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2017-01-07Preliminary RPackage class (#2761)Adam J. Stewart1-7/+1
2017-01-04Standardize package names: lower-case, not Mixed_CASE (#2475)Elizabeth Fischer1-1/+1
* Rename packages * Upcasing depends_on() in packages. * Downcased extends('r') * Fixed erroneously changed URL that had slipped through. * Fixed typo * Fixed link from documentation into package source code. * Fixed another doc problem. * Changed underscores to dashes in package names. * Added test to enforce lowercase, no-underscore naming convention. * Fix r-xgboost * Downcase more instances of 'R' in package auto-creation. * Fix test. * Converted unit test packages to use dashes not underscores * Downcase `r` in the docs. * Update module_file_support.rst Fix r->R for class R.
2016-06-16Add list_url for old versions.Glenn Johnson1-3/+4
2016-06-16Tweak how R packages are built.Glenn Johnson1-2/+2
Add bzip2 as a dependency to base R. Switch from installing the R packages from tar files to installing from the extracted directory. This is more in line with a standard install and also allows installing from VCS. Use the Bioconductor version for BiocGenerics and future Bioconductor packages. Suffix the package with 'bioc-$version' to indicate which Bioconductor release the package is a part of. This is actually more important than the actual version attached to individual packages although those are subject to change within the Bioconductor branch.
2016-06-16Clean up R extensionsGlenn Johnson1-2/+4
Run the existing R extension packages through autopep8 to clean up.
2016-05-11Correct LLNL LGPL license template for clarity.Todd Gamblin1-0/+24
2016-04-24Reformat description text.Glenn Johnson1-1/+9
2016-04-06Add r-filehash to test version naming.Glenn Johnson1-0/+14