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2018-07-14clean up of spack clean (#8610)Andreas Baumbach1-24/+0
* update help of `clean --all` to include `-p` * remove old orphaned `.pyc` removal * restrict removal or orphaned pyc files to `lib/spack` and `var/spack`
2018-03-24Update copyright on LLNL files for 2018. (#7592)Todd Gamblin3-3/+3
2018-01-16Vendor ordereddict for python2.6 only (#6931)Massimiliano Culpo1-0/+4
* Vendor ordereddict for python2.6 only This commit substitutes the custom module 'ordereddict_backport' with the more known 'ordereddict' and vendors it only for python 2.6. Other supported versions of python will use 'collections.OrderedDict'. * Use absolute imports also for python 2.6 See PEP-328 for more information on the subject * Added provenance of vendored ordereddict
2017-11-04Replace github.com/llnl/spack with github.com/spack/spack (#6142)Todd Gamblin3-3/+3
We moved to a new GitHub org! Now make the code and docs reflect that.
2017-09-06Update copyright notices for 2017 (#5295)Michael Kuhn3-3/+3
2017-08-18sbang support: add node-js and fix luahealther1-0/+2
This adds sbang hook support for node-js and fixes the sbang filter for lua (the character class exclusion was swallowing newlines and reporting a false positive if lua was mentioned anywhere in the file).
2017-06-24Make LICENSE recognizable by GitHub. (#4598)Todd Gamblin3-3/+3
2017-06-14fix intltool_sbang issue #4191 (#4192)Luigi Calori1-4/+11
* fix intltool_sbang issue #4191 * add per dep even if already depending on perl-xml-parser * adding more comment, properly spaced
2017-05-08rework spack help (#3033)Todd Gamblin1-201/+21
- Full help is now only generated lazily, when needed. - Executing specific commands doesn't require loading all of them. - All commands are only loaded if we need them for help. - There is now short and long help: - short help (spack help) shows only basic spack options - long help (spack help -a) shows all spack options - Both divide help on commands into high-level sections - Commands now specify attributes from which help is auto-generated: - description: used in help to describe the command. - section: help section - level: short or long - Clean up command descriptions - Add a `spack docs` command to open full documentation in the browser. - move `spack doc` command to `spack pydoc` for clarity - Add a `spack --spec` command to show documentation on the spec syntax.
2017-05-03spack: no stacktrace if not in debug mode + fix emacs variant (#4098)Massimiliano Culpo1-0/+2
* spack: no stacktrace if not in debug mode + fix emacs variant * emacs: removed dead code
2017-05-01Allow user to specify profile sort column on the command line. (#4056)Todd Gamblin1-3/+42
- Add -P <STAT> argument so that caller can specify a sort column for cProfile. Can specify multiple columns with commas. e.g.: spack -P cumtime,module - Add --lines option to Spack spec to control number of profile lines displayed - Sort by time by default (because it works in all Python versions) - Show sort column options in command help. - Do a short profile run in the unit tests.
2017-03-31Spack works with Python 3Todd Gamblin1-2/+2
- Update version guard in spack script to allow python 3 - Update min required version in the docs
2017-03-31Convert Python 2 idioms to Python 2/3-compatible ones.Todd Gamblin1-2/+4
- convert print, StringIO, except as, octals, izip - convert print statement to print function - convert StringIO to six.StringIO - remove usage of csv reader in Spec, in favor of simple regex - csv reader only does byte strings - convert 0755 octal literals to 0o755 - convert `except Foo, e` to `except Foo as e` - fix a few places `str` is used. - may need to switch everything to str later. - convert iteritems usages to use six.iteritems - fix urllib and HTMLParser - port metaclasses to use six.with_metaclass - More octal literal conversions for Python 2/3 - Fix a new octal literal. - Convert `basestring` to `six.string_types` - Convert xrange -> range - Fix various issues with encoding, iteritems, and Python3 semantics. - Convert contextlib.nested to explicitly nexted context managers. - Convert use of filter() to list comprehensions. - Replace reduce() with list comprehensions. - Clean up composite: replace inspect.ismethod() with callable() - Python 3 doesn't have "method" objects; inspect.ismethod returns False. - Need to use callable in Composite to make it work. - Update colify to use future division. - Fix zip() usages that need to be lists. - Python3: Use line-buffered logging instead of unbuffered. - Python3 raises an error with unbuffered I/O - See https://bugs.python.org/issue17404
2017-03-31Update externals to work with Python 3Todd Gamblin1-0/+7
- Update YAML version to support Python 3 - Python 3 support for ordereddict backport - Exclude Python3 YAML from version tests. - Vendor six into Spack. - Make Python version-check tests work with Python 3 - Add ability to add version check exceptions with '# nopyqver' line comments.
