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2022-10-27intel-mpi: add `cpio` as build dependency (#33555)Mosè Giordano1-0/+1
2022-10-27oce: rework recipe to prefer old intel-tbb (#33553)Massimiliano Culpo1-6/+8
2022-10-27hiop: add version 0.7.1 (#33543)Satish Balay1-0/+1
2022-10-27tower-agent and tower-cli: update versions (#33545)Marco De La Pierre2-0/+32
2022-10-26cppunit: add static/shared variant, add version 1.15_20220904 (#33522)iarspider2-2/+39
2022-10-26opencascade: new version 7.6.3 (#33518)Wouter Deconinck1-0/+5
* opencascade: new version 7.6.3 * opencascade: correct hash for 7.6.3 Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2022-10-26CLHEP: Add checksum for clhep 2.4.5.4, 2.4.6.0; cleanup recipe (#33521)iarspider1-0/+7
* CLHEP: patching of CMake policy not needed for new-ish versions * Add checksum for clhep 2.4.5.4, 2.4.6.0; cleanup recipe
2022-10-26libcatalyst: add 2.0.0-rc3 release (#33322)Ben Boeckel1-0/+3
2022-10-26Windows: fix bootstrap and package install failure (#32942)百地 希留耶3-0/+42
* Add patches for building clingo with MSVC * Help python find clingo DLL * If an executable is located in "C:\Program Files", Executable was running into issues with the extra space. This quotes the exe to ensure that it is treated as a single value. Signed-off-by: Kiruya Momochi <65301509+KiruyaMomochi@users.noreply.github.com>
2022-10-26slepc: fix for slepc+cuda ^petsc+kokkos+cuda ^kokkos+cuda+wrapper (#33529)Satish Balay1-1/+9
kokkos wrappers modify mpicxx - breaking slepc build.
2022-10-26new version (#33537)Miroslav Stoyanov1-1/+2
2022-10-26Allow for packages with multiple build-systems (#30738)Massimiliano Culpo69-1250/+1227
This commit extends the DSL that can be used in packages to allow declaring that a package uses different build-systems under different conditions. It requires each spec to have a `build_system` single valued variant. The variant can be used in many context to query, manipulate or select the build system associated with a concrete spec. The knowledge to build a package has been moved out of the PackageBase hierarchy, into a new Builder hierarchy. Customization of the default behavior for a given builder can be obtained by coding a new derived builder in package.py. The "run_after" and "run_before" decorators are now applied to methods on the builder. They can also incorporate a "when=" argument to specify that a method is run only when certain conditions apply. For packages that do not define their own builder, forwarding logic is added between the builder and package (methods not found in one will be retrieved from the other); this PR is expected to be fully backwards compatible with unmodified packages that use a single build system.
2022-10-26py-torchmetrics: add v0.10.1 (#33535)Adam J. Stewart1-0/+1
2022-10-26pflotran: fix build errors with gfortran@10: (#33527)Satish Balay1-0/+5
>> 38 Error: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1)
2022-10-26petsc, py-petsc4py: add 3.18.1 (#33525)Satish Balay2-0/+2
2022-10-26Updating package file for osu-micro-benchmarks for the 6.2 release (#33512)MatthewLieber1-1/+2
* Updating package file for osu-micro-benchmarks for the 6.2 release * updating sha hash for 6.2 tarball Co-authored-by: natshineman <shineman.5@osu.edu>
2022-10-26[mochi-margo] added version 0.10 (#33519)Matthieu Dorier1-0/+1
2022-10-26Add netcdf-c 4.9.0 and netcdf-fortran 4.6.0 (supersedes #31953) (#33514)Dom Heinzeller2-1/+21
* Add netcdf-c 4.9.0 and netcdf-fortran 4.6.0 With v4.9.0 netcdf-c introduces zstandard compression option which is added as a variant. * Fix when= in dependency * Turn on variant zstd by default Co-authored-by: kgerheiser <kgerheiser@icloud.com>
2022-10-26alquimia, pflotran, plasma, py-mpi4py, strumpack - add in new versions (#33447)Satish Balay5-2/+15
* alquimia, pflotran, plasma, py-mpi4py, strumpack - add in new versions * Fix hip CI failure Co-authored-by: eugeneswalker <eugenesunsetwalker@gmail.com>
2022-10-25elfutils: add version 0.187 (#33419)Mark W. Krentel1-2/+9
* elfutils: add version 0.187 * Move conflict for debuginfod to variant when clause. * Add myself as maintainer.
