Age | Commit message (Collapse) | Author | Files | Lines | |
---|---|---|---|---|---|
2016-08-02 | Remove useless `def unpack` | George Hartzell | 1 | -3/+0 | |
Before I learned that I was stumbling over a real but (#1308), I thought I needed to arrange for the fetcher to skip the unpack step. This commit removes the useful `def unpack`. | |||||
2016-08-02 | Flake8 cleanup. | George Hartzell | 1 | -1/+2 | |
2016-08-02 | Touch up variant comment | George Hartzell | 1 | -1/+1 | |
2016-08-02 | Use "resource" machinery to manage cpanm tarball | George Hartzell | 1 | -8/+13 | |
Use the resource machinery to fetch/cache/unpack/... the App::cpanminus tarball. - this hardcodes the version, I can't figure out how to use a variant to hold/set the value and access it in the resource(). - change up the install to use the `with working_dir()` meme. | |||||
2016-08-02 | Add the std spack header to perl/package.py | George Hartzell | 1 | -0/+24 | |
Stole the example header from antlr/package.py, included it at the top of perl/package.py. | |||||
2016-08-02 | Make running perl's tests conditional | George Hartzell | 1 | -1/+2 | |
Make running perl's tests conditional, one must now specify the `--run-tests` flag to the `spack install` command in order to run the tests. On one system (8 core, 16GB Digital Ocean Droplet), installing without tests takes 3 minutes, with tests takes 16 minutes. | |||||
2016-08-02 | Make the cpanm version a variant | George Hartzell | 1 | -2/+5 | |
Rather than hard-coding the verison of `cpanm` that's [optionally] installed into the core, make it a variant with a default value of '1.7042'. Also discovered that `prefix + 'bin'` is the same as `prefix.bin`, so embetter that bit of code. | |||||
2016-08-02 | Add perl package | George Hartzell | 2 | -0/+1117 | |
Add perl package, based on [work by justintoo](https://github.com/LLNL/spack/pull/105). He had too many things pulled into that pull request, this just adds a perl package. Support the current releases on the past three minor branches. Run perl's tests before installing. Install cpanm into the core (makes building on top of this perl *much* simpler). Controlled by a variant. | |||||
2016-08-02 | Add package for texlive | George Hartzell | 1 | -0/+56 | |
2016-08-02 | Ack should depends_on('perl') | George Hartzell | 1 | -3/+6 | |
Add a depends_on('perl') and rewrite the script's `#!` line to refer to that Perl's `perl` executable. | |||||
2016-08-02 | Remove unnecessary imports. | George Hartzell | 1 | -2/+0 | |
Now that it's sporting a cleaner install method, these imports are unnecessary. | |||||
2016-08-02 | Remove override of `unpack(self)` | George Hartzell | 1 | -3/+0 | |
I cargo culted that from my *nextflow* package. I [thought I] needed it to work around Spack trying to use tar to unpack something that was neither a tar ball nor unpackable. This package works fine without it. In retrospect, the error that I was seeing in the *nextflow* package was probably this problem #1308. | |||||
2016-08-02 | Use cleaner mech to install script | George Hartzell | 1 | -7/+3 | |
Use @adamjstewart's nicer bit of python code in the install method. | |||||
2016-08-02 | Add package for ack | George Hartzell | 1 | -0/+57 | |
Add a package for [ack](http://beyondgrep.com/install/). Simply install the fatpacked script. It uses '#!/usr/bin/env perl' and it very much not choosy about what perl it needs. For now just trust that there's one available, perhaps someday we can/should uncomment the depends_on('perl'). Follows the methodolgy I used in nextflow. Has the same uninstall/install problem that nextflow has, there is an issue in progress for that: https://github.com/LLNL/spack/issues/1308. Tested on CentOS7. | |||||
2016-08-02 | Update several R packages (r-shiny prereqs) | George Hartzell | 3 | -6/+6 | |
r-jsonlite 0.0.21 -> 1.0 r-mime 0.4 -> 0.5 rcpp 0.12.5 -> 0.12.6 CRAN is funny. The older versions of these packages are still available in package specific directories but the current version is not there, so I don't see any way to make the older versions work. | |||||
