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(#7692)
- spack.util.lock behaves the same as llnl.util.lock, but Lock._lock and
Lock._unlock do nothing.
- can be disabled with a control variable.
- configuration options can enable/disable locking:
- `locks` option in spack configuration controls whether Spack will use filesystem locks or not.
- `-l` and `-L` command-line options can force-disable or force-enable locking.
- Spack will check for group- and world-writability before disabling
locks, and it will not allow a group- or world-writable instance to
have locks disabled.
- update documentation
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* Set default provider for every virtual package
* Add unit test to ensure that every virtual package has a default provider explicitly set
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* `spack purge` now is `spack clean`
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* Add format to separate target and os for path
spec format can now handle separations of target and os for setting
up the path.
* Added ${PLATFORM} et al to spec.format()
${PLATFORM}, ${OS}, ${TARGET}
* Update tests
Updated tests and got rid of unnecessary code.
* Also update documentation to reflect this new ability.
* Add default path scheme to config.yaml
Added default path scheme to config.yaml. Users can overwrite this
section if they want.
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This provides options for hardware and software rendering with the
gl API and updates the vtk package to make use of those options:
* Create new "gl" virtual package, provided by mesa
* Add external-only "opengl" package, which represents a system
install that provides gl
* For vtk: prefer system gl implementation by default to get speed
up from hardware rendering. When software rendering is specifically
requested (+osmesa), try to use the llvmpipe approach, as it is
much faster.
* Make qt dependency optional for vtk
* Add basic support for VTK on osx
* qt: Depend on virtual gl package, rather than mesa impl
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There are two providers, pkgconf and pkg-config, with the former being
the default provider.
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* Module files now are generated using a template engine refers #2902 #3173
jinja2 has been hooked into Spack.
The python module `modules.py` has been splitted into several modules
under the python package `spack/modules`. Unit tests stressing module
file generation have been refactored accordingly.
The module file generator for Lmod has been extended to multi-providers
and deeper hierarchies.
* Improved the support for templates in module files.
Added an entry in `config.yaml` (`template_dirs`) to list all the
directories where Spack could find templates for `jinja2`.
Module file generators have a simple override mechanism to override
template selection ('modules.yaml' beats 'package.py' beats 'default').
* Added jinja2 and MarkupSafe to vendored packages.
* Spec.concretize() sets mutual spec-package references
The correct place to set the mutual references between spec and package
objects at the end of concretization. After a call to concretize we
should now be ensured that spec is the same object as spec.package.spec.
Code in `build_environment.py` that was performing the same operation
has been turned into an assertion to be defensive on the new behavior.
* Improved code and data layout for modules and related tests.
Common fixtures related to module file generation have been extracted
in `conftest.py`. All the mock configurations for module files have been
extracted from python code and have been put into their own yaml file.
Added a `context_property` decorator for the template engine, to make
it easy to define dictionaries out of properties.
The default for `verbose` in `modules.yaml` is now False instead of True.
* Extendable module file contexts + short description from docstring
The contexts that are used in conjunction with `jinja2` templates to
generate module files can now be extended from package.py and
modules.yaml.
Module files generators now infer the short description from package.py
docstring (and as you may expect it's the first paragraph)
* 'module refresh' regenerates all modules by default
`module refresh` without `--module-type` specified tries to
regenerate all known module types. The same holds true for `module rm`
Configure options used at build time are extracted and written into the
module files where possible.
* Fixed python3 compatibility, tests for Lmod and Tcl.
Added test for exceptional paths of execution when generating Lmod
module files.
Fixed a few compatibility issues with python3.
Fixed a bug in Tcl with naming_scheme and autoload + unit tests
* Updated module file tutorial docs. Fixed a few typos in docstrings.
The reference section for module files has been reorganized. The idea is
to have only three topics at the highest level:
- shell support + spack load/unload use/unuse
- module file generation (a.k.a. APIs + modules.yaml)
- module file maintenance (spack module refresh/rm)
Module file generation will cover the entries in modules.yaml
Also:
- Licenses have been updated to include NOTICE and extended to 2017
- docstrings have been reformatted according to Google style
* Removed redundant arguments to RPackage and WafPackage.
All the callbacks in `RPackage` and `WafPackage` that are not build
phases have been modified not to accept a `spec` and a `prefix`
argument. This permits to leverage the common `configure_args` signature
to insert by default the configuration arguments into the generated
module files. I think it's preferable to handling those packages
differently than `AutotoolsPackage`. Besides only one package seems
to override one of these methods.
* Fixed broken indentation + improved resiliency of refresh
Fixed broken indentation in `spack module refresh` (probably a rebase
gone silently wrong?). Filter the writers for blacklisted specs before
searching for name clashes. An error with a single writer will not
stop regeneration, but instead will print a warning and continue
the command.
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* Make jpeg a virtual dependency.
* Make 'libjpeg-turbo' the default implementation of 'jpeg'.
