Age | Commit message (Collapse) | Author | Files | Lines |
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That patch is only a partial solution and does not solve the
issue. Revert is, unnecessary.
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MPILander - There can only be one (MPI process)!
The final MPI implementation.
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This also adds an older 1.x version to gdal that is required by gplates.
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* blasr-libcpp: new package
* blasr-libcpp: added version #, and moved make into build phase.
* blasr-libcpp: added prefix.include to PBBAM_INC, added version URL
* blasr-libcpp: indented comments, made list of configure_args, and added prefix.include
* blasr-libcpp: added setup_dependent_environment from blasr
* blasr-libcpp: fixed syntax for configure_args
* blasr-libcpp: fixed configure_args syntax
* blasr-libcpp: fixed syntax
* blasr-libcpp: syntaxtest
* blasr-libcpp: fixed def build error
* blasr-libcpp: edited dependent environment to move after install phase
* blasr-libcpp: rearranged build and install
* blasr-libcpp: added configure_args
* blasr-libcpp: fixed syntax error
* blasr-libcpp: removed .spec from INC and LIB alignment, pbdata, hdf
* blasr-libcpp: seperated configure args
* blasr-libcpp: edited configure and setup_dependent steps
* blasr-libcpp: added CPATH arg
* blasr-libcpp: C_INCLUDE_PATH
* blasr-libcpp: fixed install issues resulting from PacBio change
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[they are not tags] (#8448)
Fixes the following problem:
==> Installing trilinos
==> Warning: Suspicious requests to set or unset 'LD_LIBRARY_PATH' found
==> Warning: env.unset('LD_LIBRARY_PATH') at /home/balay/spack.new/lib/spack/spack/build_environment.py:269
==> Warning: ---> env.set('%s' % key, value) at /home/balay/spack.new/lib/spack/spack/build_environment.py:292
==> Trying to clone git repository: https://github.com/trilinos/Trilinos.git at tag develop
Fetching tags only, you probably meant:
git fetch --tags
error: pathspec 'develop' did not match any file(s) known to git.
==> Fetching from [git] https://github.com/trilinos/Trilinos.git failed.
==> Error: FetchError: All fetchers failed for trilinos-develop-tgkpnctp6nn4imoizxlw4ymqyztcie4n
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* [glvis] Add new version, 3.4; update all checksums to be SHA-256.
* [GLVis] Use the new bit.ly short link for v3.4.
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Latest superlu_dist sources now use INCLUDEDIR.
This change should not affect older superlu_dist version builds
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The patch to select ELPA API needs to be applied to
version 6.2.0 too.
The link line of hdf5 is computed incorrectly from
the configuration part of the build-system. To fix
this the relevant file (make.inc) is patched.
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* Add new package: unuran
* Remove list_url and prng variant due to compilation problems
* Make shared library option more explicit
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* A new package: axel.
* Remove duplicate pkgconf.
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* py-pybind11: Additionally install python extensions e.g. run python setup
* py-projectq: Added new package for quantum computing
* py-projectq: corrected typos
* edited flake8 incompatibilities
* additional flake8 faults
* changes according to suggestions
* flake8 errors fixed
* typo and missing environment variable set
* py-pybind11:added setup_environemt
* py-projectq:changed version according to request
* flake8 correction
* py-pybind11:changed to setup_py and removed noop
* py-projectq:removed dependency and changed type of py-pytest dependency
* py-pybind11: flake8 error corrected
* py-projectq: Small error correction
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* Git's gitk needs TK's wish to be found in PATH
* Add a _runtime_ dependency on `tk`
* Add an environment rule to add the path to TK's `wish` program to $PATH for
the generated `git` modulefile.
* Make TclTk run environment an optional variant for git.
* Cleanup based on PR recommendations.
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The following improvements are made to cxx standard support
(e.g. compiler.cxxNN_flag functions) in compilers:
* Add cxx98_flag property
* Add support for throwing an exception when a flag is not supported (previously
if a flag was not supported the application was terminated with tty.die)
* The name of the flag associated with e.g. c++14 standard support changes for
different compiler versions (e.g. c++1y vs c++14). This makes a few corrections
on what flag to return for which version.
* Added tests to confirm that versions report expected flags for various c++
standards (or raise an exception for versions that don't provide a given cxx
standard)
Note that if a given cxx standard is the default, the associated flag property will
return ""; cxx98 is assumed to be the default standard so this is the behavior for
the associated property in the base compiler class.
Package changes:
* Improvements to the boost spec to take advantage of the improved standard
flag facility.
* Update the clingo spec to catch the new exception rather than look for an
empty flag to indicate non-support (which is not part of the compiler flag API)
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* r-mice: new package
* flake8 fixed
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The tcl package references the original sources upon install, and the tk build
requires the tcl sources. This updates the tcl package to install its sources following
the example of #4102, and also updates the tclConfig.sh file to properly reference
the installed sources (rather than the staging directory created by Spack).
