package * r-polspline: updated urls
2020-05-15fix catalyst so that it doesn't depend on a particular spelling of python ↵Omar Padron1-1/+7
(#16667)
2020-05-15modules: use projections format for naming schemes (#16629)Greg Becker15-62/+171
* update tcl naming_scheme to use projections * add projections to lmod modules
2020-05-15py-petsc4py: allow ~mpi variant (#16595)Stephen Hudson1-13/+16
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-05-15likwid: fix build with gcc@10: (#16641)Michael Kuhn1-0/+6
2020-05-15binutils: fix build with gcc@10: (#16661)Michael Kuhn1-0/+3
The issue seems to be fixed in the development version already.
2020-05-14Pipelines: Support DAG scheduling and dynamic child pipelinesScott Wittenburg7-301/+444
This change also adds a code path through the spack ci pipelines infrastructure which supports PR testing on the Spack repository. Gitlab pipelines run as a result of a PR (either creation or pushing to a PR branch) will only verify that the packages in the environment build without error. When the PR branch is merged to develop, another pipeline will run which results in the generated binaries getting pushed to the binary mirror.
2020-05-14Support os-specific $padding in config:install_treeScott Wittenburg2-11/+108
Providing only $padding or ${padding} results in an attempt to substitute a padding of maximum system path length, while leaving room for the parts of the install path spack generates. Providing $padding-<len> or ${padding-<len>} simply substitutes padding of the specified length.
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