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2022-02-01gettext: find external (#28610)Nils Leif Fischer1-0/+11
2022-02-01Add version v0.6 to Arbor package. (#28628)Brent Huisman1-3/+7
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2022-02-01Eccodes: update urls and add new versions (#28614)Sergey Kosukhin1-2/+5
2022-02-01gcc: allow building 11.2.0 on macOS (#28662)Massimiliano Culpo1-0/+5
2022-02-01ascent: add patch for gcc 10 + 11 (#28592)Cyrus Harrison2-0/+28
2022-02-01Update package versions: RADICAL-Cybertools (RE, RP, RS, RU) (#28523)Mikhail Titov4-6/+14
* rct: update packages (RE, RP, RS, RU) with new versions * rct: minor version release for RP * rct: fixed versions for dependencies (RS and RU)
2022-02-01saga-gis: tweak dependencies and deprecate some versions (#28677)Glenn Johnson1-9/+16
- deprecate versions 2 and 3 - set needed opencv variants - adjust proj constraint - patch header path for opencv
2022-02-01libdc1394: update dependencies and add libraw1394 dependency (#28675)Glenn Johnson2-0/+21
2022-02-01py-black: add v22.1.0 (#28680)Adam J. Stewart2-21/+26
2022-02-01 jsonnet: add new package (#28645)Pat Riehecky1-0/+39
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-02-01pika: add v0.1.0 (#28684)Mikael Simberg1-0/+1
Co-authored-by: Mikael Simberg <mikael.simberg@iki.if>
2022-02-01alpaka: add v0.8.0 (#28689)Valentin Volkl2-1/+2
2022-02-01vtk-m: add v1.7.1 release (#28690)Vicente Bolea1-1/+2
2022-02-01charmpp: default backend to 'multicore' on macOS (#28443)Nils Leif Fischer1-1/+7
2022-02-01llvm: add llvm_config helper (#28670)Tom Scogland1-0/+9
Add a helper as a base to build better libs etc. methods
2022-02-01xyce: add 'plugin' variant (#28698)Paul Kuberry1-1/+7
2022-02-01maven: add v3.8.4 (#28699)Ryan Marcellino1-0/+1
2022-02-01samrai: add "--enable-shared" option as "+shared" (#28695)Dylan Jude1-0/+5
2022-02-01py-torch: fix python_platlib reference (#28565)Adam J. Stewart1-2/+8
2022-02-01pygmo: fix build (#28702)Adam J. Stewart1-9/+15
2022-01-31opencv: add new version, variant, and patch (#27374)Glenn Johnson24-695/+1134
* opencv: add new version, variant, and patch - added version 4.5.4 - added tesseract variant - added patch to not add system paths * Add leptonica depends and contrib conflicts * Add dependencies for 1394 support - new package: libraw1394 - add sdl dependency to libdc1394 - add conflict for openjpeg and jasper * Adjust dependencies and conflicts for opencv modules * rewrite of opencv - all prebuilt apps are now variants and can be installed - core is no longer a variant. It was always built anyway so it was not really a variant. - contrib is no longer a variant. All of the contrib modules are now available as variants. - components that can not be built with Spack are no longer variants. They are set to 'off' to prevent pulling from system. - handle the case where a module and a component have the same name - use `with when` framework - adjust dependencies and conflicts - new package: libraw1394 - have libdc1394 depend on libraw1394 - patch to find clp - patch to find onnx - patch for cvv to find Qt - format with black * Incorporate recommended changes - fix variants and dependencies on packages that depend on opencv - remove opencv-3.2 and patches - add some new patches to handle different versions - cntk needs further work - the openvslam package was markde deprecated as it is no longer an active project and the repository has no code * Remove gmake dependency. * Remove sdl support SDL is only used in an example case, but the examples are not built. * remove openvslam * Remove opencv+flann variant from 3dtk * Back out cfitsio constraint from py-astropy * remove opencv+flann variant from dlib * remove boost constraint from 3dtk * Remove non-opencv related bohrium changes * Adjustments for cntk - protobuf constraint at version 3.10 - need specific variants for opencv - improve patch * Deprecate CNTK package * variant tweaks - added appropriate conflicts for cublas - made cuda/cudev relationship explicit - moved openx to pending components as it needs an openvx package * fix isort style error * Use date version from kaldi rather than commit * Revert changes from a bad rebase * Add +flann to 3dtk and dlib * Use compression support with libtiff * remove `+datasets` from opencv dependency The py-torchgeo package does not need opencv+datasets. * fix typo zip --> zlib
2022-01-31e4s ci: add spec: gptune (#28604)eugeneswalker2-0/+2
2022-01-31mesa18: depends on python@3.8.99 max (#28345)eugeneswalker1-1/+1
2022-01-31Update Packages: py-asgiref, py-h11, py-websockets (#28649)Pat Riehecky3-2/+13
2022-01-31Add checksum for py-cryptography 3.2.1 (#28685)iarspider1-0/+1
2022-01-31changing site_packages_dir to python_platlib for gptune (#28669)liuyangzhuan2-4/+5
