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2021-11-19portage, tangram, wonton: update dependencies (#26886)Tracy-Pantleo3-29/+39
* tangram/wonton spack * portage spack update * wonton spack updated * tangram spack updated * white space removed * Update package.py * Update package.py * Update package.py * Update package.py portage spack upstream * Update package.py for loop test * Update package.py style errors * Update package.py * tangram * Update package.py * Update package.py * Update package.py * Update package.py * Update package.py edits * Update package.py * Update package.py remove @master * Update package.py remove @master * Update var/spack/repos/builtin/packages/portage/package.py Co-authored-by: Seth R. Johnson <johnsonsr@ornl.gov> * Update var/spack/repos/builtin/packages/wonton/package.py Co-authored-by: Seth R. Johnson <johnsonsr@ornl.gov> * Update package.py * Update package.py * Update package.py * Update package.py Co-authored-by: Tracy Nicole Pantleo <tpantleo@varan.lanl.gov> Co-authored-by: Tracy Nicole Pantleo - 361537 <tpantleo@darwin-fe1.lanl.gov> Co-authored-by: Seth R. Johnson <johnsonsr@ornl.gov>
2021-11-19New version: py-pyzmq 22.3.0 (#27543)iarspider1-9/+15
* New version: py-pyzmq 22.3.0 * Update var/spack/repos/builtin/packages/py-pyzmq/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-11-19py-progressbar2: add v3.55.0 (#27558)Adam J. Stewart1-0/+1
2021-11-19py-ruamel-yaml-clib: link to python (#27557)Adam J. Stewart1-1/+1
2021-11-19py-jinja2: add 3.0.3 (#27560)Manuela Kuhn1-1/+2
2021-11-19libfabric: Add v1.14.0 release (#27562)Raghu Raja1-0/+1
Signed-off-by: Raghu Raja <raghu@enfabrica.net>
2021-11-19[py-pickle5] New package (#27533)Jen Herting1-0/+20
Co-authored-by: Sid Pendelberry <sid@rit.edu>
2021-11-19py-werkzeug: add 2.0.2 (#27555)Manuela Kuhn1-0/+3
2021-11-19py-cycler: add 0.11.0 and get sources from pypi (#27550)Manuela Kuhn1-3/+5
* py-cycler: add 0.11.0 * Update var/spack/repos/builtin/packages/py-cycler/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-11-19py-debugpy: add 1.5.1 (#27551)Manuela Kuhn1-0/+1
2021-11-19New version: py-pyaml 6.0 (#27542)iarspider1-7/+12
2021-11-19New version: py-qtconsole 5.2.0 (#27554)iarspider1-1/+5
* New version: py-qtconsole 5.2.0 * Apply suggestions from code review Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-11-19New package: py-lws (#27536)Jen Herting1-0/+25
* [py-lws] added package * added cython support * updates for upstream * updated py-lws with cython only option * changes to py-lws for flake8 * [py-lws] - update copyright - url -> pypi Co-authored-by: Sid Pendelberry <sid@rit.edu>
2021-11-19py-filelock: add 3.4.0 (#27553)Manuela Kuhn1-2/+7
2021-11-19New version: openldap 2.6.0; (#27520)iarspider4-3/+8
* New version: openldap 2.6.0; fix recipe for groff (requires pkg-config to find uchardet); fix recipe for openldap (requires groff to build documentation) * Restrict openldap versions of py-python-ldap and percona-server * Update var/spack/repos/builtin/packages/groff/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-11-19New versopn: py-python-daemon 2.3.0 (#27519)iarspider1-1/+5
* New versopn: py-python-daemon 2.3.0 * Update package.py
2021-11-19New version: py-pythran 0.10.0 (#27528)iarspider1-1/+2
* New version: py-pythran 0.10.0 * Update package.py
2021-11-19py-babel: add 2.9.1 (#27544)Manuela Kuhn1-0/+1
2021-11-19py-coverage: add 6.1.2 (#27545)Manuela Kuhn1-3/+6
2021-11-19Spack requires Python 2.7: from 0.18.0: (#27505)Harmen Stoppels1-1/+2
* Spack requires Python 2.7: from 0.18.0: * Better bounds
2021-11-19py-cryptography: add 3.4.8 and 35.0.0 (#27548)Manuela Kuhn1-3/+4
2021-11-19py-click: add 8.0.3 (#27549)Manuela Kuhn1-0/+1
2021-11-19define_from_variant: return an empty string for non-existing variants (#27503)Harmen Stoppels1-0/+9
This permits to use conditional variants without a lot of boilerplate.
2021-11-19New version: py-pytools 2021.2.9 (#27531)iarspider1-2/+5
2021-11-19otf: specify zlib prefix explicitly (#27491)Michael Kuhn1-2/+6
This causes `otfconfig` to also list zlib's library directory. Otherwise, `-lz` cannot be found. Also remove `--with-zlibsymbols`, which doesn't seem to be supported anymore.
