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Use canonical SSH urls for git-over-ssh package urls. See also: discussion on #29706, #29749, and https://forum.gitlab.com/t/provided-ssh-url-is-in-the-wrong-format/14320
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* New package: spiner
* Update dependencies for spiner package
* Update var/spack/repos/builtin/packages/spiner/package.py
Co-authored-by: Seth R. Johnson <johnsonsr@ornl.gov>
* Update var/spack/repos/builtin/packages/spiner/package.py
Co-authored-by: Seth R. Johnson <johnsonsr@ornl.gov>
* Remove versions that can't be installed and use ports-of-call@1.1.0
Co-authored-by: Seth R. Johnson <johnsonsr@ornl.gov>
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Since the variant is conditional there's no need to add
conflicts too.
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Version 1.0.0 was uninstallable.
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Co-authored-by: Filippo Spiga <fspiga@nvidia.com>
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* py-torch: fix build with fujitsu-ssl2
* fix to use fujitsu-ssl2 in py-torch v1.5.0 to v1.11.0
* fix to use fujitsu-ssl2 in py-torch v1.2.0 to v1.11.0
* Delete fj-ssl2.patch
* renamed the patches
* Rename fj-ssl2.1.5.patch to fj-ssl2_1.5.patch
* Delete fj-ssl2_1.5.patch
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The Open MPI project has elected to name our development branch - main.
Signed-off-by: Howard Pritchard <howardp@lanl.gov>
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* llvm: add @14.0.0
* llvm@14 provides virtual
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* update rocm recipes for ROCm-5.0.0 release
* revert address sanitizer changes
* fix style errors
* update to the rocm recipes for 5.0.2 release
* fix review comments inside the rocfft recipe
* update the rocfft recipe for sqlite dependency
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We shouldn't be using "remove_linked_tree" to remove the lock file,
since that function expects to receive a directory path as an
argument.
Also, as a further measure to avoid regression, this commit restores
the "ignore_errors=True" argument on linux and adds a unit test
checking that "remove_linked_tree" doesn't change file permissions
as a side effect of a failure to remove.
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* Update package.py
* Update package.py
* Fixes on versions
* Fix style
* Remove code
* Include latest version and removed code
* Remove unecessary cmake dependency
* Apply suggestions
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* Fix py-onnx-runtime recipe
* Add missing dependencies
* Update var/spack/repos/builtin/packages/py-cerberus/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update package.py
* Better fix for py-onnx-runtime
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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* omegah: v10.1.0
this version is from the SCOREC fork of Omega_h
* prefix version with scorec
Co-authored-by: Seth R. Johnson <johnsonsr@ornl.gov>
Co-authored-by: Seth R. Johnson <johnsonsr@ornl.gov>
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Slight simplification of the code: just pass the list of concrete root
specs to the view
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Reduces the number of stat calls to a bare minimum:
- Single pass over src prefixes
- Handle projection clashes in memory
Symlinked directories in the src prefixes are now conditionally
transformed into directories with symlinks in the dst dir. Notably
`intel-mkl`, `cuda` and `qt` has top-level symlinked directories that
previously resulted in empty directories in the view. We now avoid
cycles and possible exponential blowup by only expanding symlinks that:
- point to dirs deeper in the folder structure;
- are a fixed depth of 2.
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When view creation fails for some reason, remove it, so that the next
time around it can start from scratch.
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* py-cffi: add compiler flags to fix build with clang
For %clang@13.0.1, this avoids the
```
clang-13: warning: optimization flag '-ffat-lto-objects' is not supported [-Wignored-optimization-argument]
```
warning being turned into an error, and fixes this link error:
```
build/temp.linux-x86_64-3.10/c/_cffi_backend.o: file not recognized: file format not recognized
```
* style
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Currently `old_root` is computed by reading the symlink at `self.root`.
We should be more defensive in removing it by checking that it is in the
same directory as the new root. Otherwise, in the worst case, when
someone runs `spack env create --with-view=./view -d .` and `view`
already exists and is a symlink to `/`, Spack effectively runs `rm -rf /`.
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`file` was used to detect Python scripts with shebangs, so that the interpreter could be changed from <python prefix> to <view path>. With this change, we detect shebangs using Python instead, so that `file` is no longer required.
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Co-authored-by: cleathart <c.leathart@hotmail.co.uk>
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CCE needs additional compiler flags.
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The number of commit characters in patch files fetched from GitHub can change,
so we should use `full_index=1` to enforce full commit hashes (and a stable
patch `sha256`).
Similarly, URLs for branches like `master` don't give us stable patch files,
because branches are moving targets. Use specific tags or commits for those.
- [x] update all github patch URLs to use `full_index=1`
- [x] don't use `master` or other branches for patches
- [x] add an audit check and a test for `?full_index=1`
Co-authored-by: Todd Gamblin <tgamblin@llnl.gov>
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Known issues reports only 2 issues, among the bugs reported on GitHub.
One of the two is also outdated, since the issue has been solved
with the new concretizer. Thus, this commit removes the section.
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* This commit removes the Boost.with_default_variants to variants
that packages are precisely dependant upon. This is the first batch
of 20 packages with modified boost dependencies.
* Style fixes
* Tested bridger: works for gcc-4.9.3 and gcc-8.3.1
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