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2023-10-10openvkl: add 1.3.2 (#40392)Martin Aumüller1-1/+7
* openvkl: add 1.3.2 works with (and requires) embree@4 * openvkl: simplify formatting with f-string thank you for the suggestion in the review
2023-10-10w3emc: add v2.11.0 (#40376)Edward Hartnett1-2/+7
* added version 2.11.0 * more fixes
2023-10-10e4s arm stack: duplicate and target neoverse v1 (#40369)eugeneswalker2-13/+17
* e4s arm stack: duplicate and target both neoverse n1, v1 * remove neoverse_n1 target until issue #40397 is resolved
2023-10-10GCC: fix build with Apple Clang 15 (#40318)Adam J. Stewart1-0/+5
2023-10-10More helpful error when patch lookup fails (#40379)Harmen Stoppels2-10/+21
2023-10-10py-jupyter-packaging: remove duplicate packages (#38671)Adam J. Stewart15-39/+42
* py-jupyter-packaging: remove duplicate packages * Allow py-jupyter-packaging to be duplicated in DAG * Deprecate version of py-jupyterlab that requires py-jupyter-packaging at run-time
2023-10-10Update PyTorch ecosystem (#40321)Adam J. Stewart7-249/+139
* Update PyTorch ecosystem * py-pybind11: better documentation of supported compilers * py-torchdata: add v0.7.0 * Black fixes * py-torchtext: fix Python reqs * py-horovod: py-torch 2.1.0 not yet supported
2023-10-10find rocm fix (#40388)Miroslav Stoyanov1-1/+3
* find rocm fix * format fix * style fix * formatting is broken
2023-10-10git: optimize build by not setting CFLAGS (#40387)Harmen Stoppels1-2/+0
2023-10-10python: add 3.11.6 (#40384)Carlos Bederián1-2/+3
2023-10-09embree: checksum 4.3.0 (#40395)Martin Aumüller1-0/+1
2023-10-09rkcommon: checksum 0.11.0 (#40391)Martin Aumüller1-0/+1
2023-10-09openmm: new version 8.0.0 (#40396)Andrew W Elble1-1/+2
2023-10-09Add a new release sha256 hash (#37680)Tom Epperly1-1/+5
2023-10-09Add pika 0.19.1 (#40385)Auriane R1-0/+1
2023-10-09libzmq: add v4.3.5 (#40383)Dennis Klein1-1/+2
2023-10-09linaro-forge: added package file for rebranded product (#39587)kenche-linaro1-0/+134
2023-10-09paintor: new package @3.0 (#40359)George Young1-0/+37
* paintor: new package @3.0 * Update var/spack/repos/builtin/packages/paintor/package.py --------- Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk> Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2023-10-09Add: flux-pmix 0.4.0 (#40323)Vanessasaurus1-1/+2
* Automated deployment to update package flux-pmix 2023-10-05 * Pin exactly to flux-core 0.49.0 when between 0.3 and 0.4 * Update var/spack/repos/builtin/packages/flux-pmix/package.py Co-authored-by: Mark Grondona <mark.grondona@gmail.com> * Update var/spack/repos/builtin/packages/flux-pmix/package.py Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com> --------- Co-authored-by: github-actions <github-actions@users.noreply.github.com> Co-authored-by: Mark Grondona <mark.grondona@gmail.com> Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2023-10-09unparse: drop python 3.3 remnants (#40331)Harmen Stoppels1-20/+8
2023-10-09docs: update Spack prerequisites (#40381)Harmen Stoppels1-2/+1
2023-10-09py-pydevtool: add new package (#40377)Adam J. Stewart2-0/+39
2023-10-09fftx: add v1.1.3 (#40283)Patrick Broderick2-2/+4
2023-10-09build(deps): bump python-levenshtein in /lib/spack/docs (#40220)dependabot[bot]1-1/+1
Bumps [python-levenshtein](https://github.com/maxbachmann/python-Levenshtein) from 0.21.1 to 0.22.0. - [Release notes](https://github.com/maxbachmann/python-Levenshtein/releases) - [Changelog](https://github.com/maxbachmann/python-Levenshtein/blob/main/HISTORY.md) - [Commits](https://github.com/maxbachmann/python-Levenshtein/compare/v0.21.1...v0.22.0) --- updated-dependencies: - dependency-name: python-levenshtein dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-10-09py-s3cmd: Add new versions (#40212)Gavin John1-0/+3
* Add new versions of py-s3cmd * Use correct hashes
2023-10-09nimrod-aai: add v23.9. (#40303)Jacob King1-2/+10
2023-10-09py-jsonargparse: add v4.25.0 (#40185)Adam J. Stewart3-6/+22
2023-10-09racket packages: fix typo after multiple build systems support (#40088)Thomas Dickerson3-1/+22
