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2018-05-15Generate CDash reports for build/install stepZack Galbreath1-2/+33
2018-05-15CDash report for concretization errorsZack Galbreath2-1/+24
Capture any concretization errors and record them in a CTest Update.xml file.
2018-05-15CDash report for configure stepZack Galbreath2-8/+112
Generate CTest XML file containing configure output
2018-05-15Capture source line number in CTest log parserZack Galbreath1-1/+1
2018-05-15Fix typo in commentZack Galbreath1-1/+1
2018-05-15Add CDash as a valid reporting formatZack Galbreath1-1/+2
2018-05-15Initialize report generator before parsing specsZack Galbreath2-7/+10
This will allow us to generate reports for concretization errors
2018-05-15Allow --overwrite and --log-format to be used togetherZack Galbreath1-36/+35
Restructure the logic of the spack install command to allow these two command-line arguments to be used at the same time.
2018-05-15Format-agnostic data structure for reportsZack Galbreath1-43/+45
Replace the JUnit-specific terms 'testsuite' and 'testcase' with 'spec' and 'package', respectively.
2018-05-08Packages can tune the list of files to be archived at the end of install (#7760)Massimiliano Culpo4-0/+81
Fixes #2781 This PR introduces a new attribute for packages called `archive_files`, which designates files that should be saved from a package build (e.g. the config.log generated during autotools builds). The attribute contains a list of glob expressions; Any file that matches will be archived in the `<prefix>/.spack/archived-files` directory. Errors that occur when archiving files are collected and reported in a file named `<prefix>/.spack/archived-files/errors.txt`. `AutotoolsPackage` and `CMakePackage` provide a sensible default override for this attribute.
2018-05-07Specs add a space before dependencies (#7942)Massimiliano Culpo3-26/+45
fixes #7941 Modified string representation of Specs to add a space before deps Unit-tests have been modified accordingly Added a test for regression on #7941
2018-05-06Support *.TAR.gz extension. (#7973)健美猫1-1/+1
2018-05-05Fix coloring of URLs containing @ symbol (#7799)Adam J. Stewart1-3/+3
* Fix coloring of URLs containing @ symbol * Fix coloring of descriptions containing @ symbol
2018-05-05Set default provider for every virtual package (#7784)Adam J. Stewart1-0/+10
* Set default provider for every virtual package * Add unit test to ensure that every virtual package has a default provider explicitly set
2018-05-01Fix initialization of defaults in yaml schema validation (#7959)scheibelp2-2/+47
Fixes #7924 Spack's yaml schema validator was initializing all instances of unspecified properties with the same object, so that updating the property for one entry was updating it for others (e.g. updating versions for one package would update it for other packages). This updates the schema validator to instantiate defaults with separate object instances and adds a test to confirm this behavior (and also confirms #7924 without this change).
2018-04-28Document how to run unit tests with print statements (#7860)Adam J. Stewart1-0/+7
2018-04-26Allow len(Version) to return number of split components. (#7918)Chris Green2-0/+11
2018-04-26XL Fortran compiler >= 16.0 is synced with C compiler version (#7887)serbanmaerean2-0/+12
* Use reported version of IBM XL Fortran compiler for compiler versions >= 16.0. Starting with the April 2018 release, the IBM XL C and Fortran compilers report the same version, 16.0. Consequently, there is no need to downgrade the Fortran compiler version to match that of the C compiler.
2018-04-26Use GitLab's API endpoint for fetching a git snapshot. (#7881)Sergey Kosukhin2-4/+25
* Use GitLab's API endpoint for fetching a git snapshot. * More GitLab packages use the API. * find_list_url for GitLab's API URLs. * Flake8 * Url for 'hacckernels'. * Check GitLab API regexps before the non-API ones.