2017-03-03Fix unexpected keyword error in Python 2.6 (#2954)Adam J. Stewart1-2/+1
2017-01-26Standardize argparse help messages (#2847)Adam J. Stewart1-7/+7
2016-12-29Fix issues related to the switchover to pytest. (#2685)Todd Gamblin1-8/+0
- Remove stale reference to `import nose` from `bin/spack` script. - Add `py` to externals (missing dependency for `pytest`)
2016-12-29unit tests: replace nose with pytest (#2502)Massimiliano Culpo1-18/+40
* Porting: substitute nose with ytest This huge commit substitutes nose with pytest as a testing system. Things done here: * deleted external/nose as it is no longer used * moved mock resources in their own directory 'test/mock/' * ported two tests (cmd/find, build_system) to pytest native syntax as an example * build_environment, log: used monkeypatch instead of try/catch * moved global mocking of fetch_cache to an auto-used fixture * moved global mocking from test/__init__.py to conftest.py * made `spack test` a wrapper around pytest * run-unit-tests: avoid running python 2.6 tests under coverage to speed them up * use `pytest --cov` instead of coverage run to cut down testing time * mock/packages_test: moved mock yaml configuration to files instead of leaving it in the code as string literals * concretize.py: ported tests to native pytest, reverted multiprocessing in pytest.ini as it was creating the wrong report for coveralls * conftest.py, fixtures: added docstrings * concretize_preferences.py: uses fixtures instead of subclassing MockPackagesTest * directory_layout.py: uses fixtures instead of subclassing MockPackagesTest * install.py: uses fixtures instead of subclassing MockPackagesTest * optional_deps.py: uses fixtures instead of subclassing MockPackagesTest optional_deps.py: uses fixtures instead of subclassing MockPackagesTest * packages.py: uses fixtures instead of subclassing MockPackagesTest * provider_index.py: uses fixtures instead of subclassing MockPackagesTest * spec_yaml.py: uses fixtures instead of subclassing MockPackagesTest * multimethod.py: uses fixtures instead of subclassing MockPackagesTest * install.py: now uses mock_archive_url * git_fetch.py: uses fixtures instead of subclassing MockPackagesTest * hg_fetch.py: uses fixtures instead of subclassing MockPackagesTest * svn_fetch.py, mirror.py: uses fixtures instead of subclassing MockPackagesTest repo.py: deleted * test_compiler_cmd.py: uses fixtures instead of subclassing MockPackagesTest * cmd/module.py, cmd/uninstall.py: uses fixtures instead of subclassing MockDatabase * database.py: uses fixtures instead of subclassing MockDatabase, removed mock/database * pytest: uncluttering fixture implementations * database: changing the scope to 'module' * config.py: uses fixtures instead of subclassing MockPackagesTest * spec_dag.py, spec_semantics.py: uses fixtures instead of subclassing MockPackagesTest * stage.py: uses fixtures instead of subclassing MockPackagesTest. Removed mock directory * pytest: added docstrings to all the fixtures * pytest: final cleanup * build_system_guess.py: fixed naming and docstrings as suggested by @scheibelp * spec_syntax.py: added expected failure on parsing multiple specs closes #1976 * Add pytest and pytest-cov to Spack externals. * Make `spack flake8` ignore externals. * run-unit-tests runs spack test and not pytest. * Remove all the special stuff for `spack test` - Remove `conftest.py` magic and all the special case stuff in `bin/spack` - Spack commands can optionally take unknown arguments, if they want to handle them. - `spack test` is now a command like the others. - `spack test` now just delegates its arguments to `pytest`, but it does it by receiving unknown arguments and NOT taking an explicit help argument. * Fix error in fixtures. * Improve `spack test` command a bit. - Now supports an approximation of the old simple interface - Also supports full pytest options if you want them. * Use external coverage instead of pytest-cov * Make coverage use parallel-mode. * change __init__.py docs to include pytest
2016-12-13Add a test to ensure package names have the right case. (#2562)Todd Gamblin1-2/+2
2016-12-05Use JSON for the database instead of YAML. (#2189)Todd Gamblin1-8/+0
* Use JSON for the database instead of YAML. - JSON is much faster than YAML *and* can preserve ordered keys. - 170x+ faster than Python YAML when using unordered dicts - 55x faster than Python YAML (both using OrderedDicts) - 8x faster than C YAML (with OrderedDicts) - JSON is built into Python, unlike C YAML, so doesn't add a dependency. - Don't need human readability for the package database. - JSON requires no major changes to the code -- same object model as YAML. - add to_json, from_json methods to spec. * Add tests to ensure JSON and YAML don't need to be ordered in DB. * Write index.json first time it's not found instead of requiring reindex. * flake8 bug.
2016-11-16-s now includes the file and line number with infoMatthew Krafczyk1-0/+3
The option -s now causes file and line number information to be printed along with any invocation of msg, info, etc... This will greatly ease debugging.
2016-10-30Bugfix: '::' only worked on top-level key in config.Todd Gamblin1-1/+2
- generalized and fixed to work with any key in YAML file - simplified schema writing, as well - add more unit tests for the config system - Rename test/yaml.py to test/spack_yaml.py - Add test/yaml.pyc to ignored pyc files.
