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2019-12-02Speedup environment activation (#13557)Massimiliano Culpo1-2/+8
* Add a transaction around repeated calls to `spec.prefix` in the activation process * cache the computation of home in the python package to speed up setting deps * ensure that module-scope variables are only set *once* per module
2019-11-15hwloc: added 'master' version pointing at the HEAD of the master branch (#13734)Massimiliano Culpo1-4/+6
2019-11-04binary distribution: relocate text files properly in relative binaries (#13578)Greg Becker1-7/+25
* Make relative binaries relocate text files properly * rb strings aren't valid in python 2 * move perl to new interface for setup_environment family methods
2019-10-31elpa: prefer 2016.05.004 until sse/avx/avx2 issues are resolved (#13530)eugeneswalker1-1/+1
- configuration fails on newer versions when enabling sse/avx/avx2 - prefer an older version that will build with these features
2019-10-31trilinos: temporarily constrain netcdf@:4.7.1 (#13526)eugeneswalker1-1/+1
remove this when issues are resolved with `trilinos^netcdf@4.7.2`
2019-10-25Add py-twine package (#13449)Adam J. Stewart1-0/+22
2019-10-25Add py-pkginfo package (#13448)Adam J. Stewart1-0/+19
2019-10-25Add latest version of py-tqdm (#13446)Adam J. Stewart1-2/+7
2019-10-25Add latest version of py-requests-toolbelt (#13445)Adam J. Stewart1-2/+3
2019-10-25Add latest version of py-readme-renderer (#13444)Adam J. Stewart1-3/+5
2019-10-25New package: gpu-burn (#13108)Glenn Johnson2-0/+73
2019-10-25py-nbformat package: add version 4.4.0 (#13421)Andreas Baumbach1-0/+1
2019-10-25New package: py-defusedxml (#13419)Andreas Baumbach1-0/+17
2019-10-25New package: OSQP (#13432)Sinan1-0/+22
2019-10-25LIBXSMM package: add version 1.14 (#13436)Hans Pabst1-1/+2
2019-10-25lmdb package: add version 0.9.24 (#13437)Michael Kuhn1-0/+1
2019-10-25sqlite package: add version 3.30.1 (#13438)Michael Kuhn1-0/+1
2019-10-25py-gensim: new package at 3.8.0 (#13136)Justin S1-0/+28
* py-gensim: new package at 3.8.0 * py-gensim: add 3.8.1
2019-10-24Views: fix python in views when python prefix is under a symlink (#12575)Greg Becker1-1/+12
* Fix python in views when python prefix is under a symlink * Add todo for future generalization
2019-10-24Add latest version of NetCDF libraries (#13416)Adam J. Stewart3-5/+9
2019-10-24Extend HPX package (#13219)Mikael Simberg1-6/+24
* Add master branch as version to HPX package * Remove C++98 option from HPX package * Add option to turn off examples in HPX package * Add MPI variant to HPX package
2019-10-24New package: py-cdsapi (#13363)Jannek Squar1-0/+19
* New package py-cdsapi to access Climate Data Store for downloading climate and weather reanalysis data * Improvements
2019-10-24mfem: add version 4.0 (without cuda) (#11880)Geoffrey Oxberry2-7/+84
* mfem: add version 4.0.0 (without cuda, raja, etc) * mfem@4.0.0: add occa variant * mfem@4.0.0: add raja variant * Update package.py * Update package.py * Update package.py * Update package.py * Update package.py
2019-10-23blast-legacy: fix build issues (#13370)Eric Martin1-1/+2
2019-10-23subread: add version 2.0.0 (#13368)Eric Martin1-0/+1
2019-10-23sundials: add version 5.0.0 and new variant (#13375)Cody Balos1-66/+106
* sundials: add version 5.0.0 and new variant plus some cleanup * sundiaks: fix formatting * sundials: fix dependencies
2019-10-23vt: add version 0.5772 (#13367)Eric Martin1-0/+1
2019-10-23bison: Fix parallel build (#13402)Michael Kuhn2-4/+88
2019-10-23mysql: Use correct python command (#13393)Michael Kuhn1-9/+10
* mysql: Use correct python command python~pythoncmd does not provide a python symlink for python3, so make sure we pick the right command. * mysql: Adapt to build env changes
2019-10-23hypre: Add new variants to expose existing features. (#13373)Sarah Osborn1-5/+36
* hypre: Add new variants to expost existing features. * hypre: Add new variants to expose existing features. * hypre: Shorten description line. * hypre: Add an explicit else clause to disable some features.
