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It now additionally prints spec hash and options
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The functions returning the default scope to be modified or listed
have been moved from spack.cmd to spack.config.
Lmod now writes the guessed core compiler in the default modify scope
instead of the 'site' scope.
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closes #8916
Currently Spack ends with an error if asked to write lmod modules files
and the 'core_compilers' entry is not found in `modules.yaml`. After
this PR an attempt will be made to guess that entry and the site
configuration file will be updated accordingly.
This is similar to what Spack already does to guess compilers on first
run.
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* Update to latest version of pytest and dependencies
* Fix bug in installation tests
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- 'submodules' wasn't properly declared as an optional attribute for git
fetcher
- add it and add a test.
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This command prints out stats about all package versions, like so:
$ spack url stats
==> 6070 total versions for 2827 packages:
------------------------------------
url 5411 89.1%
schemes
https 3822 70.6%
http 1527 28.2%
ftp 27 0.5%
file 35 0.6%
checksums
sha512 6 0.1%
sha256 163 3.0%
sha1 81 1.5%
md5 5161 95.4%
------------------------------------
svn 3 0.0%
------------------------------------
hg 5 0.1%
------------------------------------
go 1 0.0%
------------------------------------
git 650 10.7%
security
no commit 384 59.1%
commit 266 40.9%
------------------------------------
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- Support for Python 3.3 isn't really needed, as nothing uses it as the
default system Python, and nearly everyone will have a newer Python 3
version installed.
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* More consistent colored messages from activate/deactivate
* Make 'activating' the default, make 'activated' the debug
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#fixes 9067
Unit tests were failing on a system with GNU Make v 4.1
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- add tests for build warnings and error messages
- simplify some code in build environment with plural() function
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- ruamel.yaml allows round-tripping comments from/to files
- ruamel.yaml is single-source, python2/python3 compatible
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#8223 replaced regex-based makefile target parsing with an invocation of
"make -q". #8818 discovered that "make -q" can result in an error for some
packages.
Also, the "make -q" strategy relied on interpreting the error code, which only
worked for GNU Make and not BSD Make (which was deemed acceptable at
the time). As an added bonus, this implementation ignores the exit code and
instead parses STDERR for any indications that the target does not exist; this
works for both GNU Make and BSD Make.
#8223 also updated ninja target detection to use "ninja -t targets". This does
not change that behavior but makes it more-explicit with "ninja -t targets all"
This also adds tests for detection of "make" and "ninja" targets.
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Fixes #9001
#8289 added support for install_tree and copy_tree to merge into an existing
directory structure. However, it did not properly handle relative symlinks and
also removed support for the 'ignore' keyword. Additionally, some of the tests
were overly-strict when checking the permissions on the copied files.
This updates the install_tree/copy_tree methods and their tests:
* copy_tree/install_tree now preserve relative link targets (if the symlink in the
source directory structure is relative, the symlink created in the destination
will be relative)
* Added support for 'ignore' argument back to copy_tree/install_tree (removed
in #8289). It is no longer the object output by shutil.ignore_patterns: you pass a
function that accepts a path relative to the source and returns whether that
path should be copied.
* The openfoam packages (currently the only ones making use of the 'ignore'
argument) are updated for the new API
* When a symlink target is absolute, copy_tree and install_tree now rewrite the
source prefix to be the destination prefix
* copy_tree tests no longer check permissions: copy_tree doesn't enforce
anything about permissions so its tests don't check for that
* install_tree tests no longer check for exact permission matching since it can add
file permissions
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- `imp` is deprecated and seems to have started having some weird
issues on certain Linux versions.
- In particular, the file argument to `load_source` is ignored on
arch linux with Python 3.7.
- `imp` is the only way to do imports in 2.6, so we'll keep it around for
now and use it if importlib won't work.
- `importlib` is the new import system, and it allows us to get
lower-level access to the import implementation.
- This consolidates all import logic into `spack.util.imp`, and make it
use `importlib` if it's avialable.
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* Fix spack versions behavior when no URL
* Unit test packages without URLs or safe versions
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Replace use of `shutil.copytree` with `copy_tree` and `install_tree` functions in `llnl.util.filesystem`.
- `copy_tree` copies without setting permissions. It should be used to copy files around in the build directory.
- `install_tree` copies files and sets permissions. It should be used to copy files into the installation directory.
- `install` and `copy` are analogous single-file functions.
- add more extensive tests for these functions
- update packages to use these functions.
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- dependency patching test didn't attempt to apply patches; just to see
whether they were on the spec.
- it applies the patch now and verifies that that patch was applied.
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* Branch with the meson build-system
* Fix build_environment for dual loads and add create code
* Add documentation
* Fixed option list
* Update build_system_guess for meson
* Fixed documentation errors
* Added meson to build and configure and updated documentation
* fix typos
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- cc cleanup caused a parsing regression in flag handling
- We added proper quoting to array expansions, but flag variables were
never actually converted to arrays. Old code relied on this.
This commit:
- Adds reads to convert flags to arrays.
- Makes the cc test check for improper space handling to prevent future
regressions.
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- flags were prepended in reverse order to args, but this makes it hard
to see what order they'll be in on the final command line.
- add them in the order they'll appear to make cc easier to maintain.
- simplify code for assembling the command line
- fix separator used in SPACK_SYSTEM_DIRS test
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- Add back ccache support to the wrapper.
