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2018-02-06LIBXSMM 1.8.3 (#7183)Hans Pabst1-1/+2
2018-02-06samblaster: Create new package (#7188)Eric1-0/+40
2018-02-06py-localcider: Create new package (#7189)Eric1-0/+39
2018-02-06oclint: new package (#7076)Geoffrey Oxberry2-0/+99
2018-02-05angsd: new version, and conflict for newer htslib with old version (#7122)Levi Baber1-0/+2
2018-02-04Update fish url for fish 2.7.1 (#7089)Mark Meredith1-1/+2
2018-02-03Update Nek5000 package to Version 17 (#7178)Thilina Rathnayake1-14/+12
and minor polishing
2018-02-03highfive: Update to version 1.5 (#7041)Erik Schnetter1-0/+1
2018-02-03A new package: libcroco. (#7154)健美猫1-0/+37
2018-02-03macOS Fix for GDAL (#7155)Elizabeth Fischer1-6/+11
2018-02-03clingo@5.2.2: new package (#7091)Geoffrey Oxberry1-0/+54
2018-02-03stringtie: add version 1.3.4a (#7164)Eric1-0/+1
2018-02-02new package: perl-exporter-tiny (#7030)Eric1-0/+35
2018-02-01Efficient array of booleans, C extension (#7135)Feiyi Wang1-0/+37
2018-01-31lz4 platform=darwin: fix dylib name (#7112)Geoffrey Oxberry1-0/+6
2018-01-31libdwarf: fix linking, fix build on Darwin (#7124)Geoffrey Oxberry1-3/+31
* libdwarf: fix linker flags * libdwarf: fix header install names * libdwarf: add zlib dependency Prior to this commit, libdwarf was linked to the system zlib. This commit links it to spack-installed zlib. * libdwarf: fix dynamic library suffix for Darwin
2018-01-31symlink python3 to python (#7103)healther1-0/+6
* symlink python3 to python * otherwise not all autotools are smart enough * Update package.py
2018-01-31Added osu-micro-benchmarks@5.4 (#7149)sknigh1-0/+1
2018-01-31Adding support for the Accelerate library on OS X (#7068)Brian Van Essen1-2/+7
* Adding support for the Accelerate library on OS X * Fixed guard on variable and added another depends_on statement to make sure that openblas gets selected even when openmp_blas variant is not turned on.
2018-01-31fr-hit: Create new package (#7132)Eric2-0/+72
2018-01-31Protobuf fix (#7110)Brian Van Essen1-0/+8
* Fixed a bug where when using shared libraries OS X does not set the RPATH correctly
2018-01-31LBANN OS X (#7105)Brian Van Essen3-1/+34
* Added a package for the MDAnalysis toolkit. * Added some flags to fix the build RPATHs and OpenMP for LBANN on OS X. * Fixed Hydrogen branch of Elemental to find OpenMP on OS X.
2018-01-31py-setuptools-git: Create new package (#7131)Eric1-0/+37
2018-01-31PNGwriter: 0.7.0 (#7026)Axel Huebl1-0/+10
Adds the latest release of PNGwriter, including Windows and CMake config package support.
2018-01-31Added v1.4.2 to libfabric package (#7053)sknigh1-0/+1
2018-01-31abyss: added missing libtool dependency (#7054)Levi Baber1-0/+1
2018-01-31openPMD-validator (#7064)Axel Huebl1-0/+42
Adds the new package for openPMD validator tools.