2023-10-09elfutils: fix +debuginfod again with new libarchive versions (#40314)Jordan Galby1-2/+2
2023-10-09velvet: improved variants (#40225)Mike Renfro1-1/+48
2023-10-09Adding NVIDIA HPC SDK 23.9 (#40371)jmuddnv1-0/+14
2023-10-09feq-parse: add v2.0.3 (#40230)Joe Schoonover1-0/+3
2023-10-09parser: use non-capturing groups (#40373)Harmen Stoppels1-23/+23
2023-10-08Update CITATION.cff with conf dates (#40375)Mark (he/his) C. Miller1-0/+2
Add `start-date` and `end-date` to citation
2023-10-08py-setuptools: sdist + rpath patch backport (#40205)Harmen Stoppels3-199/+72
2023-10-08gettext: Add static and pic options (#37957)Alex Richert1-1/+11
2023-10-08py-tables: add 3.9.0 (#40340)Manuela Kuhn1-9/+17
* py-tables: add 3.9.0 * Add conflict with apple-clang
2023-10-08[py-tokenizers] added version 0.13.3 (#40360)Jen Herting1-0/+1
2023-10-08[py-tensorboardx] Added version 2.6.2.2 (#39731)Jen Herting1-1/+5
* [py-tensorboardx] Added version 2.6.2.2 * [py-tensorboardx] flake8 * [py-tensorboardx] requires py-setuptools-scm
2023-10-08py-torch-sparse: add v0.6.17 (#39495)Jen Herting1-2/+3
* [py-torch-sparse] New version 0.6.17 * [py-torch-sparse] added dependency on parallel-hashmap * [py-torch-sparse] - spack only supports python@3.7: - py-pytest-runner only needed with old versions
2023-10-08[py-lvis] New package (#39080)Jen Herting1-0/+36
* [py-lvis] New package * [py-lvis] flake8 * [py-lvis] os agnostic * [py-lvis] added comment for imported dependency * [py-lvis] style fix
2023-10-08py-bids-validator: add 1.13.1 (#40356)Manuela Kuhn1-0/+2
* py-bids-validator: add 1.13.1 * Fix style
2023-10-08[add] py-cylc-flow: new recipe (#39986)Lydéric Debusschère1-0/+36
* [add] py-cylc-flow: new recipe * py-cylc-flow: fix py-protobuf version Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * py-cylc-flow: fix py-colorama version Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com> * py-cylc-flow: Update dependence on py-aiofiles Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com> * py-cylc-flow: Update dependence on py-pyzmq Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com> * py-cylcflow: remove useless dependence * py-cylc-flow: fix indent * py-cylc-flow: fix argument in depends_on; move lines * py-cylc-flow: fix the type of the dependence py-setuptools --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com> Co-authored-by: LydDeb <lyderic.debusschere.tgcc@cea.fr>
2023-10-07Update CITATION.cff (#40363)Mark (he/his) C. Miller1-11/+41
You will note the `Cite this repository` link is not working. This commit fixes the underlying file... * `authors` was not indented * `authors` required by `preferred-citation` * `authors` list required at top level (I simply duplicated) * `"USA"` not correct country code * `month` requires an integer month number * Added URL to the actual pdf of the cited paper * Used `identifiers` for doi and LLNL doc number * added `abstract` copied from paper Various fixes were confirmed by `cffconvert` using `docker run -v `pwd`:/app citationcff/cffconvert --validate`
2023-10-07Remove warning for custom module configuration, when no module is enabled ↵Massimiliano Culpo3-47/+2
(#40358) The warning was added in v0.20 and was slated for removal in v0.21
2023-10-06yaksa: add version 0.3 (#40368)Ken Raffenetti1-0/+1
2023-10-06Python add v3.11.5 (#40330)Massimiliano Culpo1-2/+6
2023-10-06Change 'exit' to 'return' in setup-env.sh (#36137)Alex Richert1-1/+1
* Change 'exit' to 'return' in `setup-env.sh` to avoid losing shell in some cases when sourcing twice.
2023-10-06MFEM: add new version v4.6 (#40170)Veselin Dobrev2-16/+36
* [mfem] Initial changes for v4.6 * [@spackbot] updating style on behalf of v-dobrev * [mfem] Set the proper download link for v4.6
2023-10-06Update bufr recipe (#40033)Alex Richert4-14/+126
* Update bufr recipe * Add v12.0.1 * style fixes * remove test-related functionality for bufr * Re-add testing --------- Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>