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* Refactor IntelInstaller into IntelPackage base class
* Move license attributes from __init__ to class-level
* Flake8 fixes: remove unused imports
* Fix logic that writes the silent.cfg file
* More specific version numbers for Intel MPI
* Rework logic that selects components to install
* Final changes necessary to get intel package working
* Various updates to intel-parallel-studio
* Add latest version of every Intel package
* Add environment variables for Intel packages
* Update env vars for intel package
* Finalize components for intel-parallel-studio package
Adds a +tbb variant to intel-parallel-studio.
The tbb package was renamed to intel-tbb.
Now both intel-tbb and intel-parallel-studio+tbb
provide tbb.
* Overhaul environment variables set by intel-parallel-studio
* Point dependent packages to the correct MPI wrappers
* Never default to intel-parallel-studio
* Gather env vars by sourcing setup scripts
* Use mpiicc instead of mpicc when using Intel compiler
* Undo change to ARCH
* Add changes from intel-mpi to intel-parallel-studio
* Add comment explaining mpicc vs mpiicc
* Prepend env vars containing 'PATH' or separators
* Flake8 fix
* Fix bugs in from_sourcing_file
* Indentation fix
* Prepend, not set if contains separator
* Fix license symlinking broken by changes to intel-parallel-studio
* Use comments instead of docstrings to document attributes
* Flake8 fixes
* Use a set instead of a list to prevent duplicate components
* Fix MKL and MPI library linking directories
* Remove +all variant from intel-parallel-studio
* It is not possible to build with MKL, GCC, and OpenMP at this time
* Found a workaround for locating GCC libraries
* Typos and variable names
* Fix initialization of empty LibraryList
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* alsa-lib: new package
* cups: new package
* icedtea: new package
* icedtea: adding JAVA_HOME variable
* alsa: removing placeholder
* icedtea: typo fix
* alsa: fixing formattting
* icedtea: formatting fixes and cleanup
* icedtea: additional cleanup
* jdk: adding provides('java') to jdk, setting jdk to default java.
* icedtea: adding jdk as a dependency
* java: changing depends_on('jdk') and similar entries to depends_on('java')
* icedtea: removing unused imports, trying to placate flake8.
* fastqc: fixing flake8 error
* bazel: fixing typo in java dependency
* jdk: changing provides java to a range
* icedtea: cleaning up. Splitting up checksums.
* icedtea: jdk dependency is build only
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* Added package for 'libaec'.
* New version for package 'libaec'.
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* Several improvements for the openfoam packages
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Refactor openfoam packages by adding an OpenfoamArch class
Use separate configure, build, install phases.
Provide FOAM_PROJECT_DIR dependent env for openfoam packages
- easier way to locate
Eliminate intermediate installation directories
- unneeded clutter.
- makes it less than easy to find the etc/bashrc file
Add versioning for all openfoam patches
- no certainty which parts (if any) will be needed in future versions,
especially if we strive to ensure that the upstream version builds
well with spack to begin with.
Support build of develop branches
- helps track build regressions for future openfoam releases
STYLE: use common/ and assets/ to provide additional (build) resources ...
* - adjust OpenFOAM provider
Move openfoam-com up front since this is the one being used as a base
for the others
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* Allow users to set parallel jobs in config.yaml
* Undo change from endash to emdash
* Remove parallel config, rename jobs to build_jobs
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* Set default providers for everything
* Add default OpenFOAM provider
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* Add missing dependencies to gawk
* Fix make check
* Add mawk packages and awk virtual dependency
* Use mawk instead of gawk to build ncurses
* Rearrange order of patches and dependencies
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* Set OS-specific default compilers
* Fix flake8 warnings
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- Added new preferences to config.yaml:
- source_cache
- misc_cache
- verify_ssl
- checksum
- dirty
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- Moved temp finding logic to spack.stage
- Updated stage tests
- Added tests for new path substaitution of $user, $spack, $tempdir
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- Added a schema for config.yaml
- Moved install tree configuration to config.yaml
- Moved etc/spack/install.yaml to etc/spack/defaults/config.yaml
- renamed install_area to "store", to use a term in common with guix/nix.
- in `config.yaml` file, it's called the `install_tree` to be more
intuitive to users.
- `install_tree` might've worked in the code, but `install_tree` is
already a global function in the spack namespace, from
llnl.util.filesystem.
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* py-pil: Does not build with Python3.
* Set py-pillow to be the default pil provider
* Update package.py
* Change to comments requested by adamjstewart
* Remove version constraint from extends(), avoid a Spack bug.
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- Default scope is versioned with spack and can be overridden by site
or user config.
- Default scope provides sensible default concretization preferences
for all of Spack.
- per-platform concretization scope can be added later (to force a
particular MPI on, e.g., Cray systems)
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The share/man path should be in prefix_inspections for MANPATH as
share/man is a common location for manual pages.
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Fixes #1072.
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