2018-01-31ocaml@4.06.0: new version (#7078)Geoffrey Oxberry1-1/+6
2018-01-31re2c@1.0.3: new package (#7092)Geoffrey Oxberry1-0/+39
2018-01-31opam: new package (#7079)Geoffrey Oxberry1-0/+53
2018-01-31bmake@20171207: new package (#7099)Geoffrey Oxberry1-0/+51
2018-01-31gcc: add version 7.3.0 (#7097)Geoffrey Oxberry1-0/+1
2018-01-31lz4@1.8.1.2: new version (#7111)Geoffrey Oxberry1-0/+1
2018-01-31libarchive@3.3.2: new version (#7113)Geoffrey Oxberry1-0/+1
2018-01-31rtags: add 2.17 and for now comment-out 2.12 (#7126)Denis Davydov1-2/+3
2018-01-31maq: Create new package. (#7133)lingnanyuan1-0/+39
2018-01-29rna-seqc package: JAVA_{ARGS,OPTS} for helper script (#6972)Eric1-1/+1
2018-01-28libtool, binutils: fix darwin linking (#7073)Geoffrey Oxberry2-7/+12
* libtool: fix linking of libtool on darwin * binutils, libtool: fix conflicts w/ BSD tools, v2 Fix namespace conflicts with BSD tools in a more elegant fashion, using a program prefix, similar to Homebrew.
2018-01-26Tell R's configure about tcltk config (#7085)George Hartzell1-1/+6
* Tell R's configure about tcltk config Add configure arguments that specify the location of the tcl and tk config scripts. Fixes #7072 * Flake8 cleanup
2018-01-26new package: essl (#6335)Brian Van Essen2-2/+106
Added support for the IBM ESSL math library.Updated Elemental to be able to build with ESSL.
2018-01-26Bzip2 now uses 'spack_cc' as a compiler, instead of plain 'cc' (#7074)Massimiliano Culpo1-2/+4
Looking at build logs, it seems that prior to this commit bzip2 was using 'cc', and relying on the PATH to be set correctly to find Spack wrappers. This commit improves the robustness of the recipe, by using the absolute path of the wrapper.
2018-01-25Protobuf package: allow building shared library (#7067)Brian Van Essen1-0/+4
This adds a +shared variant for building shared libraries in the protobuf package and enables it by default.
2018-01-25Lbann package: bug fix (#7066)Brian Van Essen1-2/+2
Fixed a bug in the guard on cub functionality. Reduced the requirements on hwloc to make it simpler to build on Power systems.
2018-01-24libtool: symlink libtool{ize} to glibtool{ize} (#7060)Geoffrey Oxberry1-3/+19
On Darwin and other BSD systems, the system 'libtool' and 'libtoolize' are BSD libtool and libtoolize, respectively. Some build systems require the GNU versions of these commands, so BSD package systems tend to name the GNU versions 'glibtool' and 'glibtoolize', respectively, to avoid namespace collisions. A problem with the current libtool package is that it installs the GNU libtool commands as 'libtool' and 'libtoolize', respectively, but build systems on BSD platforms will attempt to run 'glibtool' and 'glibtoolize'. The expedient solution to this problem is to symlink 'libtool' to 'glibtool' and 'libtoolize' to 'glibtoolize', because attempting to patch the detection logic one build system at a time seems impractical.
2018-01-24netlib-xblas 1.0.248: new package (#7024)Geoffrey Oxberry2-0/+100
* netlib-xblas@1.0.248: new package * netlib-lapack: add xblas option
2018-01-23Lbann update (#6987)Brian Van Essen2-18/+57
* Added new link line flag * Refactored some of the common components out of the different version's build commands. Also corrected the when commands to properly capture non-numeric names such as local. * Added support to the Elemental package for the Hydrogen branch.
2018-01-23Fix gtkplus build by hardcoding X11 support (#6971)Federico Ficarelli7-16/+14
* Fix gtkplus build by hardcoding X11 support * Remove +X variant from gtkplus dependents
2018-01-23Fix +readline handling (#7048)Federico Ficarelli1-4/+2
2018-01-23argp-standalone@1.3: new package (#7014)Geoffrey Oxberry2-0/+61
Adds a package for the standalone version of the argp argument parsing interface from glibc for unix-style command options.
2018-01-23new package: gslib (#6328)Thilina Rathnayake1-0/+90
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