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* aegean: new package
* genometools: set dependent env for aegean
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* A new package: kaiju.
* Replace ftp:// with https://.
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* new file: package.py
* corrected using pep8online.com
* Update package.py
* correct typo
* as requested
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* modified: package.py
* add official build reference.
* Update package.py
* Update package.py
* Update package.py
* fixed with pep8online.com
* update make to make()
* change homepage
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* added the +numpy variant which enables building the libboost_numpy libraries
* Update package.py
Added `type=('build', 'run')`
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* Create custom PATH that texlive requires in its module.
* Updating texlive to 2018 distribution.
* Using platform instead of sys for easier portability across linux and osx.
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* plink: new source version 1.9-beta5
* plink: replace version 1.9 with 1.07
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* Add package for "bumpversion"
bumpversion is a tool that automagically increments version numbers
for projects. It can update files and do other magic along the way.
* Remove py- package prefix and use pypi.io URL
Renamed the package 'bumpversion'.
Fetch the package from pypi.io.
* Add version info for bumpverion@0.5.3
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* r-cdcfluview: new package
* updated package.py
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Signed-off-by: Howard Pritchard <howardp@lanl.gov>
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* masurca: new version
* masurca: reorder versions
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Fixes #8088
#7012 added a @when condition for a @run_before check to constrain
that check to only run on Darwin. @when is intended to be used to
choose one of several different implementations of a given function
and cannot be used to conditionally deactivate a check altogether.
This replaces the external decorator with a check that executes at
the beginning of the function.
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* dealii: disable tpetra when +cuda; check for '' in cuda_arch
* trilinos: fix Kokkos CUDA
* Revert "trilinos: fix Kokkos CUDA"
This reverts commit 6aae894bc7d49c9e736c06f65b81b8c219443920.
* update according to @aprokop comments
* minor
* fix flake8
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* gmsh: add netgen and tetgen
dealii: require gmsh+netgen+tetgen
netgen: use http instead of https
* dealii: add oce requirement to gmsh
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For Spectrum MPI, if -np is omitted, the default behavior is to
assign one process per process slot, where the default process slot
allocation is one per core. On systems with many cores, the number
of processes can exceed the size of the grid specified when the
testcase is run and the test case fails. This specifies a small
number of processes when running the test case to prevent failure.
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* stop cmake from picking up /usr paths if spack has corresponding packages
Change-Id: I7217122562697c7a642cded2b4bfb606d2e35ffb
* add libpcap dependency
Change-Id: If0d5c2c94b2c2d1cbb9b19e31e44f870b71ba88b
* make cmake actually pick up pcap
Change-Id: I67b87fd9282c26f5ff4e0a5aedd8bbbae39a5960
* add libtool build dependency
Change-Id: I5c6d14dca7ccbe457318903dd170bb19d004e952
* use .libs for pcap
Change-Id: Ibe78f8765524385f9da4a8f9963f2c61632cc9f7
* explicitly add bison build dependency
Change-Id: I47112778abdf4c0de81789685a7eca4dddb20f77
* add lua explicitly
Change-Id: I8e306e1e4cfa0e16138f3a5109ddcfe912120946
* fix libs usage
Change-Id: I8c1e03f10df69e3ef74326a13cacaf0e5498e6aa
* add minimal version requirement
Change-Id: I4dd181389f9a63067df541b982bc0727f974d4ce
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* Add new Sundials versions, update minimum cmake version required
* specify which versions require a newer cmake
* revise cmake dependency
* remove develop, add 4.0.0-dev version
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* Add 3.5.2; Add optional cpp implementation enable for py-protobuf
* Make flake8 happy
* Give all required install_args
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* perl-extutils-pkgconfig: Add pkg-config dependency
* perl-extutils-pkgconfig: fix build dependency
* perl-extutils-pkgconfig: fix build dependency
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* llvm+lldb plaform=darwin: check for lldb_codesign
Building LLVM with LLDB requires that the "lldb_codesign" code
certificate be created (see
https://llvm.org/svn/llvm-project/lldb/trunk/docs/code-signing.txt for
details). This commit checks for this certificate on Darwin if LLDB is
to be built, and returns an informative error message if this
certificate is unavailable.
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Add variants to control building of many 3rd-party modules in opencv.
They are enabled by default, which matches the defaults chosen by
opencv when these options are not set explicitly. This also updates
the lbann opencv dependency to disable most of these new variants by
default in order to build faster.
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Fixes #2781
This PR introduces a new attribute for packages called
`archive_files`, which designates files that should be saved from
a package build (e.g. the config.log generated during autotools
builds).
The attribute contains a list of glob expressions; Any file that
matches will be archived in the `<prefix>/.spack/archived-files`
directory. Errors that occur when archiving files are collected and
reported in a file named `<prefix>/.spack/archived-files/errors.txt`.
`AutotoolsPackage` and `CMakePackage` provide a sensible default
override for this attribute.
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* py-pyfaidx: adding new package
* updating the url
* identifying dependencies
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- Adds v1.3.0 and v1.4.0
- List explicit CMake version dependency (from Benchmark CMake files)
- Disable the building of tests. Starting in v1.4.0 this introduced a dependency on GoogleTest
Tested by building all versions on macOS High Sierra
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* pybind11: 2.2.3
new release for pybind11, v.2.2.3:
https://github.com/pybind/pybind11/blob/v2.2.3/docs/changelog.rst#v223-april-29-2018
* pybind11: compiler support
mark older versions as conflicts
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Add Google Test variant to enable/disable building with threads.
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* manta: Create new package
* manta: Create new package
* manta: fix dependency types
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* perl: add 5.26.2
* perl: add 5.22.4
* move Misc releases to EOL
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