2018-04-26config_args does NOT apply to CMakePackage. (#7917)健美猫1-1/+1
2018-04-18Add -d option to diy to specify source path move -j to common args (#5963)Matthew Scott Krafczyk3-4/+20
2018-04-18Fix bug/oversight in formatting error message. (#7810)Elizabeth Fischer1-1/+1
2018-04-17Activation of activated package just msg's (#7752)George Hartzell1-1/+2
Activating a package that is already activated now sends a `tty.msg` and returns. ``` -bash-4.2$ ~/spack/bin/spack activate aspell6-en ==> Package aspell6-en/lc4v24f is already activated. ```
2018-04-17Better error message for spack providers (#7748)Massimiliano Culpo3-7/+116
* Better error message for spack providers fixes #1355 `spack providers` now outputs a sensible error message if non-virtual specs are provided as arguments: ``` $ spack providers mpi zlib petsc ==> Error: non-virtual specs cannot be part of the query [zlib, petsc] ``` Formatting of the output changed slightly. * Calling 'spack providers' without arguments print the virtual pkg list Also, the error message in case of a wrong parameter has been improved to show the list of valid packages. * Avoid printing headers if stdout is not a tty * The provider list is formatted with colify if not in a tty * Added a test to check the list of providers returned from the command
2018-04-13cray: add comment about module use in packages.yaml (#7751)Cameron Smith1-1/+8
This advises users to prefer `modules:` entries in `packages.yaml` on Cray.
2018-04-13Fix when_spec inheritance for extensions (#7746)becker331-1/+1
Popping the when spec from kwargs in the extends directive breaks class inheritance. Inheriting classes do not find their when spec. We now get the when spec from kwargs instead, leaving it to be found by any downstream package classes.
2018-04-11Package.provides account for v deps that are provided conditionally (#7716)Massimiliano Culpo2-1/+13
fixes #7705 Package.provides now checks constraints to ensure that a spec provides a given virtual package. Note that 'strict=True' is not passed to satisfies as this function is also used during concretization.
2018-04-04make view understand hashes (#7573)healther1-4/+5
Fixes #7548 This updates the "spack view" command to use the same parsing logic as "spack install" on the user-provided specs. For example you can provide a DAG hash to refer to an exact installed spec instead of specifying name, compiler, etc.
2018-04-03Fix bug in test_find_with_globbing unit test (#7652)Adam J. Stewart1-1/+1
2018-04-03Do not call sys.exit() in except block (#7659)Zack Galbreath3-12/+31
When an invalid spec is encountered by `parse_specs()` we now raise a `SpackError` instead of calling `sys.exit()`
2018-03-31Avoid double 'lib' for packages whose name already starts with lib (#7651)Adam J. Stewart4-12/+51
2018-03-28mirrors.yaml: does not expand ~ (#7631)Axel Huebl1-4/+4
Use `$HOME` for cli commands in `mirrors.yaml` and add "username" example strings in the file itself.
2018-03-27Fix buildcache relocate: only skip if rpaths are relative (#7605)Patrick Gartung1-1/+1
This fixes a check that decides when to skip buildcache relocation. Originally the check was flawed in two ways: it would skip if the source prefix matched the destination prefix, which no longer matters since the source prefix is replaced with a placeholder (so it always needs to be updated); it also would skip relocation if the rpaths were not relative, when in fact it should be the opposite (binaries without relative rpaths *should* be relocated, and those without don't need it).
2018-03-24Update copyright on LLNL files for 2018. (#7592)Todd Gamblin293-295/+295
2018-03-24Avoid stat-ing all packages at startup. (#7587)Todd Gamblin1-3/+9
- FastPackageChecker was being called at startup every time Spack runs, which takes a long time on networked filesystems. Startup was taking 5-7 seconds due to this call. - The checker was intended to avaoid importing all packages (which is really expensive) when all it needs is to stat them. So it's only "fast" for parts of the code that *need* it. - This commit makes repositories instantiate the checker lazily, so it's only constructed when needed.
2018-03-23Remove case consistency check at startup. (#7585)Todd Gamblin1-110/+0
- This was needed when we transitioned to all lowercase packages because git didn't handle case changes well on case-insensitive filesystems. - Now it just adds extra stat calls to startup, and we check for all-lowercase package names in tests, so we'll remove it. - people using really old versions of Spack can re-clone.
