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(#46573)
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* Add scikit-build-core version
* Update var/spack/repos/builtin/packages/py-scikit-build-core/package.py
Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
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Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
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* cuda: Add 12.6.2
* Update cuda build system
- Remove gcc@6 conflict that was only a deprecation (probably has be added again with cuda@13)
- Update cuda_arch support by CUDA version
- Kepler support has ended with cuda@12
- Recently added 90a Hopper "experimental" features architecture was
missing the dependency on cuda@12:
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Fixes bug introduced in #46788
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environment variable (#46774)
* su2 fixes and improvements: AD, scipy/numpy, and Mutationpp setup, environment variable
* su2: Conflict %gcc@13: when @:7, mpp was added with @7.1.0
* py-scipy: SciPy 1.14: requires GCC >= 9.1
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Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com>
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* py-cython: add v3.0.11
Add url for cython because they are using lower case for 3.0.11
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
* Don't use f-string
* Remove old version directive for 3.0.11
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Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
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Co-authored-by: U-PALLAS\boudaoud <boudaoud@pc44.pallas.cines.fr>
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Co-authored-by: Daryl W. Grunau <dwg@lanl.gov>
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* py-cartopy: add v0.24.1
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<3.13 (#46892)
petsc: fix missing tty import needed to print the warning.
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adds the lima-vm project, in order to make that useful adds a newer
version of qemu so qemu VMs can work, and builds qemu with flags that
allow it to do things like give the VMs networking and virtfs
filesystems.
Also adds vde as a dependency of qemu.
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Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com>
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Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
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* perl-sort-naturally: new package
Adds Sort::Naturally
* Use new mechanism for testing
* Make black happier
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* CMake: Improve incremental build speed.
CMake automatically embeds an updated configure step into make/ninja that will be called during the build phase. By default if a `CMakeCache.txt` file exists in the build directory CMake will use it and this + `spec.is_develop` is sufficient evidence of an incremental build.
This PR removes duplicate work/expense from CMake packages when using `spack develop`.
* Update cmake.py
* [@spackbot] updating style on behalf of psakievich
* Update cmake.py
meant self not spec...
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Co-authored-by: psakievich <psakievich@users.noreply.github.com>
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* fix typo in variable name in hepmc3 variant
* set cxx standard to 14 when using protobuf
* add myself to hepmc3 maintainer list
* hepmc3: Applied suggestion of @acecbs for spec.satisfies("+protobuf") (agreed!)
Co-authored-by: Alec Scott <hi@alecbcs.com>
* hepmc3: cxx_standard for protobuf
only set cxx standard to meet protobuf minimum (14) if not also rootio variant as that sets the cxx standard to match the root public API standard requirements
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* imagemagick: add v7.1.1-39
* [@spackbot] updating style on behalf of wdconinc
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Co-authored-by: wdconinc <wdconinc@users.noreply.github.com>
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Bumps [actions/checkout](https://github.com/actions/checkout) from 4.2.0 to 4.2.1.
- [Release notes](https://github.com/actions/checkout/releases)
- [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md)
- [Commits](https://github.com/actions/checkout/compare/d632683dd7b4114ad314bca15554477dd762a938...eef61447b9ff4aafe5dcd4e0bbf5d482be7e7871)
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updated-dependencies:
- dependency-name: actions/checkout
dependency-type: direct:production
update-type: version-update:semver-patch
...
Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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* added adept package
* forgot to remove boilerplate comment
* fixed formatting issue and use of lapack_prefix
* adept: use f-string
* removed debug variant and corresponding configure_args conditional
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Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
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* Environment.clear: ensure clearing is passed through to manifest
* test/cmd/env: make test_remove_commmand round-trip to disk
* cleanup vestigial variables
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Some Windows Python installations may store the Python exe in Scripts/
rather than the base directory. Update `.command` to search in both
locations on Windows. On all systems, the search is now done
recursively from the search root: on Windows, that is the base install
directory, and on other systems it is bin/.
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* Add libALL support
* cabana: also require ALL
* cabana: Bugfix: Fix spec for cmake>=3.26 to be @3.26: and HDF5 support requires MPI
* cabana: MPI requires C: Add depends_on("c", type="build", when="+mpi")
* cabana: +mpi requires C, but at least for some CMake versions, Cabana's enable of C is too late. Patch it.
* cabana: simplify disabling of find_package's for disabled options and improve comment
* cabana: +grid of 0.6.0 does not compile with gcc-13: It misses iostream includes
* cabana: +test requires googletest at build time: gtest is a linked library(not a plugin or tool)
* cabana: 0.6.0+cuda requires kokkos@3.7:, see https://github.com/ECP-copa/Cabana/releases
* cabana: As 0.6.0+grid does not support gcc-13 and newer, I think it's good to add 0.6.1 and 0.7.0?
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Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com>
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* resolve: Add LUSOL variant and fix CMake variable definition.
* Update variant with correct version constraints.
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* added py-evodiff and dependencies
* deleted the FIXME
* fixed style issues
* added versions for biotite dependencies; added hash to py-hatch-vcs
* added python version for py-hatch-cython
* updated biotraj dependencies
* - added versions for the packages and dependencies
- added more dependencies for py-hatch
- added rust versions
- added py-uv as a new package
* updated pacakges and their dependencies according to the PR review by @meyersbs
* typo fix for hatchling version; fix the minimum required setuptools version for evodiff
* added 1.9.0 and 1.7.0 userpath versions; required as a dependency
* added mlflow as a dependency
* changed biopython to an optional dependency according to review from @meyersbs; variant esmfold
* Updated Specs
- Pinned biotraj to 1:1 for py-biotite
- Added numpy and other dependencies for py-biotraj; they are dependent
on the versions
- Excluded py-mlflow as a dependency for package py-evodiff; missing
usage in
package.
- Removed versioned dependencies from py-fair-esm
- Added a version to py-packaging
- Added py-setuptools as a dependency in py-userpath
- Added sha256 as hashes for py-uv
* style changes
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Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
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* Remove "modify_object_macholib"
According to documentation, this function is used when installing
Mach-O binaries on linux. The implementation seems questionable at
least, and the code seems to be never hit (Spack currently doesn't
support installing Mach-O binaries on linux).
* Fix relocation on macOS, when store projection changes
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Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
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* [py-torchmetrics]
- Added variant
- deprecated version 1.3.0
* [py-torchmetrics]
- py-scipy@1.0.1:
- removed upper bounds on dependencies
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* py-cartopy: add v0.24.0
* py-owslib: add v0.31.0
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