2016-08-02 | Fix whitespace, make flake8 happ{y,ier}. | George Hartzell | 1 | -1/+1 | |
2016-08-02 | Add standard header, use spack helpers | George Hartzell | 1 | -5/+26 | |
Added the standard header (stolen from R). Touched up the install to use set_executable rather than doing it myself. | |||||
2016-08-02 | First cut package for nextflow, has issues | George Hartzell | 1 | -0/+24 | |
This is my first cut at a package to support nextflow. It's also my first package. It works, but has issues. I'm going to submit a pull request and get some coaching on how to deal with it. One issue particular: if I install, then uninstall, then try to install again (which uses the cached copy of the "distribution file"), it explodes. | |||||
2016-08-02 | Fix flake8 issues. | Glenn Johnson | 2 | -3/+6 | |
2016-08-02 | kdiff3: add license block | Denis Davydov | 1 | -0/+24 | |
2016-08-02 | added plumed | Gilles Fourestey | 1 | -0/+82 | |
* plumed : first version * plumed : added dependencies and docs | |||||
2016-08-02 | atlas: revert to lapack 3.5.0 | Denis Davydov | 1 | -2/+4 | |
2016-08-02 | atlas: flake8 fixes | Denis Davydov | 1 | -5/+5 | |
2016-08-02 | atlas: add install_test | Denis Davydov | 3 | -0/+77 | |
2016-08-02 | atlas: set (blas|lapack)_shared_lib | Denis Davydov | 1 | -0/+13 | |
2016-08-02 | atlas: fix shared libs; set compilers | Denis Davydov | 1 | -2/+21 | |
2016-08-02 | atlas: fix urls and use lapack 3.6.0 | Denis Davydov | 1 | -4/+4 | |
2016-08-02 | libxau: mark pkg-config as build-type dependency | Denis Davydov | 1 | -1/+1 | |
2016-08-02 | kdiff3: initial version of the package | Denis Davydov | 1 | -0/+20 | |
2016-08-02 | libxau: add missing dependency | Denis Davydov | 1 | -2/+2 | |
2016-08-01 | Formatting changes for flake8. | Kelly (KT) Thompson | 2 | -2/+4 | |
2016-08-01 | Provide correct download urls and additional dependencies. | Kelly (KT) Thompson | 2 | -1/+12 | |
2016-08-01 | Merge remote-tracking branch 'upstream/develop' into gktplus3-deps | 65 | -46/+2998 | ||
2016-08-01 | Merge pull request #1343 from glennpj/r_unfilter | becker33 | 1 | -15/+29 | |
R extension dependencies with compiler wrapper | |||||
2016-08-01 | Merge pull request #1234 from mwilliammyers/package-opencv | becker33 | 1 | -21/+156 | |
Update opencv package | |||||
2016-08-01 | Merge pull request #1348 from glennpj/rcurl | becker33 | 1 | -1/+2 | |
r-curl update and changed remote archive | |||||
2016-08-01 | Merge pull request #1381 from davydden/pkg/mkl_linux | becker33 | 3 | -8/+23 | |
MKL linux fixes | |||||
2016-08-01 | Merge pull request #1365 from hartzell/feature/add-package-for-tree | becker33 | 1 | -0/+46 | |
Add package for tree | |||||
2016-08-01 | Merge pull request #1374 from hartzell/bug/fix-jdk-import-of-distutils | becker33 | 1 | -1/+1 | |
Bug: fix jdk package's use of distutils | |||||
2016-08-01 | Merge pull request #1367 from adamjstewart/features/pgi | becker33 | 1 | -0/+1 | |
Add latest version of PGI | |||||
2016-08-01 | Merge pull request #1413 from mdevlin1/fixes/libxsmm | becker33 | 1 | -1/+1 | |
Fixed libxsmm package | |||||
2016-08-01 | Merge pull request #1359 from sknigh/libhio | becker33 | 1 | -0/+45 | |
added libhio package | |||||
2016-08-01 | fixed libxsmm makefile filter | Mitchell Devlin | 1 | -1/+1 | |
2016-08-01 | Add latest version of PGI | Adam J. Stewart | 1 | -0/+1 | |
2016-08-01 | Allow git to depend on gettext now that it works | Adam J. Stewart | 1 | -14/+11 | |
2016-08-01 | Use proper deptype so that spack activate works | Adam J. Stewart | 1 | -3/+3 | |
2016-08-01 | pkg-config should be a build dependency only | Adam J. Stewart | 2 | -1/+5 | |
2016-08-01 | Fix undefined symbols by building shared libraries | Adam J. Stewart | 5 | -20/+21 | |
2016-08-01 | Tell MEEP where to find libctl | Adam J. Stewart | 1 | -1/+1 | |
2016-08-01 | Final fixes to get libctl working | Adam J. Stewart | 2 | -5/+6 | |