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2019-11-26Py-pymol package has been updated to the latest version (#13764)Hector Martinez-Seara2-13/+31
* Added new package libmmtf-cpp required by py-pymol * Added SPDX-License-Identifier to MIT * Updated py-pymol to version 2.3.0 * py-pymol: Added mising py-pmw dependency * py-pymol: flake8 minor change * py-pymol: Added patch for apbstools_tcltk8.6 This patch is borrowed from archlinux https://bugs.archlinux.org/task/39526 * libmmtf-cpp: flake8 compliance * libmmtf-cpp: flake8 compliance * libmmtf-cpp: change license to (Apache-2.0 OR MIT) when refering to the MIT license * libmmtf-cpp: Added header text about license as in examples * py-pymol: removed unnecesary dependency mesa-glu * py-pymol: removed unnecesary patch * py-pymol: Removed empty line at the end of the file to comply with flake8.
2019-11-26cmake: add support for xlf and ninja (#13796)Christoph Junghans1-0/+4
2019-11-26httperf: added new package (#13875)darmac1-0/+26
2019-11-25Add the py-coloredlogs package (#13852)Joe Koning1-0/+18
* Add the py-coloredlogs package * Remove extraneous line. * Remove dashed line. * Add version for humanfriendly dep and build to type. * Change source url to use pypi.
2019-11-25Forgot a trailing _PLUGIN (#13884)Hadrien G1-1/+1
2019-11-25add new versions to py-mistune (#13887)Andreas Baumbach1-0/+8
2019-11-25Add intel-tbb versions 2019.5 to 2019.8 (#13891)Tim Haines1-0/+4
2019-11-25Improved library access for lm-sensors and implemented use in papi. (#13885)G-Ragghianti2-4/+11
* Improved library access for lm-sensors and implemented use in papi. * Fixed comment formatting * Removed explicit "None" from return of libs(). * Added two new software release versions.
2019-11-25add package cuda@10.2.89 (#13819)René Widera1-2/+6
* add package cuda@10.2.89 add CUDA 10.2 support * CudaPackage: Add 10.2 Conflicts * CUDA: Modernize Run Environment See #11115
2019-11-25Updated LAMMPS package to use gpu and kokkos options. (#13886)David M. Rogers1-2/+25
2019-11-25Fix ROOT dependencies (for +r variant) (#13839)iarspider1-2/+2
2019-11-25Mapnik: fix runtime error involving py-pycairo and PDF (#13865)Sinan2-5/+7
* fix runtime error involving py-pycairo and PDF * Update var/spack/repos/builtin/packages/py-python-mapnik/package.py Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * fix env setup
2019-11-25Add the py-importlib-resources package (#13854)Joe Koning1-0/+22
* Add the py-importlib_re package * Rename package to conform with spack naming convention. * Rename package to py-importlib-resources Add python depend modules for previous python versions and depends_on python. * Add whitespaces.
2019-11-25cctools: fix python related error. (#13802)Toyohisa Kameyama3-3/+144
* cctools: fix python related error. * patch bugfix.
2019-11-25Add latest version of bazel (#13813)Sinan23-751/+315
* use bazel commit in #13112, and add version 0.24.1, and corresponding cc_env patch * undo preferred java version by dodo47 * patch for v0.26 * Update install steps * Add patches for more versions * Add unit tests * Update patches for new Spack env vars * env is already defined, use spackEnv
2019-11-25py-celery: added new package (#13851)Joe Koning1-0/+57
2019-11-25py-amqp: added new package (#13848)Joe Koning1-0/+22
* Add the py-amqp package * Add the py-vine dependency. * Add vine version and python dependency.