* added package gptune with all its dependencies: adding py-autotune, pygmo, py-pyaml, py-autotune, py-gpy, py-lhsmdu, py-hpbandster, pagmo2, py-opentuner; modifying superlu-dist, py-scikit-optimize * adding gptune package * minor fix for macos spack test * update patch for py-scikit-optimize; update test files for gptune * fixing gptune package style error * fixing unit tests * a few changes reviewed in the PR * improved gptune package.py with a few newly added/improved dependencies * fixed a few style errors * minor fix on package name py-pyro4 * fixing more style errors * Update var/spack/repos/builtin/packages/py-scikit-optimize/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * resolved a few issues in the PR * fixing file permissions * a few minor changes * style correction * minor correction to jq package file * Update var/spack/repos/builtin/packages/py-pyro4/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * fixing a few issues in the PR * adding py-selectors34 required by py-pyro4 * improved the superlu-dist package * improved the superlu-dist package * moree changes to gptune and py-selectors34 based on the PR * Update var/spack/repos/builtin/packages/py-selectors34/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * improved gptune package: 1. addressing comments of tldahlgren in PR 26936; 2. adding variant openmpi * fixing style issue of gptune * changing file mode * improved gptune package: add variant mpispawn which depends on openmpi; add variant superlu and hypre for installing the drivers; modified hypre package file to add a gptune variant * fixing style error * corrected pddrive_spawn path in gptune test; enforcing gcc>7 * fixing style error * setting environment variables when loading gptune * removing debug print in hypre/package.py * adding superlu-dist v7.2.0; fixing an issue with CMAKE_INSTALL_LIBDIR * changing site_packages_dir to python_platlib * not using python3.9 for py-gpy, which causes due to dropped support of tp_print * more replacement of site_packages_dir Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-01-31Fix SECURITY.md file by adding v0.17.x to supported versions (#28661)Massimiliano Culpo1-0/+1
2022-01-31julia: add targets constraint to llvm (#28682)Harmen Stoppels1-1/+1
2022-01-31trilinos: Fix cxxstd effects for Trilinos versions <13 (#28663)Paul Kuberry1-6/+13
2022-01-29py-horovod: add py-tensorflow-estimator dependency (#28674)Adam J. Stewart1-0/+1
2022-01-29New package: py-kaldiio (#28643)Jen Herting1-0/+19
* espnet first build with depends * fixed flake8 * updated to lastest version and removed python dependency * changed to pypi and version 2.17.2 * [py-kaldiio] depends on py-pytest-runner * [py-kaldiio] updated copyright Co-authored-by: Sid Pendelberry <sid@rit.edu>
2022-01-29prmon: better testing, fix checksums (#28672)Valentin Volkl1-2/+15
* prmon: make sure integration tests do not run in parallel Some integration tests fail if not run on an otherwise idle machine. * prmon: run unittests based on googletest * prmon: fix checksums
2022-01-29superlu: simplify cmake logic and fix cuda conflict (#28658)Seth R. Johnson1-46/+48
* superlu-dist: use CMakePackage helper functions * Fix #28609 It's OK to have CUDA in the dependency tree as long as it's not being used for superlu-cuda.
2022-01-28Update Packages: py-celery py-kombu py-amqp py-pytz py-click-plugins (#28648)Pat Riehecky6-8/+39
2022-01-28New Package: py-python-dotenv (#28651)Pat Riehecky1-0/+24
2022-01-28Update Package: py-pre-commit (#28665)Pat Riehecky1-3/+7
2022-01-28macholib, altgraph: update vendored dependency (#28664)Massimiliano Culpo25-1253/+1345
2022-01-28Update actions/setup-python to latest version (#28634)Massimiliano Culpo4-26/+14
2022-01-28prmon: add up to v3.0.1, add new maintainers (#28657)Graeme A Stewart1-3/+7
* Update prmon package to latest versions Add recent versions of the prmon package Add the spdlog dependency for versions >=3 Add package developers as additional maintainers Update name of development branch to 'main' * Correct checksum for v3.0.1
2022-01-28librsb: added v1.2.0.11/v1.3.0.0 (#28637)Michele Martone1-1/+4
2022-01-28fpchecker: add v0.3.5 (#28639)Tim Haines1-0/+1
Co-authored-by: Tim Haines <thaines@cs.wisc.edu>
2022-01-28spectre: allow disabling debug symbols (#28511)Nils Leif Fischer1-7/+30
* spectre: allow disabling debug symbols * spectre: fix PCH builds * spectre: support builds with shared libs
2022-01-28metabat: switch to CMakePackage, deprecate old versions (#28384)Desmond Orton1-3/+5
2022-01-28ParaView: Require Ninja for builds (#28650)kwryankrattiger1-0/+3
2022-01-28slepc: switch from using -with-arpack-dir to --with-arpack-include/lib ↵Satish Balay1-11/+18
options (#28654) Also save configure.log, make.log
2022-01-28py-torch: add v1.10.2 (#28653)Adam J. Stewart2-0/+3
2022-01-28Add more ReFrame versions (#28655)Vasileios Karakasis1-0/+2
2022-01-28at-spi2-core: patch for version 2.40.1 and beyond (#28497)Desmond Orton1-0/+4
at-spi2-core is automatically selecting dbus-broker and enabling systemd if it finds dbus-broker-launch which some systems might have even without systemd being part of the actual spack environment. This is not ideal for a spack package.
2022-01-28ucx backtrace-detail variant (#28625)Tom Vander Aa1-0/+4
ucx has the configure option --[enable|disable]-backtrace detail. This option is not explicitely set by spack, causing problems on my system, because ./configure does not find the bfd.h header file / libbfd.so library. Added variant + dependencies (binutils). Disabled by default
2022-01-28gptune: add variants (mpispawn, hypre) (#27733)liuyangzhuan5-86/+626
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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