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2024-10-16adding latest AMR-Wind versions and correcting 2.1.0 reference (#46954)Michael B Kuhn1-1/+61
2024-10-16krb5: add v1.21.3 (fix CVEs) (#46989)Wouter Deconinck1-16/+41
* krb5: add 1.21.3 * krb5: fix style * [@spackbot] updating style on behalf of wdconinc --------- Co-authored-by: wdconinc <wdconinc@users.noreply.github.com>
2024-10-16hive: add v4.0.1 (#46995)Wouter Deconinck1-4/+7
2024-10-16yara: add v4.5.2 (fix CVE) (#46998)Wouter Deconinck1-1/+5
* yara: add v4.5.2 * yara: deprecate 3.9.0
2024-10-16sqlcipher: add v4.6.1 (#47000)Wouter Deconinck1-8/+12
2024-10-16abinit: add v10.0.9 (#46923)downloadico1-7/+15
Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com> Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
2024-10-16py-metpy: add v1.6.2 (#46990)Chris Marsh1-15/+42
* Add v1.6.2 * Add variant desc * fix style
2024-10-15Reduce noop job resource requests (#46920)Caetano Melone1-2/+2
`no-spec-to-rebuild` jobs use far less resources than they request. For example, [this](https://gitlab.spack.io/spack/spack/-/jobs/12944487) job [used](https://prometheus.spack.io/api/v1/query_range?query=container_memory_working_set_bytes{pod=%22runner-dcsgp53u-project-2-concurrent-3-0ubclrr1%22}&start=1728655743&end=1728656543&step=1s) around 3MB. While this won't lead to any crazy cost savings, k8s requests effectively block other jobs from using the resources, so reducing this to a reasonable number is important.
2024-10-15remove concrete spec constraint from `spack develop` (#46911)psakievich4-13/+25
Remove the constraint for concrete specs and simply take the max(version) if a version is not given. This should default to the highest infinity version which is also the logical best guess for doing development. * Remove concrete verision constriant for develop, set docs * Add unit-test * Update lib/spack/docs/environments.rst Co-authored-by: kwryankrattiger <80296582+kwryankrattiger@users.noreply.github.com> * Update lib/spack/spack/cmd/develop.py Co-authored-by: Greg Becker <becker33@llnl.gov> * Consolidate env collection in cmd * Style --------- Co-authored-by: kwryankrattiger <80296582+kwryankrattiger@users.noreply.github.com> Co-authored-by: Greg Becker <becker33@llnl.gov>
2024-10-15Changing github branch name (#46988)G-Ragghianti1-1/+1
2024-10-15(py-)fenics-dolfinx: add v0.9.0 (#46987)Garth N. Wells2-5/+18
* Update fenics-dolfinx to v0.9 * py-fenics-dolfinx update to v0.9 * Small updates * Small fix
2024-10-15py-jupyter-server: add v2.14.2 (fix CVEs) (#46965)Wouter Deconinck4-9/+41
* py-jupyter-server: add v2.14.2 * [@spackbot] updating style on behalf of wdconinc * py-jupyter-events: add v0.10.0 * py-send2trash: add v1.8.3 * py-websocket-client: add v1.6.4, v1.7.0, v1.8.0 * py-websocket-client: back to underscore in source tarball --------- Co-authored-by: wdconinc <wdconinc@users.noreply.github.com>
2024-10-15`gimp`: Fix missing pkgconfig and gettext dependencies (#46912)Bernhard Kaindl6-11/+35
* gimp deps: Fix missing pkgconfig and gettext deps * Let's mark @:2.10.32 as deprecated and remove after 0.23 is released.
2024-10-15env depfile: generate Makefile with absolute script path (#46966)Tobias Ribizel3-6/+19
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2024-10-15acts dependencies: new versions as of 2024/10/15 (#46981)Stephen Nicholas Swatman3-0/+3
This commit adds a new version of ACTS, detray, and GeoModel.
2024-10-15support python 3.13 bootstrapping from sources (#46983)Harmen Stoppels2-14/+10
2024-10-15python: drop build-tools tag (#46980)Harmen Stoppels1-1/+1
Remove the `build-tools` tag of python, otherwise these types of concretizations are possible: ``` py-root ^py-pip ^python@3.12 ^python@3.13 ``` So, a package would be configured with py-pip using python 3.12, but installed for 3.13, which does not work.
