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2022-11-17docs: fix typo in multiple build systems (#33965)Harmen Stoppels1-1/+1
2022-11-17relocate.py: small refactor for file_is_relocatable (#33967)Harmen Stoppels4-39/+31
2022-11-17Remove deprecated subcommands from "spack bootstrap" (#33964)Massimiliano Culpo3-61/+24
These commands are slated for removal in v0.20
2022-11-17Octopus : Separate serial and MPI dependencies (#33836)Ashwin Kumar1-7/+30
* replace mpi as a variant instead of dependency * separate serial and MPI dependencies * configure args depending on serial or mpi variant * reformat with black
2022-11-17py-torchmetrics: add v0.10.3 (#33962)Adam J. Stewart1-0/+1
2022-11-17Add sgid notice when running on AFS (#30247)Michael Kuhn1-0/+7
2022-11-17Python: fix bug detection, trying to access self (#33955)Massimiliano Culpo1-1/+1
Typo introduced in #33847
2022-11-16zlib, openssl: return to `http` URLs (#33324)Ben Boeckel2-2/+2
In #3113, `https` was removed to ensure that `curl` can be bootstrapped without SSL being present. This was lost in #25672 which aimed to use `https` where possible. Co-authored-by: Bernhard Kaindl <43588962+bernhardkaindl@users.noreply.github.com>
2022-11-16[xz] icc does not support attribute __symver__ (#33839)Stephen Sachs1-0/+4
xz have added attribute __symver__ for compilers that identify as GCC>=10.0 via __GNUC__. Intels `icc` sets __GNUC__ but currently does not support this attribute: https://community.intel.com/t5/Intel-C-Compiler/symver-not-supported/m-p/1429028/emcs_t/S2h8ZW1haWx8dG9waWNfc3Vic2NyaXB0aW9ufExBQVRWMjIyUFFZTlZTfDE0MjkwMjh8U1VCU0NSSVBUSU9OU3xoSw#M40459
2022-11-16serialbox: update patch to handle UTF-8 conversion errors (#33317)Sergey Kosukhin2-7/+32
2022-11-16py-jupyter-server: add 1.21.0 (#33310)Manuela Kuhn1-2/+7
2022-11-17lib/spack/spack/store.py: Fix #28170 for padding relocation (#33122)Brian Vanderwende1-0/+1
2022-11-16py-jupyterlab: add 3.4.8 (#33308)Manuela Kuhn1-5/+9
2022-11-17blast-plus: update to 2.13.0 and add cpio as build dependency (#33187)Christian Kniep1-1/+4
2022-11-17* ninja: Set min. required version of re2c dependency, fixes #33127 (#33128)Sebastian Grabowski1-0/+1
Reviewed-by: haampie, bernhardkaindl
2022-11-17gettext: On ppc64le, for older versions, use system cdefs.h (#33411)Jonathon Anderson1-0/+7
Co-authored-by: Bernhard Kaindl <43588962+bernhardkaindl@users.noreply.github.com>
2022-11-16Clean unit-test workflow file (#33945)Massimiliano Culpo1-16/+5
Delete statements related to Python 2.7, and avoid installing patchelf since now we can bootstrap it.
2022-11-16updated v2.11.8 (#33944)chenwany1-2/+4
2022-11-16initial implementation of slingshot detection (#33793)Greg Becker2-2/+7
2022-11-16Upstreams: add canonicalize path (#33946)psakievich1-1/+3
2022-11-16Windows bootstrapping: remove unneeded call to add dll to PATH (#33622)John W. Parent1-7/+0
#32942 fixed bootstrapping on Windows by having the core Spack code explicitly add the Clingo package bin/ directory as a DLL path. Since then, #33400 has been merged, which ensures that the Python module installed by the Spack `clingo` package can find the DLLs in bin/. Note that this only works for Spack instances which have been bootstrapped after #33400: for installations bootstrapped before then, you will need to run `spack clean -b` (this would only be needed for Spack instances running on Windows).
2022-11-16SIP build system: fix "python not defined in builder" (#33906)Stephen Sachs1-1/+1
Co-authored-by: Stephen Sachs <stesachs@amazon.com>
2022-11-16qt: new version 5.15.6 and 5.15.7 (#33933)Wouter Deconinck1-0/+2
2022-11-16add sz3 and mdz smoke test for inclusion in e4s (#33864)Robert Underwood1-0/+14
* add sz3 and mdz smoke test Co-authored-by: Robert Underwood <runderwood@anl.gov>
2022-11-16py-isal: use external libisal (#33932)snehring1-0/+4
* py-isal: adding some missing build deps * py-isal: use external libisal
2022-11-16New Package: rarpd (#28686)Pat Riehecky1-0/+26
2022-11-16docs updates for spack env depfile (#33937)Harmen Stoppels1-6/+10
2022-11-16neovim: fix build dependencies (#33935)Matthias Wolf1-2/+2
Buildin neovim@0.8.0 complains (for me) about Lua's lpeg and mpack packages not being available at build time. Removing the link-only setting in the dependencies for these two packages fixes the build for me.