2019-10-23Add latest version of py-pbr (#13380)Adam J. Stewart1-7/+23
2019-10-23py-argparse: remove Python dependency version (#13378)Adam J. Stewart1-2/+0
2019-10-23py-traceback2: fix dependencies (#13381)Adam J. Stewart1-2/+7
2019-10-23bison: Fix build (#13231)Michael Kuhn1-0/+4
It seems that 3.4.2 includes a change that is supposed to fix parallel builds (https://lists.gnu.org/archive/html/bug-bison/2019-08/msg00000.html). Instead, it actually breaks it for me (with -j48) with errors such as: ``` mv: cannot stat 'examples/c/reccalc/scan.stamp.tmp': No such file or directory Makefile:9323: recipe for target 'examples/c/reccalc/scan.stamp' failed ```
2019-10-23py-linecache2: pbr is only a build dependency (#13379)Adam J. Stewart1-1/+3
2019-10-23py-unittest2: fix dependencies (#13382)Adam J. Stewart1-2/+1
2019-10-23Add py-codecov package (#13383)Adam J. Stewart1-0/+24
2019-10-23bpp-phyl: Clarify namespace of 'isnan' function. (#13386)t-karatsu2-0/+79
2019-10-23magics: Use correct python path (#13394)Michael Kuhn1-1/+6
python~pythoncmd does not provide a python symlink for python3, so make sure we pick the right command.
2019-10-23bracken: Use correct python command (#13395)Michael Kuhn1-4/+7
python~pythoncmd does not provide a python symlink for python3, so make sure we pick the right command.
2019-10-23Ace package. Initial commit (#13211)carlabguillen1-0/+44
* Ace package. Initial commit * Correcting header now with licence. * Using sha256 * Making requested changes:removing import line, urls and checksums in one line, and making it an MakefilePackage. * Removing extra line
2019-10-23glib: Use correct python command (#13392)Michael Kuhn1-3/+6
python~pythoncmd does not provide a python symlink for python3, so make sure we pick the right command.
2019-10-23petsc: add version 3.12.1 [and variant: batch] (#13390)Satish Balay1-8/+14
* petsc: add version 3.12.1 [and variant: batch] * fix test_prs_update_old_api errors
2019-10-22gmsh: add version 4.4.1 (#13366)Benjamin Fovet1-0/+1
2019-10-22Boost package: Fix iostream autodetect libraries (#12440)Frédéric Simonis1-1/+3
Boost iostream autodetects the compression libraries libzstd and liblzma outside of the Spack environment. This commit disables mentioned libraries. In the future if the Spack zstd/lzma packages were added as dependencies of the Spack Boost package, additional work could be done to build Boost with the Spack-built versions of these libraries.
2019-10-22ADIOS2: Document endian_reverse variant (#13226)Axel Huebl1-1/+2
Update the documentation of the `endian_reverse` variant in ADIOS2. The short description caused some confusion (for me) :-)
2019-10-22git-lfs: Add new version (#13356)Ruben Di Battista1-0/+1
PS: The old versions do not work: it's likely that they changed git history on submodules
2019-10-22Default to Python 3.7 (#10319)Adam J. Stewart2-7/+44
* Default to Python 3 * Fix build with Intel compilers
2019-10-22Add latest version of py-scikit-learn (#13295)Adam J. Stewart1-32/+19
* Add latest version of py-scikit-learn * setup_environment -> setup_build_environment
2019-10-22Add latest version of npth (#13353)Adam J. Stewart1-1/+2
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