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`spec_clauses()` attempts to look up package information for concrete specs in order to
determine which virtuals they may provide. This fails for renamed/deleted dependencies
of buildcaches and installed packages.
This will eventually be fixed by #35258, which adds virtual information on edges, but we
need a workaround to make older buildcaches usable.
- [x] make an exception for renamed packages and omit their virtual constraints
- [x] add a note that this will be solved by adding virtuals to edges
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The concretizer can fail with `reuse:true` if a buildcache or installation contains a
package with a dependency that has been renamed or deleted in the main repo (e.g.,
`netcdf` was refactored to `netcdf-c`, `netcdf-fortran`, etc., but there are still
binary packages with dependencies called `netcdf`).
We should still be able to install things for which we are missing `package.py` files.
`Spec.inject_patches_variant()` was failing this requirement by attempting to look up
the package class for concrete specs. This isn't needed -- we can skip it.
- [x] swap two conditions in `Spec.inject_patches_variant()`
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I will follow this up with a variant to flux-core to add flux-security, and then automation in the flux-framework/spack repository.
Signed-off-by: vsoch <vsoch@users.noreply.github.com>
Co-authored-by: vsoch <vsoch@users.noreply.github.com>
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Co-authored-by: Bernhard Kaindl <43588962+bernhardkaindl@users.noreply.github.com>
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* [jwt-cpp] New package
* Update homepage
Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
* [@spackbot] updating style on behalf of greenc-FNAL
---------
Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
Co-authored-by: greenc-FNAL <greenc-FNAL@users.noreply.github.com>
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The @= in `spack find` output adds a bit of noise. Remove it as we
did for `spack spec` and `spack concretize`.
This modifies display_specs so it actually covers other places we use that routine, as
well, e.g., `spack buildcache list`.
before:
```
-- linux-ubuntu20.04-aarch64 / gcc@=11.1.0 -----------------------
ofdlcpi libpressio@0.88.0
```
after:
```
-- linux-ubuntu20.04-aarch64 / gcc@11.1.0 -----------------------
ofdlcpi libpressio@0.88.0
```
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If a user does not explicitly `--force` the concretization of an entire environment,
Spack will try to reuse the concrete specs that are already in the lockfile.
---------
Co-authored-by: becker33 <becker33@users.noreply.github.com>
Co-authored-by: Todd Gamblin <tgamblin@llnl.gov>
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* freecad: new package w/ dependencies/updates
* review
* symbols/debug variants only when autotools
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Co-authored-by: Alec Scott <hi@alecbcs.com>
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@= is accurate, but noisy. Other UI commands tend not to
print the redundant `@=` for known concrete versions;
make `spack spec` consistent with them.
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* Add HDF5 version 1.14.1
* Update to version HDF5 1.14.1-2.
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* gitlab ci: release fixes and improvements
- use rules to reduce boilerplate in .gitlab-ci.yml
- support copy-only pipeline jobs
- make pipelines for release branches rebuild everything
- make pipelines for protected tags copy-only
* gitlab ci: remove url changes used in testing
* gitlab ci: tag mirrors need public key
Make sure that mirrors associated with release branches and tags
contain the public key needed to verify the signed binaries. This
also ensures that when stack-specific mirror contents are copied
to the root, the root mirror has the public key as well.
* review: be more specific about tags, curl flags
* Make the check in ci.yaml consistent with the .gitlab-ci.yml
---------
Co-authored-by: Ryan Krattiger <ryan.krattiger@kitware.com>
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* py-asdf: add 2.15.0 and dependencies
* py-asdf: PR review
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* add 3.0b release
* adding mvapich2 version 2.3.7-1
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Co-authored-by: Matt Lieber <lieber.31@osu.edu>
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Currently, specs on buildcache mirrors must be referenced by their full description. This PR allows buildcache specs to be referenced by their hashes, rather than their full description.
### How it works
Hash resolution has been moved from `SpecParser` into `Spec`, and now includes the ability to execute a `BinaryCacheQuery` after checking the local store, but before concluding that the hash doesn't exist.
### Side-effects of Proposed Changes
Failures will take longer when nonexistent hashes are parsed, as mirrors will now be scanned.
### Other Changes
- `BinaryCacheIndex.update` has been modified to fail appropriately only when mirrors have been configured.
- Tests of hash failures have been updated to use `mutable_empty_config` so they don't needlessly search mirrors.
- Documentation has been clarified for `BinaryCacheQuery`, and more documentation has been added to the hash resolution functions added to `Spec`.
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* Add FNAL Spack team to maintainers.
* New version 6.28/04.
* Support C++20 with ROOT >= 6.28.04.
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* Added STREAM builds customization
* Changed stream_type to enum
* fix code style issues
Signed-off-by: Andrey Parfenov <andrey.parfenov@intel.com>
* rm not necessary optimization
Signed-off-by: Andrey Parfenov <andrey.parfenov@intel.com>
---------
Signed-off-by: Andrey Parfenov <andrey.parfenov@intel.com>
Co-authored-by: iermolae <igor.ermolaev@intel.com>
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* intel-oneapi-mkl: support gnu openmp
* intel-oneapi-mkl: support gnu openmp
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* py-rsatoolbox: add 0.0.5, 0.1.0 and 0.1.2 from wheels
* py-setuptools: add 63.4.3
* remove wheels and open up requirements
* Fix style
* Update var/spack/repos/builtin/packages/py-rsatoolbox/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-rsatoolbox/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Change version for python restriction
---------
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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* py-mne: add 1.4.0 and py-importlib-resources: add 5.12.0
* Fix style
* Update var/spack/repos/builtin/packages/py-mne/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
---------
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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* Update tensorflow variant defaults to match project's defaults
* Apply code style
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This PR ensures that we'll get a comprehensible error message whenever an old
version of Spack tries to use a DB or a lockfile that is "too new".
* Fix error message when using a too new DB
* Add a unit-test to ensure we have a comprehensible error message
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* Coastal codes installation
* Finished debugging swan.
* Fix formatting errors identified by flake8
* Another attempt to fix formatting.
* Fixed year in header.
* Fixed maintainers syntax and other details from review comments.
* Remove redundant url.
---------
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
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* py-pysam: adding version 0.21.0
* Update var/spack/repos/builtin/packages/py-pysam/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
---------
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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Add a section to the lock file to track the Spack version/commit that produced
an environment. This should (eventually) enhance reproducibility, though we
do not currently do anything with the information. It just adds to provenance
at the moment.
Changes include:
- [x] adding the version/commit to `spack.lock`
- [x] refactor `spack.main.get_version()
- [x] fix a couple of environment lock file-related typos
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Co-authored-by: Matt Lieber <lieber.31@osu.edu>
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