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2021-01-06intel-oneapi-compilers package: correct module file (#20686)Frank Willmore1-0/+10
This properly sets PATH/CPATH/LIBRARY_PATH etc. to make the Spack-generated module file for intel-oneapi-compilers useful (without this, 'icx' would not be found after loading the module file for intel-oneapi-compilers).
2021-01-06fix mpi lib paths, add virtual provides (#20693)Robert Cohn4-0/+21
2021-01-06Remove hard-coded standard C++ library selection and add more releases in ↵Ye Luo1-2/+2
llvm package (#19933) * Restore OS based Clang default choice of C++ standard library. * Add LLVM 11.0.1 release
2021-01-06parallelio: New Package. (#20673)Toyohisa Kameyama1-0/+42
2021-01-06libc: Return empty libs (#20338)Dr. Christian Tacke1-1/+5
The C-Library for the current compiler should already be used by the compiler. So there is no point in returning any libs for this package. Without this patch: if one uses this as an external package (as intended), then this will can inject system library paths into the build process at the wrong place.
2021-01-06magma: remove -W args from CMakeLists.txt when using nvhpc (#20516)jkelling2-0/+13
2021-01-06arrayfire: added v3.7.3 (#20612)Erik Schnetter1-0/+1
2021-01-06libtheora: fetch a patch instead of storing it in Spack (#20620)Rémi Lacroix2-20/+3
2021-01-06Blitz: added v1.0.2 (#20614)Rémi Lacroix1-1/+5
2021-01-06mfem: link to nveccuda when +sundials+cuda (#20588)Josh Essman1-0/+2
2021-01-06r-genefilter: added v1.72. (#20627)Rémi Lacroix1-1/+3
2021-01-06Nek5000: Improve support for OpenMPI without legacy launchers. (#20622)Rémi Lacroix1-0/+5
Use "srun" for the nekmpi wrapper when we know "mpiexec" won't be available.
2021-01-06Gromacs: simplify hwloc dependency. (#20619)Rémi Lacroix1-2/+1
Additionaly remove the version constraint as newer versions work with OpenMPI 4.X.Y and the new experimental concretizer is now available for testing.
2021-01-06py-scipy: add v1.6.0 (#20637)Adam J. Stewart1-0/+3
2021-01-06GDAL: add v3.2.1 (#20664)Adam J. Stewart1-0/+5
2021-01-06GenFit: added new package (#20653)Tao Lin1-0/+20
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-01-06lbann: make catch2 a "build" and "test" dependency (#20666)Brian Van Essen1-1/+1
2021-01-06dealii: fix concretization problem between trilinos and adol-c (#20606)Luca Heltai1-0/+2
2021-01-06py-sphinx-rtd-theme: remove npm dependency (#20675)Adam J. Stewart1-7/+10
2021-01-06py-numpy: add v1.19.5 (#20684)Adam J. Stewart1-0/+1
2021-01-06qa: use dependabot to update Github ActionsMassimiliano Culpo1-0/+7
2021-01-06fakexrandr: add new package (#20687)Adam J. Stewart1-0/+46
2021-01-06Xorg proto: type build -> link (#20685)Adam J. Stewart118-200/+197
2021-01-06py-picrust2: added new package (#20455)Desmond Orton2-9/+38
2021-01-06update stat and deps with bug fixes (#20690)Gregory Lee6-4/+19
2021-01-06libspatialite: added v5.0.0 (#20293)Sinan1-1/+3
Co-authored-by: sbulut <sbulut@3vgeomatics.com>
2021-01-05Rocm-openmp-extras 4.0 version updates (#20692)estewart081-11/+27
2021-01-05bump up version for rocm-4.0.0 release (#20691)Sreenivasa Murthy Kolam3-8/+12
2021-01-05alps: fix for latest gcc and test bug (#20462)ketsubouchi4-2/+89
* gcc build OK * gcc mc-01 OK * time test problem * remove comment and debug * use climit * TAB to spaces * comment
2021-01-05concretizer: make rules on virtual packages more linearMassimiliano Culpo1-11/+9
fixes #20679 In this refactor we have a single cardinality rule on the provider, which triggers a rule transforming a dependency on a virtual package into a dependency on the provider of the virtual.
2021-01-05spack python: allow use of IPython (#20329)Vanessasaurus3-13/+77
This adds a -i option to "spack python" which allows use of the IPython interpreter; it can be used with "spack python -i ipython". This assumes it is available in the Python instance used to run Spack (i.e. that you can "import IPython").
