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2020-10-10Add new package: backupninja (#18957)darmac1-0/+25
2020-10-10Add new package: universal-ctags (#18962)darmac1-0/+23
2020-10-10Add new package: vtable-dumper (#18964)darmac1-0/+22
2020-10-10pandoc: add variant for texlive (#18967)Derek Ryan Strong1-2/+4
* pandoc: add variant for texlive Modifies the pandoc package by adding a variant for texlive, which is only needed for PDF output. Enables this variant by default. * Fix whitespace
2020-10-10poplpler: fix patch for 0.90.1. (#18969)Toyohisa Kameyama2-1/+22
2020-10-10parallel-netcdf: patch for PGI on Cray (#18972)Sergey Kosukhin3-1/+69
2020-10-10jellyfish@1.1.11: Change the type of the array dna_codes to the signed type. ↵t-nojiri2-0/+24
(#19019) * jellyfish@1.1.11: Change the type of the array dna_codes to the signed type. * jellyfish@1.1.11: Add patch file
2020-10-10julea: Fix dependency typo and add new optional rocksdb dependency (#19045)Michael Kuhn1-1/+3
2020-10-10[dd4hep] update version v1.14.1 (#19056)vvolkl1-0/+4
up
2020-10-10fl: Fix for aarch64 (#19089)t-nojiri1-3/+15
* fl: Fix for aarch64 * fl: Revise the points indicated by the review.
2020-10-10superlu-mt: Add openmp flag to link command when using OpenMP (#19096)Tom Payerle1-1/+2
Fix for #19095 When given +openmp, add the correct compiler openmp flag to the link stage. This seems to be required for %intel compilers. I do this for all compilers, not just %intel, because it does not seem to harm anything and might be beneficial for others (and just seems 'correct').
2020-10-10meme: newer tarballs use a hyphen (#19222)Pariksheet Nanda1-1/+8
* meme: newer tarballs use a hyphen * meme: remove trailing whitespace for flake8
2020-10-10Update Metall package to v0.4 and v0.5 (#19223)Keita Iwabuchi1-1/+4
* Metall: add version 0.2 * Add Metall v0.3 * Update Metall package to v0.4 and v0.5.
2020-10-10Add cuSZ (#19228)Dingwen Tao1-0/+24
Co-authored-by: Dingwen Tao <tao@cs.ua.edu>
2020-10-10eigen: add a patch for 3.3.8 (#19229)Melven Roehrig-Zoellner1-0/+4
* eigen: add a patch for 3.3.8 * eigen: try to fix indenting
2020-10-10[acts] Add version 1.1 (#19230)Hadrien G1-0/+1
2020-10-10[whizard] Add compiler constraints and minimal ocaml version (#19231)Thomas Madlener1-2/+10
2020-10-10parallel-netcdf: added burst buffer variant (#19237)MichaelLaufer1-0/+5
Co-authored-by: michael laufer <michael.laufer@toganetworks.com>
2020-10-10Rust 1.47.0 (#19240)Andrew Gaspar1-0/+7
2020-10-10asdcplib: Added PATH of openssl installed by spack to configure_args. (#19243)h-denpo1-0/+9
2020-10-10Add MAGMA v2.5.4 release (#19245)Stan Tomov1-0/+1
This release does not have conflict with CUDA 11.
2020-10-10Add new package: powertop (#18904)darmac1-0/+21
2020-10-10py-scikit-image: bump version (#19153)Sajid Ali1-8/+19
* py-scikit-image: bump version * address reviewer comments * address reviewer comments * address reviewer comments * py-scikit-image : update dependencies : part 2 * cloudpicke is a docs only dependency, enable it with a variant if necessary * address reviewer comments * cleanup build vs run deps * address reviewer comments
2020-10-10make py-pillow the default for pil (#19251)Andrew Gaspar1-1/+1
py-pillow-simd is not portable to other architectures.
2020-10-10dealii: Reorganize package and add some new settings (#19137)Jean-Paul Pelteret1-115/+166
New variants: - cxxstd - examples
2020-10-09Add package for FLCL (#19252)Geoff Womeldorff1-0/+29
* Initial cut at FLCL spackage. Works with GCC so far. * Update spackage to list release which supports spack. Add @agaspar as a maintainer. Default unit tests to disabled when building with spack. * Change url to 0.2. * Nope, 0.3.
2020-10-09camp: new package (#19235)Danny Taller1-0/+44
2020-10-09Fixed the dependency of newer OpenMPI on current hwloc. Pathch (#17917)Brian Van Essen1-2/+4
contributed by Thorsten Kurth.