2022-10-25Scotch: 'link_error_lib' variant - Link error handling library to ↵MichaelLaufer3-1/+28
libscotch/libptscotch (#33297)
2022-10-25New packages: mlst, any2fasta, perl-carp, perl-class-method-modifiers, ↵Luke Diorio-Toth7-0/+157
perl-role-tiny, perl-moo, perl-sub-quote (#33274) * added mlst and deps * added install() to any2fasta * added script dependencies, builds OK * fixed style * Update var/spack/repos/builtin/packages/any2fasta/package.py Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2022-10-25udunits: Update download URL (#32390)Rémi Lacroix1-4/+19
* udunits: Update download URL * udunits: Deprecate older versions Unidata now only provides the latest version of each X.Y branch. Older 2.2 versions have been deprecated accordingly but are still available in the build cache. Co-authored-by: RemiLacroix-IDRIS <RemiLacroix-IDRIS@users.noreply.github.com> Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2022-10-25Update wgrib2 from JCSDA/NOAA-EMC fork (#32857)Dom Heinzeller1-14/+189
* Update wgrib2 from JCSDA/NOAA-EMC fork * var/spack/repos/builtin/packages/wgrib2/package.py: fix typo in comment, add conflict for variants netcdf3, netcdf4 * wget hdf5/netcdf4 internal dependencies for wgrib2 * Black-format var/spack/repos/builtin/packages/wgrib2/package.py * More format changes in var/spack/repos/builtin/packages/wgrib2/package.py
2022-10-25Gmsh: Fix CGNS support for version up to 4.7.1 (#33508)Rémi Lacroix1-0/+1
Gmsh started supporting the "scoping" option of CGNS in version 4.8.0.
2022-10-25cdo: add new release 2.1.0 (#33303)Brian Spilner1-0/+5
2022-10-24fix problems with missing rocm dependencies (#33381)Miroslav Stoyanov1-1/+37
2022-10-24Add py-myst-parser & update py-mdit-py-plugins and py-sphinxcontrib-mermaid ↵Zach Jibben4-4/+64
(#33427) * Update py-sphinxcontrib-mermaid * Add py-myst-parser * Fix py-mdit-py-plugins and py-myst-parser dependencies * Add py-exhale package * Update var/spack/repos/builtin/packages/py-mdit-py-plugins/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-myst-parser/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-myst-parser/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-myst-parser/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update py-exhale and py-myst-parser dependencies * Add @svenevs as py-exhale maintainer * Update var/spack/repos/builtin/packages/py-mdit-py-plugins/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-10-24Add filename to text_to_relocate only if it needs to be relocated (#31074)iarspider1-0/+27
Scan the text files for relocatable prefixes *before* creating a tarball, to reduce the amount of work to be done during install from binary cache. Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2022-10-24cppcheck: add version 2.9 (#33491)Jon Rood1-0/+1
2022-10-24update fms package for v2022.04 (#33484)Ryan Mulhall1-1/+2
Co-authored-by: rem1776 <Ryan.Mulhall@noaa.gov>
2022-10-24chai +rocm: use hipcc as CMAKE_CXX_COMPILER (#33479)eugeneswalker1-0/+7
2022-10-24py-drep and ANIcalculator: new packages (#33467)Luke Diorio-Toth2-0/+79
* py-drep: new package * fixed file extension * added darwin conflict * py-checkm-genome and py-pysam: bumped version and updated deps (#10) added checkm and pysam deps * added dep documentation and fixed style * changed checkm and pysam back to dev version for upstreaming * added url and perl run dep * fixed style
2022-10-23py-gcovr: add 5.2 (#33476)Michael Kuhn1-2/+7
