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2022-06-09clingo: fix ~python build (#30824)Adam J. Stewart1-10/+14
2022-06-08lua-mpack: build with -fPIC always (#31054)Asher Mancinelli1-1/+1
2022-06-08py-memray: add new package (#31033)Adam J. Stewart1-0/+27
* py-memray: add new package * Link to Python * Add missing non-Python deps
2022-06-08cuDNN: add v8.4.0.27-11.6 (#31034)Adam J. Stewart1-0/+6
2022-06-08hpctoolkit: adjust dependencies for develop (#31050)Mark W. Krentel1-4/+10
The develop branch now uses libiberty, but not binutils or libdwarf.
2022-06-08Draft: Pending #29806 [py-sentry-sdk] added version 1.5.5 (#29143)Jen Herting1-18/+43
* [py-sentry-sdk] audited dependencies and relisted extras as variants * [py-sentry-sdk] added version 1.5.5 * [py-sentry-sdk] flake8 * [py-sentry-sdk] - added "descriptions" to variants - removed conflicts - replaced with when statements in varients
2022-06-08New package: py-colossialai (#30807)Jen Herting1-0/+28
* colossalai is dependency for deepoffense * [py-colossalai] added homepage * [py-colossalai] added dependencies and removed older versions * [py-colossalai] updated pypi url to match listed version * [py-colossalai] spack -> spack.package Co-authored-by: Sid Pendelberry <sid@rit.edu>
2022-06-08py-ytopt: add v0.0.4 (#31029)Brice Videau1-1/+2
2022-06-08new package: py-pytest-asyncio (#31040)Ryan Marcellino1-0/+27
2022-06-08py-glmsingle: add new package (#31043)Manuela Kuhn1-0/+38
2022-06-08OpenCV: add v4.6.0 (#31022)Adam J. Stewart1-1/+8
2022-06-08py-pympler: add v1.0.1 (#31031)Adam J. Stewart1-2/+8
2022-06-08Python: add v3.10.5 (#31039)Adam J. Stewart1-0/+1
2022-06-08Nalu-Wind: allow for lowest order infinity version (#31036)psakievich1-1/+1
This will allow us to pin trilinos in our repo
2022-06-07libtiff: add v4.4.0 (#31008)Adam J. Stewart1-6/+8
2022-06-07openPMD-api: 0.14.5 (#31023)Axel Huebl1-0/+1
Add the latest release.
2022-06-07meson: add version 0.62.2 (#31005)Erik Schnetter1-0/+1
2022-06-07Update Spack Bioconductor packages to Bioconductor 3.15 (#30984)Glenn Johnson187-8/+256
2022-06-07Update prmon recipe, v3.0.2 (#30979)Graeme A Stewart1-3/+5
* Update prmon recipe, v3.0.2 Update recipe to v3.0.2, using external dependency option for the build (as these are satisfied so easily with Spack) * Remove "broken" 3.0.1 version This one could not build properly with Spack, due to missing submodule sources
2022-06-07Add New Package:PSCMC (#30944)Bitllion1-0/+42
* add some new version of abacus and fix bug on mkl * Add Package:PSCMC * update maintainer * rebase * update maintainers * Update var/spack/repos/builtin/packages/pscmc/package.py Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com> Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2022-06-07WarpX: 22.06 (#31012)Axel Huebl2-1/+9
* WarpX: 22.06 Update `warpx` & `py-warpx` to the latest release, `22.06`. * Patch: Fix 1D CUDA Builds
2022-06-07Fix py-deap py-setuptools dependency (#31014)Brice Videau1-1/+1
2022-06-07Add py-ytopt-autotune version v1.0.0 (#31015)Brice Videau1-0/+1
2022-06-07json-glib depends on gobject-introspection (#30963)Gregory Lee1-0/+1
2022-06-07fd: add new package (#31010)Asher Mancinelli1-0/+23
2022-06-07Visit: Allow building without rendering (#31006)kwryankrattiger1-1/+0
This is important for HPC systems.
