Age | Commit message (Collapse) | Author | Files | Lines | |
---|---|---|---|---|---|
2016-08-16 | ape: add new package | Denis Davydov | 1 | -0/+55 | |
2016-08-16 | octopus: new package | Denis Davydov | 1 | -0/+86 | |
2016-08-15 | temp commit in current state | Andrew Williams | 2 | -3/+10 | |
2016-08-15 | opencv: make py-numpy a nolink dependency | Ben Boeckel | 1 | -1/+1 | |
2016-08-15 | go: mark git as also being a runtime dependency | Ben Boeckel | 1 | -1/+1 | |
2016-08-15 | packages: mark builddeps as type='build' | Ben Boeckel | 5 | -7/+7 | |
Less sure about these. | |||||
2016-08-15 | r-datatable: fix nolink dependency | Ben Boeckel | 1 | -1/+1 | |
2016-08-15 | packages: mark builddeps as type='build' | Ben Boeckel | 6 | -6/+6 | |
2016-08-15 | Basic package file for plumed and boilerplate for external intel mpi | Andrew Williams | 2 | -76/+41 | |
2016-08-12 | Merge pull request #1342 from adamjstewart/features/cgns | Todd Gamblin | 1 | -0/+73 | |
Add CGNS package | |||||
2016-08-11 | Merge pull request #1491 from eschnett/eschnett/curl | Todd Gamblin | 1 | -0/+1 | |
Update curl to 7.50.1 | |||||
2016-08-10 | Remove unneeded noqa comments. | Todd Gamblin | 20 | -60/+109 | |
2016-08-10 | Spack packages now PEP8 compliant. | Todd Gamblin | 381 | -1644/+2484 | |
2016-08-10 | Update curl to 7.50.1 | Erik Schnetter | 1 | -0/+1 | |
2016-08-09 | Openssl package should not require openssl (https) to obtain source. | Matt Belhorn | 1 | -1/+1 | |
2016-08-09 | qa : flake8 issues | alalazo | 1 | -12/+13 | |
2016-08-09 | plumed : fixed name clash on attribute | alalazo | 1 | -2/+2 | |
2016-08-09 | plumed : adding dependents | Massimiliano Culpo | 3 | -18/+71 | |
* cp2k : added plumed * gromacs : patched pme load balancing * gromacs : added plumed | |||||
2016-08-08 | Merge pull request #1345 from hartzell/feature/add-perl-dependency-to-git | becker33 | 1 | -6/+6 | |
Add depends_on('perl'), depends_on('pcre') to git package | |||||
2016-08-07 | Merge pull request #1449 from hartzell/feature/add-package-for-prank | Todd Gamblin | 7 | -0/+304 | |
Add package for prank and supporting tools | |||||
2016-08-07 | Merge pull request #1463 from davydden/pkg/opium | Todd Gamblin | 1 | -0/+55 | |
opium: add new package | |||||
2016-08-07 | Merge pull request #1464 from hartzell/feature/update-lmod | Todd Gamblin | 1 | -3/+5 | |
No need to patch Lmod after 6.4.4 | |||||
2016-08-07 | Merge pull request #1465 from glennpj/pango_url | Todd Gamblin | 1 | -0/+2 | |
Add list_url to pango package | |||||
2016-08-07 | Merge pull request #1466 from pramodk/develop | Todd Gamblin | 1 | -3/+5 | |
PDT should download full installer package | |||||
2016-08-07 | tar: fix 1.28 on macOS; add 1.29 (#1462) | Denis Davydov | 2 | -2/+494 | |
2016-08-07 | Fix erroneously stripped trailing whitespace in patch (#1467) | Adam J. Stewart | 1 | -4/+5 | |
2016-08-07 | PDT should download full installer package pdtoolkit-X.tar.gz (default ↵ | Pramod Kumbhar | 1 | -3/+5 | |
pdt-X.tar.gz is only for x86 and cray) | |||||
2016-08-06 | Add list_url to pango package | Glenn Johnson | 1 | -0/+2 | |
Added a `list_url` so the updated pango tar file can be retrieved. | |||||
2016-08-06 | No need to patch Lmod after 6.4.4 | George Hartzell | 1 | -3/+5 | |