2022-10-23ca-certificates-mozilla: add 2022-10-11 (#33331)Michael Kuhn1-0/+5
2022-10-23helics: Add version 3.3.1 (#33475)HELICS-bot1-0/+1
2022-10-23sqlite: add 3.39.4 (#33339)Michael Kuhn1-0/+1
2022-10-23gettext: add 0.21.1 (#33333)Michael Kuhn1-0/+3
2022-10-23util-linux, util-linux-uuid: add 2.38.1 (#33342)Michael Kuhn2-1/+3
2022-10-22python: add 3.10.8, 3.9.15, 3.8.15, 3.7.15 (#33340)Michael Kuhn1-2/+6
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2022-10-22zlib: add 1.2.13 (#33337)Michael Kuhn1-1/+6
2022-10-22openblas@0.3.21: fix misdetection of gfortran on cray (#33444)eugeneswalker2-0/+57
2022-10-22netlib-scalapack %cce: add -hnopattern to fflags (#33422)eugeneswalker1-0/+7
2022-10-22acts: new versions (#32969)Wouter Deconinck3-20/+94
* acts: new versions In the 20.x release line, these are the changes, https://github.com/acts-project/acts/compare/v20.0.0...v20.2.0 - `option(ACTS_SETUP_ACTSVG "Build ActSVG display plugin" OFF)` introduced in v20.1.0 - `option(ACTS_USE_SYSTEM_ACTSVG "Use the ActSVG system library" OFF)` introduced in v20.1.0 - `option(ACTS_BUILD_PLUGIN_ACTSVG "Build SVG display plugin" OFF)` introduced in v20.1.0 - `option(ACTS_USE_EXAMPLES_TBB "Use Threading Building Blocks library in examples" ON)` introduced in v20.1.0 - `option(ACTS_EXATRKX_ENABLE_ONNX "Build the Onnx backend for the exatrkx plugin" OFF)` introduced in v20.2.0 - `option(ACTS_EXATRKX_ENABLE_TORCH "Build the torchscript backend for the exatrkx plugin" ON)` introduced in v20.2.0 In the 19.x release line, these are the changes: https://github.com/acts-project/acts/compare/v19.7.0...v19.9.0 - `option(ACTS_USE_EXAMPLES_TBB "Use Threading Building Blocks library in examples" ON)` introduced in v19.8.0 The new build options have not been implemented in this commit but will be implemented next. * acts: new variant svg * actsvg: new package * actsvg: style fixes * acts: new versions 20.3.0 and 19.10.0 * astsvg: depends_on boost googletest * actsvg: new version 0.4.26 (and style fix) Includes fix to build issue when +examples, https://github.com/acts-project/actsvg/pull/23 * acts: new variant tbb when +examples @19.8:19 @20.1: * acts: set ACTS_USE_EXAMPLES_TBB * acts: no need for ACTS_SETUP_ACTSVG * acts: move tbb variant to examples block * acts: ACTS_USE_SYSTEM_ACTSDD4HEP removed in 20.3 * acts: use new ACTS_USE_SYSTEM_LIBS * acts-dd4hep: new version 1.0.1, maintainer handle fixed * acts: simplify variant tbb condition
2022-10-21arborx: add new release 1.3 (#33402)Andrey Prokopenko1-2/+15
* arborx: add new release 1.3 * [@spackbot] updating style on behalf of aprokop
2022-10-21honor global spack flags (#33470)Chris White1-0/+17
2022-10-21raja@0.14.0 +rocm: add -std=c++14 to HIP_HIPCC_FLAGS (#33456)eugeneswalker1-3/+5
2022-10-21Update maintainers for NOAA/EMC-maintained libraries (#33469)Alex Richert26-26/+121
* Update maintainers for NOAA/EMC-maintained libraries * Fix line lengths * Fix line length for gptl
2022-10-21openfast: Fix package file (#33454)Jon Rood1-23/+25
* Fix openfast package file. * Fix openfast package file. * Fix typo. * [@spackbot] updating style on behalf of jrood-nrel Co-authored-by: jrood-nrel <jrood-nrel@users.noreply.github.com>
2022-10-21py-instrain: added required + optional dependency (#33465)Luke Diorio-Toth1-0/+8
* added py-instrain dependencies * fixed style * removed coverm dep until I have a working coverm package * added dep documentation
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