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2022-06-14apex: fix compilation with binutils (#30638)Mikael Simberg1-0/+4
2022-06-14dbcsr: add versions up to v2.2.0 (#30891)Maciej Wójcik1-6/+17
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2022-06-14Make the IntelPackage fail successfully (#30773)G-Ragghianti1-0/+8
Co-authored-by: Robert Cohn <rscohn2@gmail.com>
2022-06-14simple-dftd3: add package and dependencies (#31046)Sebastian Ehlert5-10/+123
- add simple-dftd3 (version 0.6.0, 0.5.1) - add mctc-lib (version 0.3.0) - add toml-f (version 0.2.3) - update dftd4 (version 3.4.0, use mctc-lib as actual dependency) - update json-fortran (version 8.*, make static library PIC)
2022-06-14survey: add v1.0.5 (#31053)Jim Galarowicz1-1/+6
2022-06-14vectorclass-version2: move files to include folder (#31105)haralmha1-1/+4
2022-06-14gemma: add new package. (#31078)dlkuehn1-0/+30
Co-authored-by: David Kuehn <las_dkuehn@iastate.edu>
2022-06-14acts: add v19.2 (#31108)Hadrien G1-0/+1
2022-06-14legion: add HIP support (#31080)Richard Berger1-5/+33
2022-06-14hybrid-lambda: fix build tests (#30214)Qian Jianhua1-2/+5
2022-06-14hdf5: add conflict for broken @1.8.22+fortran+mpi (#31111)Seth R. Johnson1-4/+4
2022-06-14openssh: enable authentication via Kerberos through GSSAPI (#31086)Bernhard Kaindl1-0/+5
Add variant +gssapi to enable authentication via Kerberos through GSSAPI When openssh is installed at sites using Kerberos, openssh needs to auth via Kerberos through GSSAPI in order to work in such environments.
2022-06-13openfoam: update v2112 to latest patch (#31113)Mark Olesen1-0/+1
Co-authored-by: Mark Olesen <Mark.Olesen@esi-group.com>
2022-06-13Update HDF5 VOL async (#31011)Jean Luca Bez1-3/+4
* Update h5bench maintainers and versions * Include version 1.1 for h5bench * Correct release hash and set default version * Update .tar.gz version * Update HDF5 VOL async version and environment variable syntax
2022-06-13root: new version 6.26.04 (#31116)Wouter Deconinck1-0/+1
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2022-06-13exempi: add 2.6.1 and fix boost dependency (#31120)Manuela Kuhn1-9/+8
2022-06-13SEACAS: Clean up, add new versions (#31119)Greg Sjaardema1-11/+9
2022-06-13Add checksum for pacparser 1.4.0 (#31110)iarspider1-1/+2
2022-06-13Pin setuptools version in Github Action Workflows (#31118)Massimiliano Culpo2-2/+2
fixes #31109
2022-06-13netpbm: run custom test command (#31072)Qian Jianhua1-0/+9
* netpbm: run custom test command * fix styles * change method name
2022-06-13sloccount: add build-time dependency on flex (#31106)iarspider1-0/+1
2022-06-13SCR release v3.0, including components (#29924)Elsa Gonsiorowski, PhD9-12/+50
2022-06-13Remove filter operation for superlu-dist to avoid permission issues on ↵liuyangzhuan1-36/+10
read-only systems (#30970) * added package gptune with all its dependencies: adding py-autotune, pygmo, py-pyaml, py-autotune, py-gpy, py-lhsmdu, py-hpbandster, pagmo2, py-opentuner; modifying superlu-dist, py-scikit-optimize * adding gptune package * minor fix for macos spack test * update patch for py-scikit-optimize; update test files for gptune * fixing gptune package style error * fixing unit tests * a few changes reviewed in the PR * improved gptune package.py with a few newly added/improved dependencies * fixed a few style errors * minor fix on package name py-pyro4 * fixing more style errors * Update var/spack/repos/builtin/packages/py-scikit-optimize/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * resolved a few issues in the PR * fixing file permissions * a few minor changes * style correction * minor correction to jq package file * Update var/spack/repos/builtin/packages/py-pyro4/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * fixing a few issues in the PR * adding py-selectors34 required by py-pyro4 * improved the superlu-dist package * improved the superlu-dist package * moree changes to gptune and py-selectors34 based on the PR * Update var/spack/repos/builtin/packages/py-selectors34/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * improved gptune package: 1. addressing comments of tldahlgren in PR 26936; 2. adding variant openmpi * fixing style issue of gptune * changing file mode * improved gptune package: add variant mpispawn which depends on openmpi; add variant superlu and hypre for installing the drivers; modified hypre package file to add a gptune variant * fixing style error * corrected pddrive_spawn path in gptune test; enforcing gcc>7 * fixing style error * setting environment variables when loading gptune * removing debug print in hypre/package.py * adding superlu-dist v7.2.0; fixing an issue with CMAKE_INSTALL_LIBDIR * changing site_packages_dir to python_platlib * not