2021-11-19nextflow: add v21.10.1 (#27538)Diego Alvarez1-0/+1
2021-11-19VisIt: update for building with 3.2.1. (#27036)Eric Brugger4-15/+84
Include several several patches to vtk 8.1 for building on a system with no system install X11 libraries or include files. Specify specific versions of dependent packages that are known to work with 3.2.1. Tested on spock.olcf.ornl.gov. The GUI came up and rendered images and an image was successfully saved using off screen rendering from data from curv2d.silo.
2021-11-19thepeg: fix version condition bug (#27501)haralmha1-1/+1
2021-11-18py-rapidjson: add version 1.5 (#27527)iarspider1-0/+2
2021-11-18py-ply: get sources from pypi (#27526)Manuela Kuhn1-2/+5
* py-ply: use pypi * Add py-setuptools dependency
2021-11-18Fix cyrus-sasl recipe: requires groff to build documentation (#27522)iarspider1-0/+1
2021-11-18Add Clingo v5.5.1 (#27512)Alec Scott1-0/+1
2021-11-17new package: py-scikit-learn-extra (#27439)Glenn Johnson1-0/+27
* new package: py-scikit-learn-extra * Remove extra blank line * Add missing py-cython dependency
2021-11-17py-envisage: add 6.0.1 (#27517)Manuela Kuhn1-3/+6
2021-11-17py-pygraphviz: Add version 1.7 (#26712)haralmha1-0/+21
* Add version 1.7 * Fixup! Add version 1.7
2021-11-17llvm: introduce [build/link]_llvm_dylib (#27450)Harmen Stoppels1-5/+14
Apart from building a single dylib for LLVM, users should also be able to link tools against it.
2021-11-17Add Htslib v1.14, Samtools v1.14, and Bcftools v1.14 (#27515)Alec Scott3-0/+7
2021-11-17openPMD-validator: 1.1.0.2 (#27514)Axel Huebl1-1/+5
Add the latest versions.
2021-11-17Add LMOD v8.5.27 (#27513)Alec Scott1-0/+1
2021-11-17Updated Repository Information (#27496)Ben Bergen1-2/+2
2021-11-17New patch release SLEPc 3.16.1 (#27509)Jose E. Roman2-2/+4
2021-11-17py-ipykernel: add 5.5.6 (#27498)Manuela Kuhn1-0/+1
2021-11-17llvm: use LIBCXX_ENABLE_STATIC_ABI_LIBRARY=ON (#27448)Harmen Stoppels1-16/+6
The previous workaround of using CMAKE_INSTALL_RPATH=ON was used to avoid CMake trying to write an RPATH into the linker script libcxx.so, which is nonsensical. See commit f86ed1e. However, CMAKE_INSTALL_RPATH=ON seems to disable the build RPATH, which breaks LLVM during the build when it has to locate its build-time shared libraries (e.g. libLLVM.so). That required yet another workaround, where some shared libraries were installed "by hand", so that they were picked up from the install libdir. See commit 8a81229. This was a dirty workaround, and also makes it impossible to use ninja, since we explicitly invoked make. This commit removes the two old workaround, and sets LIBCXX_ENABLE_STATIC_ABI_LIBRARY=ON, so that libc++abi.a is linked into libc++.so, which makes it enough to link with -lc++ or invoke clang++ with -stdlib=libc++, so that our install succeeds and linking LLVM's c++ standard lib is still easy.
2021-11-17openblas: add a symbol suffix variant (#27500)Harmen Stoppels1-0/+18
Some packages use a 64_ or _64 symbol suffix for the ilp64 (= 64-bit integers) intefrace for BLAS. In particular if we want to support shim libraries like libopenblastrampoline supporting both the 32 and 64 bit integer version of blas, it must be possible to distinguish between the two.
2021-11-17qt+webkit: Build needs Py2, but mesa/Meson needs Py3 (#27466)Bernhard Kaindl1-2/+17
mesa inherits MesonPackage (since October 2020) which depends on Py@3. The conflicts('mesa') enables a regular build of `qt@5.7:5.15+webkit` without having to specify the exact version by causing the concretizer to select mesa18 which does not depend on python@3. Co-authored-by: Bernhard Kaindl <bernhard.kaindl@ait.ac.at>
2021-11-17New version of Spack and new conflicts (#27384)Harmen Stoppels1-5/+10
2021-11-17Add ReFrame 3.9.1 (#27493)Vasileios Karakasis1-0/+1
2021-11-16New version: py-pytest-cov 3.0.0; add 'toml' variant to py-coverage (#27478)iarspider2-0/+7
* New version: py-pytest-cov 3.0.0; add 'toml' variant to py-coverage * Update package.py
2021-11-16New version: py-pylint 2.8.2; new package py-platformdirs (#27473)iarspider2-1/+30
* New version: py-pylint 2.8.2; new package py-platformdirs * Update var/spack/repos/builtin/packages/py-platformdirs/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-pylint/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-11-16llvm: maintainers (#27482)Harmen Stoppels1-1/+1
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