2019-11-25py-qtpy: enable use with pyqt5, pyside and pyside2 (#13837)iarspider1-2/+12
2019-11-25py-kombu: added new package (#13855)Joe Koning1-0/+23
2019-11-25prank: use Spack compilers and remove x86_64 opts from Makefile (#13877)t-karatsu1-0/+9
2019-11-25netperf: added new package (#13876)darmac1-0/+19
2019-11-25ltp: added new package (#13878)darmac1-0/+25
2019-11-25ACTS v0.11.0 + adding maintainer (#13880)Hadrien G1-0/+2
2019-11-25add new package : py-cssselect (#13879)darmac1-0/+21
2019-11-24ack: Fix install modifying download cache (#13836)Oliver Breitwieser1-5/+7
This makes several installs from the same download cache impossible once the hash of the used perl-install changes. Fixes: #13824 Change-Id: I5f10d9d54ae999d0ca7e4171f989dfca2e6a7169
2019-11-24tinker: initial commit (#13869)Christoph Junghans2-0/+137
2019-11-23ncurses: don't run strip internally (#13843)Christoph Junghans1-2/+3
* ncurses: don't run strip internally * setup_environment -> setup_build_environment * fix ABI change
2019-11-23py-matplotlib backend dependencies needed at runtime (#13867)Adam J. Stewart1-20/+20
2019-11-23Add py-scipy 1.3.3 (#13866)Adam J. Stewart1-1/+2
2019-11-23Add the py-humanfriendly package (#13853)Joe Koning1-0/+16
2019-11-23Fix setuptools dependency in py-snowballstemmer (#13844)Adam J. Stewart1-1/+1
2019-11-23Add the py-billiard package (#13849)Joe Koning1-0/+19
2019-11-23Add the py-parse package (#13856)Joe Koning1-0/+18
2019-11-23Add the py-vine package (#13857)Joe Koning1-0/+18
2019-11-23likwid: added version 5.0.0 (#13858)Sajid Ali1-1/+3
2019-11-23py-cached-property: added new package at v 1.5.1 (#13850)Joe Koning1-0/+17
2019-11-23ethtool: new package at version 4.8 (#13864)darmac1-0/+24
2019-11-22petsc: add version 3.12.2 (#13859)Satish Balay1-0/+1
2019-11-22New package: py-wub, with supporting fixes (#13773)George Hartzell4-9/+79
* Add py-wub, with supporting fixes - add py-wub - add py-pycmd because py-wub needs it - update py-statsmodels, which needs at least v0.9.0 to work with python3.7 because cython. * Update based on Adam's comments * Fix dependency types for py-six in py-wub * statsmodels tests fail, update comment w/ Issue # The statsmodels tests weren't run in the previous version of the package. If I enable them, the fail. Update the package comment with the statsmodels issue I opened to track the problem: https://github.com/statsmodels/statsmodels/issues/6263 * Update dependency types in py-wub/package.py * flake8 cleanups * Make statsmodels tests work - need to use patsy@0.5.1: - need to run the tests from within the build/lib* dir
2019-11-21votca-*: add v1.5.1 (#13822)Christoph Junghans4-3/+7
2019-11-21Add mg, a gnu-emacs like fork of microemacs (#13812)George Hartzell1-0/+37
* Add mg, a gnu-emacs like fork of microemacs * Use Package, since not really an Autotools package Switch from AutotoolsPackage to Package. Even though mg has a configure script, it's not really an Autotools package. * Need to also provide --prefix to configure
2019-11-21cbtf-krell: add rpcsvc-proto and libtirpc dependency. (#13800)Toyohisa Kameyama1-0/+6
2019-11-21doxygen: added missing dependencies to the package (#10589)Elizabeth Fischer1-0/+2
See http://www.doxygen.nl/manual/install.html
2019-11-20texinfo: fix unescaped braces, and update locale handling (#13815)t-karatsu5-0/+86
* texinfo: Fix unescaped braces for older version. * texinfo: update locale handling.
2019-11-20update Argobots and BOLT (#13765)Shintaro Iwasaki2-1/+5
* argobots: update to 1.0rc2 * bolt: update to 1.0rc3 * argobots/bolt: add maintainers * argobots: use "master" for the master branch
2019-11-20added hmmer v 3.3 (#13793)Douglas Duckworth1-1/+2
2019-11-20Updated versions numbers for Aluminum and Hydrogen. (#13814)Brian Van Essen2-0/+5
2019-11-20ampliconnoise: Change return type of function. (#13766)t-karatsu2-7/+72
* ampliconnoise: Change function type. * ampliconnoise: updated api call to setup run environment
2019-11-20find-circ: a new package. (#13767)健美猞猁1-0/+34
* find-circ: a new package. * flake8.
2019-11-20miranda: a new package. (#13768)健美猞猁1-0/+16
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