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2021-12-06r-rcpparmadillo: add 0.10.7.3.0 (#27712)Manuela Kuhn1-2/+2
2021-12-06[py-pyspellchecker] New package (#27788)Jen Herting1-0/+18
Co-authored-by: Sid Pendelberry <sid@rit.edu>
2021-12-06apktool: new package (#27782)Jen Herting1-0/+42
2021-12-06mumps: fix problem when using Intel OneAPI mkl static lib (#27725)Hector Barrios1-1/+1
2021-12-06r-prettydoc: fix dependency (#27791)Glenn Johnson1-1/+1
The markdown dependency is `r-rmarkdown` rather than `r-markdown`.
2021-12-06r-affy: set r version constraint (#27792)Glenn Johnson1-1/+1
2021-12-06Remove the autotools resources (#27793)Glenn Johnson1-8/+0
This essentially reverts #18917 as it seems to no longer be necessary due to recent autotools changes in core spack.
2021-12-06opencascade: add v7.6.0 (#27799)Wouter Deconinck1-0/+2
2021-12-06suite-sparse: Add CXSparse and SPQR to targets (#27804)Glenn Johnson1-1/+3
2021-12-06glib: add 2.70.2 (#27812)Michael Kuhn1-0/+1
2021-12-06Set preferred version of vtk to 9.0.3 (#27817)Glenn Johnson1-1/+1
There is a library symbol issue with libioss and python with version 9.1.0 so set preferred version to 9.0.3.
2021-12-06acts: use variants['cuda_arch'] only when +cuda (#27813)Wouter Deconinck1-3/+4
Since #27185, the cuda_arch variant values are conditional on +cuda. This means that for -cuda specs, the installation fails with: ``` ==> acts: Executing phase: 'cmake' ==> Error: KeyError: 'cuda_arch' /home/wdconinc/git/spack/var/spack/repos/builtin/packages/acts/package.py:222, in cmake_args: 219 log_failure_threshold = spec.variants['log_failure_threshold'].value 220 args.append("-DACTS_LOG_FAILURE_THRESHOLD={0}".format(log_failure_threshold)) 221 >> 222 cuda_arch = spec.variants['cuda_arch'].value 223 if cuda_arch != 'none': 224 args.append('-DCUDA_FLAGS=-arch=sm_{0}'.format(cuda_arch[0])) 225 ```
2021-12-06bohrium: missing dependencies (#27807)Glenn Johnson1-9/+13
2021-12-06librsvg,libcroco: add doc variant to avoid unsolvable constraints due to ↵Wouter Deconinck2-3/+16
gtkplus (#27790) * [libcroco] add variant doc, depends_on gtk-doc when +doc * [librsvg] add variant doc, depends_on gtk-doc when +doc
2021-12-06rivet: hepmc=3: Fix prefix of --with-hepmc3 (#27814)Wouter Deconinck1-1/+1
2021-12-05new package: py-tensorflow-datasets (#27746)Glenn Johnson2-0/+73
* new package: py-tensorflow-datasets - includes new dependency package: py-tensorflow-metadata * Update var/spack/repos/builtin/packages/py-tensorflow-datasets/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-tensorflow-metadata/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-12-05py-astropy: set version constraint on cfitsio (#27805)Glenn Johnson1-1/+1
2021-12-05cgdb: add depends_on('gdb', type='run') (#27753)Ben Bergen1-1/+3
* Added gdb Dependency When using spack to install cgdb, a spack-built gdb is necessary to avoid dynamic link errors. - Added maintainer: tuxfan - Set preferred to 'master' (best version for spack currently) * Update: The gdb dependency added by this PR is for runtime Co-authored-by: Bernhard Kaindl <43588962+bernhardkaindl@users.noreply.github.com>
2021-12-05r-v8: add 3.6.0 (#27714)Manuela Kuhn1-5/+7
* r-v8: add 3.6.0 * Add conflict and deprecate version 3.4.0
2021-12-03py-imagesize: add 1.3.0 (#27787)Manuela Kuhn1-1/+3
2021-12-03py-jeepney: add 0.7.1 (#27786)Manuela Kuhn1-0/+1
2021-12-03julia: update versions and add znver3 to Julia's CPU target (#27770)Chung ShinYee1-2/+9
* julia: new versions. * julia: Support AMD Milan CPU znver3.
