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2023-04-11Update opencoarray to v2.10.1 and fgsl to v1.5.0 (#36626)Nisarg Patel2-0/+11
2023-04-11Remove a unit-test that monkey-patches os.stat (#36757)Harmen Stoppels1-42/+0
"test_create_stage_root_bad_uid" started failing as pytest updated to v7.3.0
2023-04-10ci: gpu-tests stack: swap x86_64-{cuda,rocm} for x86_64 (#36759)eugeneswalker1-2/+6
2023-04-10r-caretensemble: add v2.0.2 (#36742)Alec Scott1-0/+1
2023-04-10Ci backwards compat (#36045)kwryankrattiger7-25/+433
* CI: Fixup docs for bootstrap. * CI: Add compatibility shim * Add an update method for CI Update requires manually renaming section to `ci`. After this patch, updating and using the deprecated `gitlab-ci` section should be possible. * Fix typos in generate warnings * Fixup CI schema validation * Add unit tests for legacy CI * Add deprecated CI stack for continuous testing * Allow updating gitlab-ci section directly with env update * Make warning give good advice for updating gitlab-ci * Fix typo in CI name * Remove white space * Remove unneeded component of deprected-ci
2023-04-10r-gsodr: add v3.1.8 (#36746)Alec Scott1-0/+1
2023-04-10r-conquer: add v1.3.3 (#36743)Alec Scott1-0/+1
2023-04-10r-data-table: add v1.14.8 (#36744)Alec Scott1-0/+1
2023-04-10r-cachem: add v1.0.7 (#36741)Alec Scott1-0/+1
2023-04-10r-ff: add v4.0.9 (#36745)Alec Scott1-0/+1
2023-04-10r-blob: add v1.2.4 (#36740)Alec Scott1-0/+1
2023-04-10r-intervals: add v0.15.3 (#36727)Alec Scott1-0/+1
2023-04-10armadillo: add new version 12.2.0 (#36755)snehring1-0/+1
2023-04-10krb5, xrootd: Make usable with OpenSSL 3 (#36728)Thomas Madlener2-2/+4
2023-04-09zstd: add 1.5.5 (#36717)Michael Kuhn1-0/+1
2023-04-09py-wheel: Add dependency on python+ctypes (#36716)Jonathon Anderson1-0/+1
2023-04-08cuDNN: LD_LIBRARY_PATH required (#36466)Adam J. Stewart1-0/+9
2023-04-07spectre: add v2023.04.07 (#36704)SXS Bot1-0/+3
Co-authored-by: sxs-bot <sxs-bot@users.noreply.github.com>
2023-04-07Automated deployment to update package flux-pmix 2023-04-07 (#36700)Vanessasaurus1-4/+18
* Automated deployment to update package flux-pmix 2023-04-07 * fix style Signed-off-by: vsoch <vsoch@users.noreply.github.com> --------- Signed-off-by: vsoch <vsoch@users.noreply.github.com> Co-authored-by: github-actions <github-actions@users.noreply.github.com> Co-authored-by: vsoch <vsoch@users.noreply.github.com>
2023-04-07wayland: new version 1.22 (#36694)Wouter Deconinck1-0/+1
No build system changes compared to the previous release, https://gitlab.freedesktop.org/wayland/wayland/-/compare/1.21.0...1.22.0
2023-04-07Windows support: correct 64-bit check (#36578)John W. Parent6-6/+6
2023-04-07cppzmq: new versions 4.8.1, 4.9.0 (updated cmake dependency) (#36699)Wouter Deconinck1-0/+5
* cppzmq: new versions 4.8.1, 4.9.0 (updated cmake dependency) No important changes in the build system, https://github.com/zeromq/cppzmq/compare/v4.7.1...v4.9.0, other than the more recent cmake required starting with 4.8.0. There is also a patch version 4.8.0, but presumably 4.8.1 is preferred. * cppzmq: add maintainer
2023-04-07lammps: add missing hipfft dependency (#36697)Richard Berger1-0/+1
2023-04-07Fix incorrect reformatting of spack.yaml (#36698)Massimiliano Culpo3-55/+101
* Extract a method to warn when the manifest is not up-to-date * Extract methods to update the repository and ensure dir exists * Simplify further the write method, add failing unit-test * Fix the function computing YAML equivalence between two instances
2023-04-06Ecp hdf5 vol (#35195)kwryankrattiger6-8/+43
* ECP-SDK: enable hdf5 VOL adapters - When +hdf5, enable VOL adapters suitable for the SDK. - Each VOL package must prepend to the HDF5_PLUGIN_PATH. - hdf5: 1.13.3 will break existing VOL packages, constrain VOLs related to SDK and add note to keep 1.13.2 available. - hdf5-vol-async: - Do not set HDF5_VOL_CONNECTOR, consumers must opt-in. - Enforce DAG constraints on MPI to require threaded version. - Depend on an explicit version of argbots to relax concretization issues in other spack environments. - paraview: fix compiler flag usage for the 110 ABI (followup to #33617). * ECP Data and ViS: Add constraits for HDF5 VOLS * CI: HDF5 1.14 builds without VisIt * hdf5-vol-async: Update docs string --------- Co-authored-by: Stephen McDowell <stephen.mcdowell@kitware.com>