2022-06-07gmsh: +petsc requires ~int64 variant (#30969)Carlos Bederián1-2/+4
2022-06-07Fix empty install prefix post-install sanity check (#30983)Jordan Galby1-0/+16
2022-06-07R ecosystem: cran updates (#31004)Glenn Johnson295-49/+608
2022-06-07AMReX: update the CMake requirements for v22.06+ (#31018)Axel Huebl1-0/+1
2022-06-07py-vermin: add latest version 1.4.0 (#31009)Morten Kristensen1-1/+2
2022-06-07libint: add Python as build dependency (#30870)Mosè Giordano1-0/+1
Installation process of libint runs a Python script: <https://github.com/evaleev/libint/blob/69cc7b9bc6f2498b74284d4954b0f335f1bd94df/export/cmake/CMakeLists.txt.export#L410>. If Python isn't explicitly listed as build dependency, system Python will be picked up, which can cause troubles.
2022-06-07git-annex: fix source urls (#30789)Manuela Kuhn1-4/+13
2022-06-07glib: add v2.72.2 (#31001)Michael Kuhn1-0/+1
2022-06-07Fix py-ray dependencies and build system (#31016)Brice Videau1-1/+20
* Fix py-ray dependencies and build system * Update var/spack/repos/builtin/packages/py-ray/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Added documentation for unusual dependencies. * Fixed npm preinstall script per @adamjstewart suggestion. Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-06-06Update decompression support on Windows (#25185)John W. Parent2-0/+110
Most package installations include compressed source files. This adds support for common archive types on Windows: * Add support for using system 7zip functionality to decompress .Z files when available (and on Windows, use 7zip for .xz archives) * Default to using built-in Python support for tar/bz2 decompression (note that Python tar documentation mentions preservation of file permissions) * Add tests for decompression support * Extract logic for handling exploding archives (i.e. compressed archives that expand to more than one base file) into an exploding_archive_catch context manager in the filesystem module
2022-06-06Package: Don't warn for missing source on bundle packages without code (#30913)Chuck Atkins2-2/+19
2022-06-06Update package rtags (#30890)miheer vaidya1-3/+5
* Update backage bear Newer versions of rtags aren't available via older url * Fix sha256 as download link has changed Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com> Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2022-06-06atompow: remove again misplaced duplicate package (#30992)Massimiliano Culpo1-41/+0
Regression re-introduced in #30404
2022-06-06New package: py-numpy-quaternion (#29452)Jen Herting1-0/+32
* first build of numpy-quaternion and spherical-functions * [py-numpy-quaternion] removed python restriction * [py-numpy-quaternion] added scipy and numba variants * [py-numpy-quaternion] fixing unicode Co-authored-by: Sid Pendelberry <sid@rit.edu>
2022-06-06[py-httpx] added version 0.22.0 (#29806)Jen Herting1-6/+28
* [py-httpx] python dependencies are type=('build', 'run') * [py-httpx] py-wheel is now implied by PythonPackage * [py-httpx] fixed older version dependencies * [py-httpx] added version 0.22.0
2022-06-06Correcting library path of hsakmt-roct for Centos7 and cleaning up the patch ↵renjithravindrankannath2-53/+48
file. (#30885) * Correcting library path of hsakmt-roct and cleaning up the patch file. * Delete 007-library-path.patch
2022-06-06py-torchmetrics: add v0.9.0 (#31000)Adam J. Stewart2-2/+8
2022-06-06quantum-espresso: no need of patch and hdf5 is optional for pw2qmcpack (#30884)Ye Luo1-2/+12
2022-06-06Kokkos SYCL AOT flags (#30723)Daniel Arndt1-0/+15
* Kokkos SYCL AOT flags * Improve selecting the Intel GPU arch
2022-06-06py-black: new version/variants/maintainer (#30999)Adam J. Stewart2-41/+29
2022-06-06GCC: add Apple M1 support (#30825)Adam J. Stewart1-2/+8
Co-authored-by: Seth R. Johnson <johnsonsr@ornl.gov>
2022-06-06nvhpc: add v22.5 (#30845)Filippo Spiga1-0/+4
2022-06-06dihydrogen: propagate `cuda_arch` to nvshmem (#30886)Brian Van Essen1-0/+1
2022-06-06quantum-espresso: support libxc also for autotools build (#30895)Simon Pintarelli1-4/+7
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