2018-03-23Cray clean environment (#7582)Mario Melara2-3/+19
* Create unload_module method Extract code from load_module into unload_module. * Unload modules to create a clean env on Cray removes cray-libsci, cray-mpich and darshan to prevent any silent linking with those packages.
2018-03-23Increment Spack version (#7565)Adam J. Stewart1-1/+1
2018-03-23Grab crayos version from PrgEnv module versions (#7583)becker331-3/+11
2018-03-23Add the ability to separate architecture in path scheme (#4329)Mario Melara3-6/+67
* Add format to separate target and os for path spec format can now handle separations of target and os for setting up the path. * Added ${PLATFORM} et al to spec.format() ${PLATFORM}, ${OS}, ${TARGET} * Update tests Updated tests and got rid of unnecessary code. * Also update documentation to reflect this new ability. * Add default path scheme to config.yaml Added default path scheme to config.yaml. Users can overwrite this section if they want.
2018-03-22Speedup the default 'libs' property search ... (#7553)Veselin Dobrev1-24/+21
* Speedup the default 'libs' property search - important for external packages. * As advised by @alalazo, use tuples instead of lists inside _libs_default_handler.
2018-03-22Fix error raising during install with Python 3 (#6894)Adam J. Stewart1-2/+8
* Fix error raising during install with Python 3 * Fix env_path too
2018-03-22Record installation date and time in DB (#7334)Massimiliano Culpo6-51/+262
* Added installation date and time to the database Information on the date and time of installation of a spec is recorded into the database. The information is retained on reindexing. * Expose the possibility to query for installation date The DB can now be queried for specs that have been installed in a given time window. This query possibility is exposed to command line via two new options of the `find` command. * Extended docstring for Database._add * Use timestamps since the epoch instead of formatted date in the DB * Allow 'pretty date' formats from command line * Substituted kwargs with explicit arguments * Simplified regex for pretty date strings. Added unit tests.
2018-03-22Recover the old patching order for packages. (#7558)Massimiliano Culpo1-1/+1
fixes #7543 This is very likely an hot-fix, while a more permanent solution is needed. See this comment for more insight: https://github.com/spack/spack/pull/7193#discussion_r176448831 on the problem.
2018-03-21Propagate architecture information during concretization (#7412)becker332-17/+57
This updates architecture concretization to * Search for the nearest parent in the DAG for architecture information rather than defaulting to the root of the DAG * Propagate architecture settings transitively, such that if for example the target is set at the root of the dag it will set the same target on indirect dependencies (assuming no intermediate dependency specifies a separate target). Previously this occurred in general but under some conditions did not, for example if an intermediate dependency specified some subset of architecture properties.
2018-03-21Enable creation of mirrors for systems with different compilers (#5153)scheibelp3-13/+50
* Create mirror for system with different compilers Spack concretizes the spec provided by the user in "spack mirror create" to ensure downloading the right dependencies. Under normal circumstances concretization requires that the chosen compiler exists on the system, but this is not required when creating download mirrors for other systems, so this requirement is removed in that case. * Add test for disabling compiler existence check * Update compiler existence checking logic * improve test for disabling compiler existence check
2018-03-21Generate spack docset for Dash. (#6981)健美猫1-1/+7
2018-03-21make py-setuptools a run-time-only dep for py-basemap and patch pytho… (#6989)Gregory Lee1-2/+8
* make py-setuptools a run-time-only dep for py-basemap and patch python package to only apply setuptools flag for build deps * py-qtconsole does not require setuptools
2018-03-21Support MD5 with a warning when OpenSSL is compiled in FIPS mode (#7531)scheibelp1-3/+48
* This allows Spack to work with MD5 hashes on machines with openssl in FIPS mode. * We are still using MD5 for validation in many places, and a later PR will replace all uses of MD5 with SHA256. * This is a quick fix until that happens.
2018-03-21patch config.guess for ARM (aarch64) (#7427)Gregory Lee1-3/+3