2021-01-05VTK: add -no-ipo for builds using intel compiler (#20480)andymwood1-4/+15
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-01-05bugfix for target adjustments on target ranges (#20537)Greg Becker3-15/+20
2021-01-05Mesa: use auto when llvm is built shared (#20683)Ethan Stam1-0/+2
2021-01-05Updates and Enhancements to AOMP Recipe. Added version 3.10.0. (#20464)estewart081-288/+182
* Update recipe for AOMP. Reduced repitition with version hashes. Expanded dependency versioning. Reduced repitition with cmake args. Added version 3.10.0 * Update dependency versions and remove uneeded quotes. * Update var/spack/repos/builtin/packages/aomp/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-01-05AMD ROCm 3.10 Release: Add new package recipe for rocm-openmp-extras. (#20204)estewart081-0/+341
* AMD ROCm 3.9 Release: Add new package recipe for openmp-extras. * Updated openmp-extras recipe. Changed name to rocm-openmp-extras. Reduced repitition with component hashes. Adjusted the removal of CMAKE_BUILD_TYPE. Reduced repitition in cmake args. Added 3.10.0 to recipe. * Update python/py-setuptools dependency versions. * Expand dependency versions, fix the openmp cmake args. * Remove double formats. * Substitute escape characters with string=True for filter_file(s). * Remove CMAKE_VERBOSE_MAKEFILE, already present in standard args.
2021-01-05Berkeley-DB: Fix compilation with NVIDIA HPC Compilers on Red Hat 8. (#20616)Rémi Lacroix1-3/+6
2021-01-05Fix compilation for boost@1.72: (#20618)Luca Heltai1-0/+6
2021-01-05ParaView: Allow choosing a CUDA architecture. (#20623)Rémi Lacroix1-0/+7
This is useful when the "native" architecture cannot be guessed.
2021-01-05Add cray-fftw (#20654)Harmen Stoppels1-0/+34
2021-01-05compiler version format changed (#20671)Robert Cohn1-2/+2
2021-01-05Update of Eccodes to 2.19.1 (#20368)MBlaschek1-0/+3
* Update of Eccodes to 2.19.1 * PEP8 * PEP8 * PEP8-whitespace * Update var/spack/repos/builtin/packages/eccodes/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Michael Blaschek <michael.blaschek@univie.ac.at> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-01-05AOCC support for WRFv3.9.1.1 (#20568)AMD Toolchain Support5-1/+236
* AOCC support for WRFv3.9.1.1 * r' as prefix for string literal
2021-01-05concretizer: use consistent naming for compiler predicates (#20677)Todd Gamblin2-10/+8
Every other predicate in the concretizer uses a `_set` suffix to implement user- or package-supplied settings, but compiler settings use a `_hard` suffix for this. There's no difference in how they're used, so make the names the same. - [x] change `node_compiler_hard` to `node_compiler_set` - [x] change `node_compiler_version_hard` to `node_compiler_version_set`
2021-01-04OpenMPI: Depends on hwlock & libevent (#20658)Axel Huebl1-0/+5
* OpenMPI: Depends on hwlock & libevent Both hwlock & libevent are required dependencies of Open MPI. While they are also shipped internally, newer releases (>=4.0) will start looking for external packages by default. This caused build issues of Open MPI 4.0.5 with Fortran on macOS 10.15. * Open MPI 4.0: libevent external Internally shipped libevent just works fine for prior releases.
2021-01-04SS2NEON transition to new repository; update headers and patch (#20647)Jim Huang8-2804/+16
2021-01-04amrex: new version 21.01 (#20659)mic841-0/+1
2021-01-04py-hatchet: added latest versions up to 1.3.0 (#20667)Stephanie Brink1-1/+5
2021-01-04Bugfix: Support old installations using Cray MPICH (#20663)Peter Scheibel1-9/+31
#20076 moved Cray-specific MPICH support from the Spack MPICH package to a new cray-mpich Package. This broke existing package installs using external mpich on Cray systems. This PR keeps the cray-mpich package but restores the Cray-specific MPICH support for older installations. In the future this support should be removed from the Spack mpich package and users should be directed to use cray-mpich on Cray.
2021-01-05bump up rocm math libs recipes for rocm-4.0.0 release (#20651)Sreenivasa Murthy Kolam15-32/+53
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