2024-10-15Improve behavior of `spack deprecate` (#46917)Massimiliano Culpo2-0/+36
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-10-14tempo: add master (#44298)Tony Weaver1-4/+49
* Add new version for master branch Added new version for master branch. Also added additional functions to ensure tempo will actually run. Tempo assumes the stage directory sticks around and references numerous files and directory there. That has been corrected here only if using the master version. The LWA-10-2020 version will also have this problem but they may have additional setup in their compute/Spack environment to address this issue already so I did not modify anything when that's the version. Example of what happens in the LWA-10-17-2020 version regarding missing files is given below user@cs:~/spack/bin$ tempo more: cannot open /tempo.hlp: No such file or directory * Updated to fix format errors Flake8 check found errors. Fixed those formatting issues * Additional format change Removed redundant setup_dependent_run_environment missed in previous update * Update url to use https: https is the usual transport and is needed to support checkout behind some firewalls --------- Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com>
2024-10-14Don't require OIDC initialization for noop (#46921)kwryankrattiger2-1/+2
ref. https://github.com/spack/spack-infrastructure/pull/957
2024-10-15Docs: reduce confusion in configuration override of scope precedence section ↵Tamara Dahlgren1-1/+1
(#46977)
2024-10-14lucene: add v9.12.0, v10.0.0 (fix CVE) (#46975)Wouter Deconinck1-10/+23
* lucene: add v9.12.0, v10.0.0 * [@spackbot] updating style on behalf of wdconinc --------- Co-authored-by: wdconinc <wdconinc@users.noreply.github.com>
2024-10-14libmodbus: add v3.1.10 (fix CVE) (#46968)Wouter Deconinck1-11/+14
* libmodbus: add v3.1.10 * libmodbus: deprecate older versions
2024-10-14libsndfile: add v1.2.2 (fix CVEs) (#46967)Wouter Deconinck1-3/+20
* libsndfile: add v1.2.2 * [@spackbot] updating style on behalf of wdconinc --------- Co-authored-by: wdconinc <wdconinc@users.noreply.github.com>
2024-10-14log4cxx: add v1.2.0 (#46974)Wouter Deconinck1-6/+29
2024-10-15istio: add v1.23.2 (fix CVEs) (#46961)Wouter Deconinck1-1/+11
2024-10-14keepalived: add v2.3.1 (#46963)Wouter Deconinck1-1/+3
2024-10-14Change URLs from http to https in curl and openssl. (#46962)Jon Rood2-4/+2
2024-10-15Add fenics-ufcx to v0.9 (#46952)Garth N. Wells1-0/+1
2024-10-15GDAL: add v3.9.3 (#46959)Adam J. Stewart1-0/+1
2024-10-14detection: prefer dir instead of symlink in case of duplicate search paths ↵Harmen Stoppels2-3/+43
(#46957)
2024-10-14archspec: update to v0.2.5 (#46958)Massimiliano Culpo3-10/+96
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-10-14cmake: remove custom CMAKE_INSTALL_RPATH (#46685)Harmen Stoppels8-86/+52
The CMake builder in Spack actually adds incorrect rpaths. They are unfiltered and incorrectly ordered compared to what the compiler wrapper adds. There is no need to specify paths to dependencies in `CMAKE_INSTALL_RPATH` because of two reasons: 1. CMake preserves "toolchain" rpaths, which includes the rpaths injected by our compiler wrapper. 2. We use `CMAKE_INSTALL_RPATH_USE_LINK_PATH=ON`, so libraries we link to are rpath'ed automatically. However, CMake does not create install rpaths to directories in the package's own install prefix, so we set `CMAKE_INSTALL_RPATH` to the educated guess `<prefix>/{lib,lib64}`, but omit dependencies.
2024-10-14py-greenlet: add missing forward compat bound for python (#46951)Harmen Stoppels1-2/+3
2024-10-14Add "only_windows" marker for unit tests (#45979)John W. Parent4-12/+17
2024-10-13tomcat: add v9.0.96, v10.1.31, v11.0.0 (fix CVEs) (#46950)Wouter Deconinck1-8/+33
* tomcat: add v9.0.96, v10.1.31, v11.0.0 * [@spackbot] updating style on behalf of wdconinc --------- Co-authored-by: wdconinc <wdconinc@users.noreply.github.com>
2024-10-13tecplot: Add version 2024r1 (#46469)Laura Weber1-0/+5
2024-10-13Fix makefile target check with Make jobserver keep-going (#46784)Jordan Galby1-4/+13
2024-10-13Update to ffcx v0.9.0 (#46949)Garth N. Wells1-2/+3
2024-10-13Sort FORTRAN std when using flang (#46922)AMD Toolchain Support1-0/+7
2024-10-13guacamole-{client,server}: add v1.5.5 (fix CVEs) (#46948)Wouter Deconinck2-4/+20
* guacamole-client: add v1.5.5 * guacamole-server: add v1.5.5 * guacamole-client: add patch and ensure maven doesn't flag it * guacamole-client: limit patch to 1.5; java@:16 when @:1.4
2024-10-13GDAL: fix Autotools build (#46946)Adam J. Stewart1-1/+1
2024-10-13systemd: add v256.7 (#46944)Wouter Deconinck1-0/+1
2024-10-13libde265: add v1.0.15 (fix CVEs) (#46942)Wouter Deconinck1-1/+1
Co-authored-by: Bernhard Kaindl <contact@bernhard.kaindl.dev>
2024-10-13perl-*: add new versions (#46935)Wouter Deconinck22-14/+145
* perl-*: add new versions * [@spackbot] updating style on behalf of wdconinc * perl-task-weaken: depends on perl-module-install --------- Co-authored-by: wdconinc <wdconinc@users.noreply.github.com>
2024-10-13libepoxy: add v1.5.10 (switch to meson) (#46938)Wouter Deconinck1-3/+38
2024-10-13(py-)fenics-basix: add v0.9.0 (#46931)Garth N. Wells2-4/+11
2024-10-13py-fenics-ufl: add v2024.2.0 (#46933)Garth N. Wells1-0/+1
2024-10-13ftgl: Fix gcc14 compilation error due to type mismatch in FTContour (#46927)Joseph Wang1-0/+6
* ftgl: add type fix * ftgl: fix style * Add comment: Fix gcc14 compilation error due to type mismatch in FTContour Co-authored-by: Wouter Deconinck <wdconinc@gmail.com> --------- Co-authored-by: Wouter Deconinck <wdconinc@gmail.com> Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com>
2024-10-13[intel-oneapi-compilers] use llvm flags for ifx (#46866)Robert Cohn1-1/+5