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2023-10-31Fix interaction of spec literals that propagate variants with unify:false ↵Massimiliano Culpo2-0/+38
(#40789) * Add tests to ensure variant propagation syntax can round-trip to/from string * Add a regression test for the bug in 35298 * Reconstruct the spec constraints in the worker process Specs do not preserve any information on propagation of variants when round-tripping to/from JSON (which we use to pickle), but preserve it when round-tripping to/from strings. Therefore, we pass a spec literal to the worker and reconstruct the Spec objects there.
2023-10-31Seacas: Update for latest seacas releaes version (#40698)Greg Sjaardema1-3/+8
2023-10-30Added NVML and cgroup support to the slurm package (#40638)G-Ragghianti2-0/+22
* Added NVML support to the slurm package * dbus package is required for cgroup support * Fixing formatting * Style fix * Added PAM support * Added ROCm SMI support
2023-10-30selalib: add (sca)lapack dependency (#40667)Freifrau von Bleifrei1-0/+2
* selalib: add (sca)lapack dependency * selalib: change when "-mpi" to "~mpi"
2023-10-30dd4hep: Add tag for version 1.27 (#40776)Thomas Madlener1-0/+1
2023-10-30Add hdf5 version 1.14.3. (#40786)Larry Knox1-2/+12
Add hdf5 version 1.10.11. Update version condition for adding h5pfc->h5fc symlink. File h5pfc exists in versions 1.10.10 and 1.10.22.
2023-10-30adding sha for OMB 7.3 release (#40784)MatthewLieber1-0/+1
Co-authored-by: Matt Lieber <lieber.31@osu.edu>
2023-10-30squashfuse: add version 0.5.0 (#40775)Andrew W Elble1-1/+9
2023-10-30freesurfer: fix support for linux (#39864)marcost21-2/+23
* Load the script file during enviroment setup so that all the enviroment variables are set properly * Patch csh/tcsh so that it uses spacks via env * Update SHA for latest version * Extend shebang to perl and fix up the regex
2023-10-30must: remove release candidates (#40476)Alec Scott1-4/+1
2023-10-30spectre: add v2023.10.11 (#40463)SXS Bot1-0/+3
Co-authored-by: nilsvu <nilsvu@users.noreply.github.com>
2023-10-30Get utilities necessary for successful PIO build (#40502)Brian Vanderwende1-0/+5
2023-10-30linaro-forge: add v23.0.4 (#40772)RichardBuntLinaro1-0/+9
2023-10-30Fetch recola from gitlab and add a new version of collier (#40651)Juan Miguel Carceller2-4/+12
Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2023-10-30ISPC: Drop ncurses workaround in favor of patch (#39662)kwryankrattiger1-2/+7
ISPC had a bug in their lookup for NCurses, this was fixed upstream and backported here.
2023-10-30pegtl: add v3.2.7 (#35687)Federico Ficarelli1-0/+1
2023-10-30justbuild: add version 1.2.2 (#40701)Alberto Sartori1-0/+1
2023-10-30aluminum: make network variants "sticky" (#40715)Brian Van Essen1-0/+2
2023-10-30acts: new variant +binaries when +examples (#40738)Wouter Deconinck1-0/+4
Co-authored-by: wdconinc <wdconinc@users.noreply.github.com>
2023-10-30RAJA: add "plugins" variant (#40750)wspear1-0/+2
2023-10-30Fix an issue with using the environment variable `MACHTYPE` which is not ↵Veselin Dobrev2-2/+6
always defined (#40733) * Fix an issue reported here: https://github.com/spack/spack/pull/36154#issuecomment-1781854894 * [@spackbot] updating style on behalf of v-dobrev
2023-10-30py-pandas: add v2.1.2 (#40734)Adam J. Stewart1-2/+4
2023-10-30PyTorch: build with external fp16 (#40760)Adam J. Stewart2-28/+6
2023-10-30pcl: checksum new versions (#39039)Martin Aumüller1-1/+18
2023-10-30exago: fix exago missing on PYTHONPATH when `+python` (#40748)Cameron Rutherford1-0/+4
2023-10-30mfem: support petsc+rocm with spack-installed rocm (#40768)Veselin Dobrev1-1/+7
2023-10-29acts: add v28.1.0:30.3.2 (#40723)Wouter Deconinck1-0/+16
* acts: new version from 28.1.0 to 30.3.1 * acts: new version 30.3.2 * acts: new variant +podio
2023-10-29py-numcodecs: fix broken sse / avx2 variables (#40754)Harmen Stoppels1-4/+5
2023-10-29Add liggght patched for newer compiler (#38685)Aoba4-6/+350