2023-04-06Packages/ophidia server (#36632)SoniaScard1-3/+3
* ophidia-server: new package at v1.7 * Merge * Update package.py Fix style in package.py * Fix maintainers syntax --------- Co-authored-by: SoniaScard <SoniaScard@users.noreply.github.com>
2023-04-06abseil-cpp: add v20230125.2 (#36636)Adam J. Stewart1-7/+12
2023-04-06ParaView: add latest release v5.11.1 (#36577)kwryankrattiger1-3/+4
* ParaView: add latest release v5.11.1 * ParaView: No longer need XDMF patch after 5.11.1
2023-04-06manually add mpi home to testing (#36633)Miroslav Stoyanov1-0/+3
2023-04-06Fix py-torch build on Linux >=6.0.3 (#35983)Jonathon Anderson1-0/+9
* Fix py-torch build on Linux >=6.0.3 * Update var/spack/repos/builtin/packages/py-torch/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-04-06py-grpcio: add v1.52.0 (#36637)Adam J. Stewart1-4/+2
2023-04-06py-portpicker: add new package (#36638)Adam J. Stewart1-0/+18
2023-04-06ParaView: Add variant for raytracing (#36640)kwryankrattiger1-0/+10
* ParaView: Add variant for raytracing * [@spackbot] updating style on behalf of kwryankrattiger
2023-04-06root: depends_on vc@1.3.0: (open-ended) (#36663)Wouter Deconinck1-1/+2
2023-04-06Automated deployment to update package flux-core 2023-04-06 (#36676)Vanessasaurus1-0/+1
Co-authored-by: github-actions <github-actions@users.noreply.github.com>
2023-04-06Spack on Windows: spack.bat comment syntax (#36531)John W. Parent1-19/+19
Comments must start with `rem` in most cases.
2023-04-06veloc/scr component releases (#36672)Cameron Stanavige7-2/+27
VeloC/SCR component releases needed for upcoming VeloC release. * AXL v0.8.0 * ER v0.4.0 * KVTree v1.4.0 * Rankstr v0.3.0 * Redset v0.3.0 * Shuffile v0.3.0 * Spath v0.3.0 Added some dependency compatibility restraints as the new componenet versions have a change to how their cmake config works.
2023-04-06spack install: fail if --log-file and not --log-format (#36684)Massimiliano Culpo1-0/+4
fixes #34551 "spack install" now fails if a user passed the --logfile option without specifying a log format.
2023-04-06GNINA: add cuDNN variant and make RDKit optional (#36270)Rocco Meli2-5/+10
* add cuDNN variant and make RDKit optional * [@spackbot] updating style on behalf of RMeli * add newer version of rdkit --------- Co-authored-by: RMeli <RMeli@users.noreply.github.com>
2023-04-06singularity: deprecate all versions pre-fork, remove maintainer (#36654)Massimiliano Culpo1-24/+105
2023-04-06crmc: add v2.0.1 (#36236)Alec Scott1-55/+56
Hint: The diff for this file is large because it initially had CRLF (DOS) eol style.
2023-04-05intel-oneapi-openvpl-2023.1.0 (#36668)Andrey Perestoronin1-0/+6
2023-04-05intel 2023.1.0 release fix versioning (#36665)Andrey Perestoronin11-11/+11
2023-04-05[py-mizani] added version 0.8.1 (#36500)Jen Herting1-0/+6
2023-04-05openPMD-api: 0.15.1 Patch version.hpp (#36662)Axel Huebl1-0/+7
Forgot to bump a version in the public header during release.
2023-04-05New package: py-qiskit-ibm-provider and more (#36661)Jen Herting5-1/+87
* [py-singledispatchmethod] new package * [py-singledispatchmethod] added missing dependency * new package required for qiskit * [py-rustworkx] - removed redundant dependency on py-wheel - added dependency on py-numpy * [py-websocket-client] added version 1.5.1 * modified it is ahead of upstream * [py-qiskit-terra] - flake8 - removed duplicate dependencies - fixed acceptable range for py-symengine * [py-qiskit-terra] tweedledum no longer needed * [py-qiskit-terra] depends on py-singledispatchmethod * [py-qiskit-ibm-provider] new package --------- Co-authored-by: Sid Pendelberry <sid@rit.edu>
2023-04-05archspec: add v0.2.0, deprecate old versions (#36653)Massimiliano Culpo1-14/+34
* archspec: add v0.2.0, deprecate old versions * Simplify version ranges Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Remove py-setuptools --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-04-05Update archspec to HEAD of develop (#36657)Massimiliano Culpo3-12/+62
2023-04-05[py-backports-zoneinfo] New package (#36499)Jen Herting1-0/+17
* [py-backports-zoneinfo] New package * [py-backports-zoneinfo] removed references to python 3.6
2023-04-05gromacs: add cufftmp variant to enable distributed PME when using CUDA (#36552)Daniel Ahlin1-0/+10
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>