2016-10-12Use cYAML if it is available in Python. (#2010)Todd Gamblin1-0/+10
2016-10-11Make `insecure` option work with curl AND git. (#1786)Todd Gamblin1-1/+1
2016-09-28Prohibit Python3 in Python version check. (#1872)Elizabeth Fischer1-2/+2
2016-09-22Fix sbang for perl (#1802)Eric1-2/+6
* Perform shebang fix for all files * Fix sbang for perl scripts Otherwise perl would look at the #! line and call sbang again, resulting in an infinite loop.
2016-08-30Keep dashes in command names, translate to underscoresAdam J. Stewart1-2/+3
2016-08-30Make subcommands importable, '-' -> '_', fixes #1642Adam J. Stewart1-2/+9
2016-08-29Change spack --profile sort key for 2.6 compatibility. (#1656)Todd Gamblin1-1/+1
2016-08-10Make Spack core PEP8 compliant.Todd Gamblin1-5/+10
2016-06-26Merge pull request #1030 from opoplawski/externalTodd Gamblin1-1/+1
Remove last two remaining from external imports
2016-06-23Make sbang handle luaTodd Gamblin1-0/+11
- use --! instead of #! for patched lua scripts.
2016-06-08Also remove from external from bin/spackOrion Poplawski1-1/+1
2016-05-26Fixed backwards compatibility for compilers.yaml config fileGregory Becker1-0/+3
2016-05-11Correct LLNL LGPL license template for clarity.Todd Gamblin3-16/+40
2016-04-12fix : proper update of config file (before it was discarding architectures ↵alalazo1-1/+1
that were not the current one) fixes #774
2016-03-05Fix #104, #54: issues with overlong shebang in deep directories.Todd Gamblin1-0/+84
This does several things: - Add `sbang`: a script to run scripts with long shebang lines. - Documentation for `sbang` is in `bin/sbang`. - Add an `sbang` hook that filters the `bin` directory after install and modifies any scripts wtih shebangs that are too long to use `sbang` instead. - `sbang` is at the top level, so it should be runnable (not much we can do if spack itself is too deep for shebang) - `sbang`, when used as the interpreter, runs the *second* shebang line it finds in a script. - shoud fix issues with too long shebang paths.
2016-01-25Fix variable name bugAdam J. Stewart1-4/+4
2016-01-19Merge branch 'mplegendre-multi_pkgsrc_roots' into developTodd Gamblin1-2/+2
- This moves var/spack/packages to var/spack/repos/builtin/packages. - Packages that did not exist in the source branch, or were changed in develop, were moved into var/spack/repos/builtin/packages as part of the integration. Conflicts: lib/spack/spack/test/unit_install.py var/spack/repos/builtin/packages/clang/package.py
2016-01-17Merge pull request #202 from scheibelp/features/unittest-xml-output-noseTodd Gamblin1-0/+8
Features/unittest xml output nose
2015-12-25Merge branch 'develop' into mplegendre-multi_pkgsrc_rootsTodd Gamblin2-3/+25
Conflicts: lib/spack/spack/cmd/create.py lib/spack/spack/cmd/extensions.py lib/spack/spack/cmd/fetch.py lib/spack/spack/cmd/uninstall.py lib/spack/spack/config.py lib/spack/spack/database.py lib/spack/spack/directory_layout.py lib/spack/spack/packages.py lib/spack/spack/spec.py
2015-12-21fix a few comment typosMike Nolta1-1/+1
2015-12-16added option to enable pdb debugGregory L. Lee1-0/+5
2015-12-09Change github.com/scalability-llnl to github.com/llnl everywhere.Todd Gamblin2-2/+2
2015-12-02Try to be more careful to only suppress the warning about nose already beingPeter Scheibel1-1/+1
imported. Other warnings should be output.
2015-11-28Fix spack.db -> spack.repo in bin/spackTodd Gamblin1-2/+2
2015-11-25On systems which have already installed nose (perhaps an older version)Peter Scheibel1-0/+8
importing nose (which is also in Spack's external/ directory) outputs a warning (since there is more than one nose package). This avoids printing the warning to the user.
2015-11-23Add a fix/warning so that stale .pyc files don't kill Spack.Todd Gamblin1-0/+15
- Can't think of a better way to do this. - The externals integration will cause spack to die in weird ways for users who just pull from develop.
2015-11-12Merge branch 'develop' into mplegendre-multi_pkgsrc_rootsTodd Gamblin1-1/+1
Conflicts: lib/spack/spack/__init__.py lib/spack/spack/directives.py lib/spack/spack/packages.py
2015-11-11Insert lib/spack/external into sys.path. This avoids cases where the systemPeter Scheibel1-0/+2
python install and lib/spack/external have the same library installed. This requires modifying the names of some modules in lib/spack/external in cases where both the system python and backported features of future python versions (i.e. after 2.6) are used (previously distinguished by "from external import X" and "import X").