2022-11-16spack env depfile in Gitlab CI should use `install-deps/pkg-version-hash` ↵Harmen Stoppels1-3/+1
target (#33936)
2022-11-16Change code suggestions to output black formatter compliant code (#33931)Kevin Broch1-2/+2
2022-11-16starpu: add v1.3.10 (#33934)Nathalie Furmento1-1/+2
2022-11-16Automated deployment to update package flux-core 2022-11-09 (#33780)Vanessasaurus1-0/+1
Co-authored-by: github-actions <github-actions@users.noreply.github.com>
2022-11-16Getting Started: Python 2 is no longer supported (#33927)Adam J. Stewart1-1/+1
2022-11-15docs: fix typo (#33926)Michael Kuhn1-2/+2
2022-11-15zfp: update for version 1.0.0 (#33452)Garrett Morrison2-32/+71
* zfp: updates and many fixes for version 1.0.0 Co-authored-by: Bernhard Kaindl <43588962+bernhardkaindl@users.noreply.github.com>
2022-11-15xsdk: add version @0.8.0 (#33794)Satish Balay1-9/+92
- enable sundials+magma+ginkgo - enable dealii+sundials - disable dealii~cgal due to build errors - enable petsc+rocm - enable slepc+cuda+rocm - enable strumpack+cuda+slate - enable slate build with non-gcc compilers - enable pumi+shared - enable mfem+shared - enable ginkgo+mpi - add hiop - and exago - use exago~ipopt due to mumps~mpi conflict with mpi.h) - add raja variant [used by exago/hiop] ~raja builds exago in pflow-only mode - i.e exago~hiop~ipopt~python~cuda ^hiop~cuda [Default on MacOS] Co-authored-by: Cody Balos <balos1@llnl.gov>
2022-11-15Update BML versions list in package.py (#33920)Jean-Luc Fattebert1-10/+18
* Update BML versions list in package.py * Update package.py
2022-11-15Run Python 3.6 unit tests on ubuntu-20.04 (#33918)Massimiliano Culpo1-2/+12
2022-11-15spectre: add v2022.11.15 (#33921)SXS Bot1-0/+3
Co-authored-by: sxs-bot <sxs-bot@users.noreply.github.com>
2022-11-15Show time per phase (#33874)Harmen Stoppels2-16/+11
2022-11-15meson: add new version 0.64.0 (#33880)Erik Schnetter2-2/+16
2022-11-15New Package: Prime95/Mprime (#33895)Saqib Khan1-0/+35
* New Package: Prime95/Mprime * Fix trailing whitespaces in prime95 * Fix checksum for prime95 Signed-off-by: saqibkh <saqibkhan@utexas.edu>
2022-11-15Add v0.8 to Arbor (#33916)Brent Huisman1-5/+14
2022-11-15nsimd: Update Python requirements (#33879)Erik Schnetter1-1/+5
We need Python 3.0:3.9
2022-11-15thepeg: make rivet dependency optional... (#33912)iarspider1-3/+17
* thepeg: make rivet dependency optional... * add "libs" variant, move compiler flags to flag_handler Co-authored-by: iarspider <iarspider@users.noreply.github.com>
2022-11-15depfile: improve tab completion (#33773)Harmen Stoppels2-20/+47
This PR allows you to do: ``` spack env create -d . spack -e . add python spack -e . concretize spack -e . env depfile -o Makefile make in<tab> # -> install make install-<tab> # -> install-deps/ make install-deps/py<tab> # -> install-deps/python-x.y.z-hash make install/zl<tab> # -> install/zlib-x.y.z-hash make SP<tab> # -> make SPACK make SPACK_<tab> # -> make SPACK_INSTALL_FLAGS= ```
2022-11-15Fixup: start the timer before the phase (#33917)Harmen Stoppels1-2/+1
2022-11-15Fix incorrect timer (#33900)Harmen Stoppels6-70/+305
Revamp the timer so we always have a designated begin and end. Fix a bug where the phase timer was stopped before the phase started, resulting in incorrect timing reports in timers.json.
2022-11-15glib: add missing libelf dep (#33894)Harmen Stoppels1-1/+3
2022-11-15openssh: add libxcrypt (#33892)Harmen Stoppels1-0/+1