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Co-authored-by: Prasanthi <pdonthir@amd.com>
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* new package: r-glmgampoi
* Remove duplicate depends_on directive
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- r-bluster
- r-metapod
- r-scran
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* [ycsb] fixes build process and installation of YCSB
* [ycsb] fixing style
* [ycsb] removed extra newline
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* ddt: Initial commit
* ddt: Minor change to license date to appease the CI gods
* Get rid of unattractive extra line
* Switch to sha256 instead of md5
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* Initial Draft of E3SM-Kernels Spackage
Initial draft of E3SM-Kernels. Currently no support for nested_loops due
to build system limitations
* Style Check and Fixed gfortran Check
Fixed style issues and changed gnu toolchain check to a gfortran check
due to hybrid compilers (e.g. clang+gfortran)
* Fixed Style Issues
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LAMMPS' setup.py uses setuptools as of lammps/lammps@2ed8e5cf022
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* tixi: new variants (fortran,shared)
Since some tixi 3 versions, additional CMake flags are needed to build
tixi with shared libraries, respectively with Fortran support.
* tixi: fix style
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* Changes for ROCm-5.2.0 changes and new recipe rocwmma
* modify the maintainers for hipify-clang
* address review comments
* update the rocwmma new recipe as per latest syntax
* fix style errors
* modify the patch file to provide the details about the patch
* fix style errors
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* Match main version.
`develop` no loger exists.
* Change develop to main.
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* cplex: add package.py
* Update var/spack/repos/builtin/packages/cplex/package.py
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
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fixes #32348
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* whizard: Fix passing of build options, update versions
The dependency of whizard on libtirpc is now correctly passed down as
an autotools option.
Update known versions of package with 3.0.2 and 3.0.3.
* Express path to headers via spec object methods
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Co-authored-by: Yuichi Otsuka <otsukay@riken.jp>
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
Co-authored-by: otsukay <otsukay@users.noreply.github.com>
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Allow users to express default requirements in packages.yaml.
These requirements are overridden if more specific requirements
are present for a given package.
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* New package: py-griffe and new build backend: py-pdm-pep517
* add pdm to build backend docs
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Some programs such as `minccalc` depend on libfl.so at runtime.
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* [WRF] Update to version 4.4.
* [WRF] Patches for v4.4.
* Fixing style.
* [@spackbot] updating style on behalf of t-brown
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* Add new package for MUST runtime correctness analysis tool
* Fix encryption to SHA256 to fix with spack convention.
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* `spack -e x config --scope=y add z` add to scope
instead of to the environment file.
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* cpu-features: fix fetch failure
`master` branch was renamed to `main`
* Update var/spack/repos/builtin/packages/cpu-features/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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* Fix intel-oneapi-compilers-classic bin path
* Update package.py
* intel-oneapi-compilers-classic fix path
Co-authored-by: OfirGan <offirgan@gmail.com>
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This variable is used by some programs both internal and external to the
toolkit itself to discover shared objects, data, etc.
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compiler (#32142)
* py-numpy: Change Fortran detect order for Fujitsu Compiler.
* create setup.cfg instead of command line.
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* [py-loguru] New package
* [py-loguru] Removed commented out line
* [py-loguru] Added types removed extra dependencies
* [py-loguru] missing windows dependency. listing windows as a conflict for now
* [py-loguru] depends on py-colorama when platform=windows
* [py-loguru] flake8
* [py-loguru] Import update
* [py-loguru]
- python is a runtime dependency
- setuptools is a build dependency
* [@spackbot] updating style on behalf of qwertos
Co-authored-by: James A Zilberman <jazrc@rit.edu>
Co-authored-by: qwertos <qwertos@users.noreply.github.com>
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* [py-python-javabridge] New package
* [py-python-javabridge] Added dependencies
* [py-python-javabridge] Added types
* [py-python-javabridge] py-setuptools and java are dependencies
* [py-python-javabridge] Import update
* [@spackbot] updating style on behalf of qwertos
Co-authored-by: James A Zilberman <jazrc@rit.edu>
Co-authored-by: qwertos <qwertos@users.noreply.github.com>
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* libfabric: add new versions
1.15.0, 1.15.1, main (previously named master)
* Add OPX fabric option, with conflict for versions before v1.15.0
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
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Taken from CMakePackage
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* geant4: use define function
* geant4: Change new feature from conflicts to when
* geant4: add support/conflicts for nvhpc
* fixup! geant4: add support/conflicts for nvhpc
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gfortran can make it with O3, it might be better to remove this limitation.
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Co-authored-by: Hadrien G. <knights_of_ni@gmx.com>
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This support requires adding the '--tests' option to 'spack ci rebuild'.
Packages whose stand-alone tests are broken (in the CI environment) can
be configured in gitlab-ci to be skipped by adding them to
broken-tests-packages.
Highlights include:
- Restructured 'spack ci' help to provide better subcommand summaries;
- Ensured only one InstallError (i.e., installer's) rather than allowing
build_environment to have its own; and
- Refactored CI and CDash reporting to keep CDash-related properties and
behavior in a separate class.
This allows stand-alone tests from `spack ci` to run when the `--tests`
option is used. With `--tests`, stand-alone tests are run **after** a
**successful** (re)build of the package. Test results are collected
and report(able) using CDash.
This PR adds the following features:
- Adds `-t` and `--tests` to `spack ci rebuild` to run stand-alone tests;
- Adds `--fail-fast` to stop stand-alone tests after the first failure;
- Ensures a *single* `InstallError` across packages
(i.e., removes second class from build environment);
- Captures skipping tests for externals and uninstalled packages
(for CDash reporting);
- Copies test logs and outputs to the CI artifacts directory to facilitate
debugging;
- Parses stand-alone test results to report outputs from each `run_test` as
separate test parts (CDash reporting);
- Logs a test completion message to allow capture of timing of the last
`run_test` part;
- Adds the runner description to the CDash site to better distinguish entries
in CDash tables;
- Adds `gitlab-ci` `broken-tests-packages` to CI configuration to skip
stand-alone testing for packages with known issues;
- Changes `spack ci --help` so description of each subcommand is a single line;
- Changes `spack ci <subcommand> --help` to provide the full description of
each command (versus no description); and
- Ensures `junit` test log file ends in an `.xml` extension (versus default where
it does not).
Tasks:
- [x] Include the equivalent of the architecture information, or at least the host target, in the CDash output
- [x] Upload stand-alone test results files as `test` artifacts
- [x] Confirm tests are run in GitLab
- [x] Ensure CDash results are uploaded as artifacts
- [x] Resolve issues with CDash build-and test results appearing on same row of the table
- [x] Add unit tests as needed
- [x] Investigate why some (dependency) packages don't have test results (e.g., related from other pipelines)
- [x] Ensure proper parsing and reporting of skipped tests (as `not run`) .. post- #28701 merge
- [x] Restore the proper CDash URLand or mirror ONCE out-of-band testing completed
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