The Lmod author changed the src so that it uses the tclsh (and shared libraries) discovered at configure time. He did it differently that I did in this patch, but he changes solve our problem too, so... | |||||
2016-08-06 | Make configure use our gettext library | George Hartzell | 1 | -0/+1 | |
The configure script needs extra encouragement to link against our gettext/libintl library. | |||||
2016-08-06 | Clean up rebase problems | George Hartzell | 1 | -1/+1 | |
My rebase duplicated the depends_on('zlib') and dropped the --with-curl from the configure. This fixes those. | |||||
2016-08-06 | [Whitespace] Gather the depends_on's together. | George Hartzell | 1 | -0/+1 | |
2016-08-06 | Call configure `--with-libpcre=...` to use our pcre | George Hartzell | 1 | -1/+1 | |
An earlier commit claimed that this package depends_on('pcre') but I didn't fix the call to configure that enabled it. This fixes that. | |||||
2016-08-06 | Enable depends_on('pcre') also | George Hartzell | 1 | -3/+1 | |
While I have the patient on the operating table, @adamjstewart asked me to uncomment and test the depends_on('pcre'). Did it and it Works For Me(tm). | |||||
2016-08-06 | Add depends_on('perl') to git package | George Hartzell | 1 | -3/+3 | |
This commit changes the git package to depend_on('perl'). The system perl is not always sufficient to install git (e.g. a CentOS7 system with the development tools group installed has perl but not the ExtUtils::MakeMaker package that git needs) and one can't always update the system's perl. This PR depends_on PR #1339, which adds a perl package to spack. | |||||
2016-08-06 | Switch to using *std_cmake_args | George Hartzell | 4 | -7/+4 | |
2016-08-06 | Flake8 whitespace cleanup | George Hartzell | 4 | -4/+8 | |
2016-08-06 | Add Bio++ tool suite and supporting libs | George Hartzell | 4 | -0/+173 | |
Add the Bio++ suite and its supporting libraries. | |||||
2016-08-06 | Add package for mafft | George Hartzell | 1 | -0/+42 | |
2016-08-06 | Add package for exonerate | George Hartzell | 1 | -0/+44 | |
2016-08-06 | Fix name of bpp-suite (missing -...) | George Hartzell | 1 | -1/+1 | |
2016-08-06 | Add package for prank | George Hartzell | 1 | -0/+44 | |
2016-08-06 | opium: add new package | Denis Davydov | 1 | -0/+55 | |
2016-08-05 | Merge pull request #1451 from hartzell/feature/add-package-for-fastx_toolkit | becker33 | 2 | -0/+83 | |
Add package for fastx toolkit | |||||
2016-08-05 | Merge pull request #1452 from hartzell/feature/add-package-for-samtools | becker33 | 4 | -29/+101 | |
Add package for samtools | |||||
2016-08-05 | Remove lingering FIXME commentary | George Hartzell | 1 | -3/+0 | |
2016-08-05 | Samtools depends on htslib from 1.3.1 onward | George Hartzell | 1 | -2/+2 | |
Samtools used to (before 1.3.1) include it's own copy of htslib. Going forward, it needs to use the standalone htslib. | |||||
2016-08-05 | Merge pull request #1453 from hartzell/feature/add-package-for-seqtk | becker33 | 1 | -0/+43 | |
Add package for seqtk | |||||
2016-08-05 | Merge pull request #1450 from hartzell/feature/add-package-for-bwa | becker33 | 1 | -0/+52 | |
Add package for bwa | |||||
2016-08-05 | Merge pull request #1442 from suraia/update-scorep-2.0 | becker33 | 3 | -21/+39 | |
Update Score-P to 2.0 Most likely this can be generalized to link against older versions of dependencies, but it looks good for now. |