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* new version scotch@6.0.5a
* patch metis headers on scotch@6.0.4 according to https://gforge.inria.fr/tracker/?func=detail&atid=1082&aid=19521&group_id=248
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* GDL and missing dependencies
Signed-off-by: Ricardo Silva <ricardo.silva@epfl.ch>
* GDL and GraphicsMagick improvements
* GDL: sort variants and dependencies, add descriptions
* GDL: add wx variant
* GDL: make variants explicit (in cmake args)
* GraphicsMagick: sort dependencies
* GraphicsMagick: cleanup boilerplate comments
Signed-off-by: Ricardo Silva <ricardo.silva@epfl.ch>
* Improvements/Fixes for gdl, plplot and graphicsmagick
* gdl:
* variants:
* openmp
* be explicit about enabling/disabling x11
* dependencies:
* logic for plplot with/without wx
* some previously missing (where being picked up from the system)
* graphicsmagick: previously missing dependencies (where being picked up from the system)
* plplot: more versions + variants + dependencies
Signed-off-by: Ricardo Silva <ricardo.silva@epfl.ch>
* GDL: hdf4/5 variants
* also sorted explicit enabling/disabling of cmake flags for readability
Signed-off-by: Ricardo Silva <ricardo.silva@epfl.ch>
* plplot: fix variant descriptions
Signed-off-by: Ricardo Silva <ricardo.silva@epfl.ch>
* Add tcl variant, use find_libraries for portability
Signed-off-by: Ricardo Silva <ricardo.silva@epfl.ch>
* plplot: flake8
Signed-off-by: Ricardo Silva <ricardo.silva@epfl.ch>
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patching. (#7932)
* Update to 2018.3 and improve version URLs, dependencies and patching.
Improve to version -> URL translation to be algorithmic rather than manual.
Make binutils build dependency explicit where appropriate because we're sensitive to the assembler used.
Build's use of '-mrtm' is only patched away if it needs to be because the assembler is too old.
Incorporate @adamjstewart request to convert GCC version check to a conflict.
* Allow specification of C++ standard.
* Improve TBB patch per PR comments.
* Restrict RTM patch application to older OS only.
* New version 2018_U4.
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* pbbam: new package
* pbbam: updated version
* pbbam: added option tests handling
* pbbam: flake8 edits
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* Delete support for old versions of Elemental in Hydrogen
* Fix cmake_args versions in lbann
* Remove unused import (again)
* Revert elemental to pre-llnl fork
* Strip tailing whitespace from libgfortran.so
* Fix flake8
* Remove debug print
* * Add back elemental@develop
* Prohibit installation of hydrogen previous to 0.99
* Fix flake8
* Change cmake_args error to a conflicts for old versions of Hydrogen
* Use ~ not -
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* fermisciencetools: new package
* fermisciencetools: new package
* added comments about the error in building the source distribution; fixed flake8 errors
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* add sqlitebrowser
Change-Id: I20cac709509e82d348cebc11b0d584b53b2ad3d4
* add message and clean up unnecessary code
Change-Id: Ib9d2229ee25d751274680d06824891ee78fa5970
* and make flake8 happy
Change-Id: I814eb89eefe1767af4d8043b08b61991750516df
* make gcc-independence great again
Change-Id: I75f7271757782a6735eb7f03c0551d190722974d
* remove explicit import of dso_suffix
Change-Id: I626c6391b22524895199db5508606c4cf22bf9b5
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* fix qt@5.8: build on systems without wayland
Change-Id: I56b83208edd46f50e003d82c071e296e905bfb15
* add links
Change-Id: Ia16fc20632690340f33df77fbdcb1a166d49cedc
* move 5.8 comparison into 5.7 configure block
Change-Id: I7dc606beeb5b5bf4e8263bc50d28de6591633c99
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* add a shared variant for all supported versions
* address comment from @citibeth about MacOS lib installs
* address additional comments from @citibeth about MacOS lib installs
* set +shared variant to be default behavior
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* add commented test dependencies
Change-Id: I38ffd3caa77a59f2a0a7ae92a9c8e8215cf5b4d6
* readd make('test') to openssl
Change-Id: Ia3733a3848a2a26729b4050c7d4439ea9de17b1a
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* Add new package: ftgl
* Check version using decorator
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We need a newer version of HDF5 and dropped the boost dependency.
Modernize the test variant to the spack test functionality.
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* add package py-cartopy
Change-Id: Ifbe541e852921c384a381594a2c1110814556311
* fix comments and flake8
Change-Id: I8d5e994580e8252e00654e68ad79d74e06089939
* remove pip dependency... not sure why added in the first place
Change-Id: Ie2a788887dac30778cc43931a0732980a347514d
* move build, link, run to default dependencies
Change-Id: I1ec0cb7dc4a697c4ca9e68a0cc0d8694cc21c100
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* Add new package: davix
* Add list_url
* Remove extra spaces, add list_depth and specify dependency type
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Provides a patch for the fix in
https://github.com/ornladios/ADIOS/pull/182
Installed ADIOS MPI-enabled libraries are with that able to also
perform serial I/O without the need to start the whole app via
`mpiexec`.
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* Add new package: rngstreams
* Remove unnecessary list_url
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Add the new type 'test` to the `googletest` dependency
of xsimd.
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* Add new package: prng
* Add missing dependencies and use force_autoreconf option
* Add dependency types
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Fix the maximum accepted SZ version for the latest ADIOS release.
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the type 'test' exists now :-)
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Forgot to bump this package with the library release.
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