2020-10-09Use https for links (#19244)谭九鼎4-10/+10
2020-10-09Add new package: bitsery (#19090)Andreas Baumbach1-0/+16
2020-10-09Patch cereal (#19091)Andreas Baumbach2-0/+15
Change-Id: I9fe2a1490c8c31a4174aca4ed2e270aa1efa1a50 Co-authored-by: Eric Müller <mueller@kip.uni-heidelberg.de>
2020-10-08add package py-lmodule version 0.1.0 (#18856)Shahzeb Siddiqui1-0/+25
* add package py-lmodule version 0.1.0 Lmodule is tested with lmod >= 7.x. Lmod 6 has different json structure in spider which is not supported by lmodule
2020-10-08py-charm4py: new package (#18666)Tom Payerle2-0/+107
* py-charm4py: new package Charm++ for python Installation notes: 1) charm4py ships with its own charm++ tarball. It really wants to use the version it ships with. It also builds charm++ in a special way to produce libcharm.so (but not charmc, etc), so it does not seem worthwhile to try to hack to build using a spack installed charmpp. 2) Originally, the installation was failing due to unresolved cuda symbols when setup.py was doing a ctypes.CDLL of libcharm.so (in order to verify version?). This appears to be due to the fact that libcharm.so had undefined cuda symbols, but did not show libcudart.so as a dependency (in e.g. ldd output). To fix this, I had to add libcudart.so explicitly when linking libcharm.so, but since setup.py untars a tarball to build libcharm, the solution was a tad convoluted: 2a) Add a patch in spack to py-charm4py which creates a patchfile "spack-charm4py-setup.py.patch" which will modify a Makefile file (after it is untarred) to add the flags in env var SPACK_CHARM4PY_EXTRALIBS to the link command for libcharm.so 2b) The spack patch file also patches setup.py to run patch using the aforementioned patchfile to patch the Makefile after it is untarred, and sets the SPACK_CHARM4PY_EXTRALIBS variable appropriately in the setup environment. * Update var/spack/repos/builtin/packages/py-charm4py/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-charm4py/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * py-charm4py: flake8 fixes remove useless import Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-10-08Pymol 2.4 package update (#18618)perrymil1-6/+18
* Update Package, Pymol 2.4 * Fixed flake8 stuff * more style fixes * missing ( at EOF * added py-pymol 2.3 back this * extra line removal * white space in empty line removal * added libpng and py-pyqt5 to prefix_path
2020-10-08Add new package: py-bmap-tools (#18810)darmac1-0/+25
2020-10-08Add new package: py-azote (#18960)darmac1-0/+22
2020-10-08Add new package: py-walinuxagent (#18961)darmac1-0/+21
2020-10-08 Update of py-merlin for merlin-1.7.5 (#19069)Joe Koning1-2/+5
2020-10-08Update py-fortran-language-server (#19156)Andrew Gaspar1-1/+2
* Update py-fortran-language-server * Restore v1.11.1
2020-10-08fujitsu-ssl2: Add new package (#18498)takanori-ihara1-0/+133
fujisu-ssl2: Add new package with thread-parallel, SVE and scalapack support
2020-10-08Add mlperf-deepcam (#19206)rvinaybharadwaj1-0/+43
* Add mlperf-deepcam * Change mlperf-deepcam to reflect updated name of dependency
2020-10-08Add py-wandb (#19168)rvinaybharadwaj1-0/+33
2020-10-08Add py-sentry-sdk (#19173)rvinaybharadwaj1-0/+34
2020-10-08Add py-sanic (#19174)rvinaybharadwaj1-0/+32
* Add py-sanic * Update package.py Co-authored-by: Christoph Junghans <christoph.junghans@gmail.com>
2020-10-08openimageio: added v2.2.7.0 (#19227)t-nojiri1-0/+3
2020-10-07Add py-apache-beam (#19204)rvinaybharadwaj1-0/+46
2020-10-07Add py-avro-python3 (#19202)rvinaybharadwaj1-0/+20
* Add py-avro-python3 * Adding deprecation warning * Updating python versions * Fixing docstring indentation * Update package.py Co-authored-by: Christoph Junghans <christoph.junghans@gmail.com>
2020-10-07Add py-httpx (#19185)rvinaybharadwaj1-0/+24
2020-10-07Add py-fastavro (#19196)rvinaybharadwaj1-0/+34
2020-10-07Add py-h2 (#19191)rvinaybharadwaj1-0/+20
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