* Add liggght patched for newer compiler Add C++ 17 support Add Clang and Oneapi support * Add maintainers * Fix format in liggghts * Fix maintainers before versions Co-authored-by: Alec Scott <alec@bcs.sh> * Fix style and user to usr * Update package.py --------- Co-authored-by: Alec Scott <alec@bcs.sh>
2023-10-28mercury: add v2.3.1 (#40749)Jerome Soumagne1-0/+1
2023-10-28py-moarchiving: new package (#40558)Lydéric Debusschère1-0/+25
* [add] py-moarchiving: new package * py-moarchiving: update from review: description, variant default value is False, switch when and type --------- Co-authored-by: LydDeb <lyderic.debusschere@eolen.com>
2023-10-28py-generateds: new package (#40555)Lydéric Debusschère1-0/+27
* [add] py-generateds: new package * py-generateds: Update from review Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com> * py-generateds: add versions 2.41.5, 2.42.1, 2.42.2, 2.43.1 and 2.43.2 --------- Co-authored-by: LydDeb <lyderic.debusschere@eolen.com> Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com>
2023-10-28NCCL: Add version 2.19.3-1 (#40704)Rémi Lacroix1-0/+1
2023-10-28New version of py-langsmith (#40674)Jen Herting1-0/+1
Co-authored-by: Benjamin Meyers <bsmits@rit.edu>
2023-10-28py-bluepyemodel: opensourcing with dependencies (#40592)Erik Heeren9-0/+266
* py-bluepyemodel: new package with dependencies * py-morphio: add MPI as dependency to avoid failing builds * Formatting * py-bluepyefe: no need to set NEURON_INIT_MPI * py-morphio: unifurcation branch is ancient history * py-bluepyopt: only set NEURON_INIT_MPI with +neuron * py-efel: get rid of old version * py-morph{-tool,io}: rename develop to master to match branch * py-bluepyefe: unset PMI_RANK is also neuron-related * py-bluepyopt: PMI_RANK is also neuron-related * Implement review remarks * py-morph-tool, py-neurom: small fixes * py-morphio: reword dependencies
2023-10-28py-comm: add 0.1.4 (#40669)Manuela Kuhn1-1/+4
2023-10-28py-numpy: add v1.26 (#40057)Adam J. Stewart8-156/+202
2023-10-27hipsycl: restrict compatibility with llvm for v0.8.0 (#40736)Mosè Giordano1-0/+3
2023-10-27e4s ci stacks: add exago specs (#40712)eugeneswalker1-1/+1
* e4s ci: add exago +cuda, +rocm builds * exago: rename 5-18-2022-snapshot to snapshot.5-18-2022 * disable exago +rocm for non-external rocm ci install * note that hiop +rocm fails to find hip libraries when they are spack-installed
2023-10-27mgard@2020-10-01 %oneapi@2023: turn of c++11-narrowing via cxxflags (#40743)eugeneswalker1-0/+6
2023-10-27octopus: split netcdf-c and netcdf-fortran dependency (#40685)Ashwin Kumar Karnad1-2/+3
2023-10-27strumpack: add version 7.2.0 (#40732)Satish Balay1-0/+1
2023-10-27gromacs: default to external blas & lapack (#40490)Harmen Stoppels1-28/+8
* gromacs: default to external blas & lapack * drop vendored lapack/blas altogether
2023-10-27Fixes and options for package spglib (#40684)dmt41-1/+6
* Fix cmake_args for spglib v2.1.0+ * Add option to build fortran interface in package spglib * fix style as sugested by ci/prechecks/style * Enable fortran variant from v1.16.4 as suggested Co-authored-by: Rocco Meli <r.meli@bluemail.ch> --------- Co-authored-by: Rocco Meli <r.meli@bluemail.ch>
2023-10-27gromacs: fix version branch in intel fftw (#40489)Harmen Stoppels1-1/+1
2023-10-27akantu: use f-strings (#40466)Alec Scott1-6/+4
Co-authored-by: Nicolas Richart <nrichart@users.noreply.github.com>
2023-10-26plasma: add version 23.8.2 (#40728)Satish Balay1-0/+2
2023-10-26itk: misc fixes (#39832)Carlos Bederián1-2/+7
* itk: patch missing include for newer compilers * itk: The package doesn't use MPI * itk: package requires the high-level hdf5 api * itk: patch url with ?full_index=1 * itk: point to 4041 commit in master * itk: don't constrain hdf5 with ~mpi
2023-10-26ldak: add v5.2 & add maintainer (#40710)snehring1-18/+55
* ldak: update to 5.2, add maintainer * ldak: use compiler.openmp_flag
2023-10-26dataTransferKit: add v3.1.1, v3.1.0 (#40556)Daniel Arndt1-2/+5
* Update DataTransferKit for 3.1.1 release * Require Trilinos-14 for 3.1.0 and higher
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