2021-12-03LLVM: Revert build_llvm_dylib to llvm_dylib (#27761)kwryankrattiger3-6/+6
2021-12-03berkeley-db: Add minimal external detection (#27752)Tamara Dahlgren1-0/+15
2021-12-03r-tictoc: add 1.0.1 (#27715)Manuela Kuhn1-5/+6
2021-12-03ExaGO: add new versions (#27768)Asher Mancinelli1-3/+11
2021-12-03hpctoolkit: add support for smoke tests (#27783)Mark W. Krentel1-0/+37
This adds support in spack for both build/install tests (spack install --run-tests) and post-install smoke tests (spack test run). Hpctoolkit itself only recently added tests, so for now, this only applies to branch master.
2021-12-03[libzmq] added version 4.3.4 (#27780)Jen Herting1-0/+1
2021-12-03New package: mujoco (#27656)Simo Tuomisto1-0/+49
2021-12-03amrex: add new release 21.12 (#27781)Weiqun Zhang1-1/+2
2021-12-03LIBXSMM 1.17 (#27775)Hans Pabst1-1/+2
2021-12-03Fixed typo (NAMD). (#27774)Hans Pabst1-1/+1
2021-12-03singularity, singularityce: Add 3.8.5 and ce-3.9.1 (#27778)Bernhard Kaindl2-3/+7
2021-12-03Parallel-netcdf: Update Spack test dir (#27232)Richarda Butler1-5/+10
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2021-12-03CUDA: add v11.5.1 (#27689)Filippo Spiga1-0/+4
2021-12-02ParaView: add dependencies needed in paraview@master (#27745)Ethan Stam1-1/+9
* The proj and nlohmann-json packages are needed in paraview@master * ParaView: bump master subdir version to 5.10
2021-12-02Ginkgo package: add oneAPI support (#26868)Terry Cojean2-2/+100
To use this, you can "spack install intel-oneapi-compilers" and then "spack compiler add" the new compiler. You would need to install with "spack install ginkgo+oneapi%dpcpp"
2021-12-03nss: add 3.73 (#27767)Michael Kuhn1-1/+8
2021-12-02Support packages which need to explicitly refer to dpcpp by name (#27168)Peter Scheibel3-1/+31
* Hack to support packages which need to explicitly refer to dpcpp by name * cc script needs to know about dpcpp
2021-12-03nspr: add 4.32 (#27766)Michael Kuhn1-0/+1
2021-12-02libseccomp package: add version 2.5.3 (#27756)Bernhard Kaindl1-6/+4
- Use .tar.gz archive - Update 2.3.3 to use .tar.gz archive (and update checksum) - autoreconf dependency is no-longer required - The new version depends on gperf
2021-12-02lvm2 package: add version 2.03.14 (#27760)Bernhard Kaindl1-1/+2
2021-12-02New package: f3d (add version 1.1.1) (#27755)Ben Darwin1-0/+17
2021-12-02New package: py-fire (#27731)Jen Herting1-0/+25
* dependency for stylegan2 * fixed copyright * [py-fire] - fixed some formatting - url -> pypi * [py-fire] removed extra https:// * [py-fire] - removed python version restriction - enum34 -> py-enum34 * [py-fire] removed .999 Co-authored-by: Sid Pendelberry <sid@rit.edu>
2021-12-02New package: py-vector-quantize-pytorch (#27759)Jen Herting1-0/+22
* [py-vector-quantize-pytorch] New package * [py-vector-quantize-pytorch] flake8 * [py-vector-quantize-pytorch] removed unnecessary dependency Co-authored-by: Sid Pendelberry <sid@rit.edu>
2021-12-01QMCPACK: fix use of MPI wrappers (#27744)Ye Luo1-10/+8
2021-12-01elpa package: add version 2021.05.002_bugfix (#27748)Tiziano Müller2-2/+11
* elpa: filter _bugfix in version for include dir * libxc: add version 5.1.7
2021-12-01New package: goshimmer (#27339)Bernhard Kaindl1-0/+40
2021-12-01Add: openPMD-viewer (#27516)Axel Huebl1-0/+56
* Add: openPMD-viewer Add the `py-openpmd-viewer` package. * openPMD-viewer: Improve Variant Control * openPMD-viewer: Update to Source from Pip/PyPA https://spack.readthedocs.io/en/latest/build_systems/pythonpackage.html#pypi-vs-github * Fix style: comment * openPMD-viewer: fix requirements add reviewer feedback
2021-12-01cp2k: fix build issues without cuda, and with elpa on openSUSE (#27738)Tiziano Müller1-3/+3
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