using python3.9 for py-gpy, which causes due to dropped support of tp_print * more replacement of site_packages_dir * fixing a few dependencies in gptune; added a gptune version * adding url for gptune * minor correction of gptune * updating versions in butterflypack * added a version for openturns * added a url for openturns * minor fix for openturns * Update var/spack/repos/builtin/packages/openturns/package.py Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com> * added version2.1.1 for butterflypack * fixing a tag in butterflypack * minor fix for superlu-dist * removed file filter for superlu-dist * Update var/spack/repos/builtin/packages/superlu-dist/package.py Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com> * superlu-dist: add version detection for the testing; removing unused lines Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com> Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2022-06-13Fix spack style arbitrary git rev as base (#31019)Jordan Galby2-5/+25
Allow `spack style -b @` or `spack style -b origin/develop` to work as expected. Regression since spack 0.17 #25085
2022-06-13nvhpc: conflict with all compilers except for gcc (#31073)Sergey Kosukhin1-6/+6
2022-06-13Add flux-core v0.39.0 and v0.40.0 and flux-sched v0.23.0 (#31061)Mark Grondona2-0/+4
2022-06-13Fix tracy-client package (#31076)Mikael Simberg1-4/+4
2022-06-13Fix download URL for pcre package (#31077)Carson Woods1-1/+1
2022-06-13Fix packages that will break with PIL 10 (#31071)Adam J. Stewart2-3/+7
2022-06-13atompaw: add v4.2.0.1 (#31087)Simon Pintarelli1-1/+2
apply ifort patch including v4.2.0.0, but not for 4.2.0.1 anymore
2022-06-13opa-psm2: add v11.2.228 (#31089)Jack Morrison1-0/+3
2022-06-13adios2: add v2.8.1 (#31090)Erik Schnetter1-2/+2
2022-06-13py-py-spy: fix dependency on libunwind (#31013)Brice Videau1-0/+1
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2022-06-12py-breathe: new version 4.33.1 and fix dependencies (#31098)Seth R. Johnson1-4/+14
* py-breathe: new version 4.33.1 and fix dependencies * remove unused dependencies
2022-06-12Addllvmv1405 (#31099)Paul R. C. Kent1-0/+1
2022-06-12Limit Jasper version for WPS (#31088)marcosmazz1-1/+1
* Limit Jasper version for WPS Jasper@3: changed API and does not support interfaces used by WPS. This prevented ungrib.exe build and failed silently.
2022-06-12py-sphinxcontrib-bibtex: new version 2.4.2 (#31097)Seth R. Johnson1-8/+8
2022-06-11fix doubly shell quoting args to `spack spec` (#29282)Danny McClanahan5-19/+145
* add test to verify fix works * fix spec cflags/variants parsing test (breaking change) * fix `spack spec` arg quoting issue * add error report for deprecated cflags coalescing * use .group(n) vs subscript regex group extraction for 3.5 compat * add random test for untested functionality to pass codecov * fix new test failure since rebase
2022-06-10bugfix: preserve dict order for `Spec.dag_hash()` in Python 2 (#31092)Todd Gamblin2-3/+80
Fix a bug introduced in #21720. `spack_json.dump()` calls `_strify()` on dictionaries to convert `unicode` to `str`, but it constructs `dict` objects instead of `collections.OrderedDict` objects, so in Python 2 (or earlier versions of 3) it can scramble dictionary order. This can cause hashes to differ between Python 2 and Python 3, or between Python 3.7 and earlier Python 3's. - [x] use `OrderedDict` in `_strify` - [x] add a regression test
2022-06-10ripgrep: remove need for llvm (#31062)Asher Mancinelli1-7/+0
2022-06-10clingo: fix string formatting in error messages (#31084)Sergey Kosukhin1-2/+2
2022-06-10babelflow: fix conditional constraint in "when" decorator (#31057)Cyrus Harrison1-2/+2
2022-06-10enzyme: new version 0.0.32 (#31081)Valentin Churavy1-1/+7
Add LLDEnzyme to libs list
2022-06-10build(deps): bump actions/setup-python from 3.1.2 to 4 (#31059)dependabot[bot]4-19/+19
Bumps [actions/setup-python](https://github.com/actions/setup-python) from 3.1.2 to 4. - [Release notes](https://github.com/actions/setup-python/releases) - [Commits](https://github.com/actions/setup-python/compare/98f2ad02fd48d057ee3b4d4f66525b231c3e52b6...d09bd5e6005b175076f227b13d9730d56e9dcfcb) --- updated-dependencies: - dependency-name: actions/setup-python dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2022-06-09exago@1.4.1: : needs py-pytest (#31060)eugeneswalker1-0/+2
2022-06-09py-xdot requires explicit dependency on harfbuzz (#30968)Gregory Lee1-2/+7
2022-06-09py-kornia: add v0.6.5 (#31067)Adam J. Stewart1-0/+3
2022-06-09py-pillow: add v9.1.1 (#31068)Adam J. Stewart1-14/+7
2022-06-09py-pytorch-lightning: add v1.6.4 (#31069)Adam J. Stewart1-10/+26
2022-06-09py-timm: add v0.5.4 (#31070)Adam J. Stewart1-0/+4
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