- Add a regression test to make sure ccache is working properly.
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- This corrects most of the issues found by shellcheck
- This also uses ':' as the delimiter for SPACK_SYSTEM_DIRS, for
consistency with other variables.
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- filtering using sed causes most builds to slow down quite a bit, as the
compiler wrapper has to run sed many times, and *it* runs many times
- do the system directory parsing directly in bash
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- Add tests to ensure that RPATHs are not added in cc mode, which can
cause some builds to fail.
- Change cc.py to use pytest style
- Instead of writing out all the flags, break the flags down into
variables so that it's easy to read what each test is supposed to
check. This should make cc.py more maintainable in the future.
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- Adding -L and -Wl,-rpath to compile-only command lines ("cc mode" or
"-c") causes clang (if not also other compilers) to emit warnings that
confuse configure systems.
- Clang will print warnings about unused command-line arguments.
- This fix ensures that -L and -Wl,-rpath are not added if the compile
line is just building an object file with -c
- This also cleans up the cc script in several places.
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Spack currently prepends include paths, library paths, and rpaths to the
compile line. This causes problems when a header or library in the package
has the same name as one exported by one of its dependencies. The
*dependency's* header will be preferred over the package's, which is not
what most builds expect. This also breaks some of our production codes.
This restores the original cc behavior (from *very* early Spack) of parsing
compiler arguments out by type (`-L`, `-I`, `-Wl,-rpath`) and reconstituting
the full command at the end.
`<includes> <other_args> <library dirs> <rpaths>`
This differs from the original behavior in one significant way, though: it
*appends* the library arguments so that dependency libraries do not shadow
those in the build.
This is safe because semantics aren't affected by *interleaving* `-I`, `-L`,
and `-Wl,-rpath` arguments with others, only with each other (so the order of
two `-L` args affects the search path, but we search for all libraries on the
command line using the same search path).
We preserve the following:
1. Any system directory in the paths will be listed last.
2. The root package's include/library/RPATH flags come before flags of the
same type for any dependency.
3. Order will be preserved within flags passed by the build (except system
paths, which are moved to be last)
4. Flags for dependencies will appear between the root flags and the system
flags, and the flags for any dependency will come before those for *its*
dependencies (this is for completeness -- we already guarantee this in
`build_environment.py`)
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* Fix performance issue when compiling.
Spack was doing active wait when compiling, spoiling one core.
My fix consists in not setting any timeout for select, instead of
the previous 0 second.
* Fix comments about select.select timeout
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- `spack spec` now returns an error if given no specs
- removed superfluous trailing newline from `spack spec --yaml` output
(only one newline now)
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- This was a nasty workaround due to the way our compiler wrappers used
to work. We don't want to have to modify our elfutils installation to
install libdwarf.
- Since cd9691de5, we no longer need this because the package will always
come before dependencies in our include order.
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Spack currently prepends include paths, library paths, and rpaths to the compile line. This causes problems when a header or library in the package has the same name as one exported by one of its dependencies. The *dependency's* header will be preferred over the package's, which is not what most builds expect. This also breaks some of our production codes.
This restores the original cc behavior (from *very* early Spack) of parsing compiler arguments out by type (`-L`, `-I`, `-Wl,-rpath`) and reconstituting the full command at the end.
`<includes> <other_args> <library dirs> <rpaths>`
This differs from the original behavior in one significant way, though: it *appends* the library arguments so that dependency libraries do not shadow those in the build.
This is safe because semantics aren't affected by *interleaving* `-I`, `-L`, and `-Wl,-rpath` arguments with others, only with each other (so the order fo two `-L` args affects the search path, but we search for all libraries on the command line using the same search path).
We preserve the following:
1. Any system directory in the paths will be listed last.
2. The root package's include/library/RPATH flags come before flags of the same type for any dependency.
3. Order will be preserved within flags passed by the build (except system paths, which are moved to be last)
4. Flags for dependencies will appear between the root flags and the system flags, and the flags for any dependency will come before those for *its* dependencies (this is for completeness -- we already guarantee this in `build_environment.py`)
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fixes #8736
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The `--dependencies` and `--exclude` flags are now arguments to the `spack view`
comand rather than the `spack view symlink` command.
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- previously, output could be confusing when deptypes were only shown for
one dependent when a node had *multiple* dependents
- also fix default coverage of `Spec.tree()`: it previously defaulted to
cover only build and link dependencies, but this is a holdover from
when those were the only types.
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- Previously, Spack didn't check the arguments you put in version()
directives.
- So, you could do something like this, where there are arguments for a
URL fetcher AND for a git fetcher:
version('1.0', md5='abc123', git='https://foo.bar', commit='feda2343')
- Now, we check the arguments before constructing a fetcher, to ensure
that each package has *only* arguments for a single type of fetcher.
- Also added `test_package_version_consistency()` to the `package_sanity`
test, so that all builtin packages are required to have valid
`version()` directives.
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- this test is checking the package *repository*, not the database.
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- packagers can specify two top-level fetch URLs if one is `url`
- e.g., `url` and `git` or `url` and `svn`
- allow only one VCS fetcher so we can differentiate between URL and VCS.
- also clean up fetcher logic and class structure
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- ensure that packages can't have more than one of git, hg, svn, or url
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