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* py-scikit-image: add 0.19.3
* Update var/spack/repos/builtin/packages/py-scikit-image/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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SDK deployment targets being able to validate and run VTK-m via spack
deployments, so examples should be installed.
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* LLVM: replace libelf dependency with elf
I didn't test this extensively, but in CMS LLVM builds just fine with elfutils.
* [@spackbot] updating style on behalf of iarspider
Co-authored-by: iarspider <iarspider@users.noreply.github.com>
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* exiv2: add new versions
* babl: new package required to build GIMP
* gegl: new package required to build GIMP
* gexiv2: new package required to build GIMP
* libmypaint: new package required to build GIMP
* mypaint-brushes: new package required to build GIMP
* vala: new package required to build GIMP
* GIMP: new package definition for building GIMP-2.10 from source
* libjxl: update for 0.7.0
* libwmf: a library for reading vector images in Windows Metafile Format (WMF)
* libde265: an open source implementation of the h.265 video codec
* libwebp: add new versions
* GIMP: additional variants for building GIMP-2.10 from source
* libde265: remove boilerplate
* fixes for style precheck
* updates based on feedback
* fixes for style precheck
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* rct: update packages (RE, RG, RP, RS, RU) with new versions
* re: fixed radical-pilot requirement for radical-entk
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perl+threads. (#34076)
Update the depends_on("perl") to depends_on("perl+threads").
This and #34074 is needed to properly handle e.g. the perl-Thread-Queue
rpm package:
It may not be installed on RedHat-based hosts, which can lead to automake
build failures when `spack external find perl` or `spack external find --all`
was used to use the system-provided perl install.
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Some variants have MPI dependencies, make sure they can be used only when the `mpi` variable is enabled.
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* adding 2nd bunch of nf-core deps from update/nextflow-tools
* Update var/spack/repos/builtin/packages/py-a2wsgi/package.py
* Update var/spack/repos/builtin/packages/py-apispec/package.py
* Update var/spack/repos/builtin/packages/py-bagit-profile/package.py
* Update var/spack/repos/builtin/packages/py-bagit-profile/package.py
* Update var/spack/repos/builtin/packages/py-bagit-profile/package.py
* Update var/spack/repos/builtin/packages/py-bdbag/package.py
* Update var/spack/repos/builtin/packages/py-schema-salad/package.py
* Update var/spack/repos/builtin/packages/py-schema-salad/package.py
* Update var/spack/repos/builtin/packages/py-tuspy/package.py
* Update var/spack/repos/builtin/packages/py-schema-salad/package.py
* Update var/spack/repos/builtin/packages/py-schema-salad/package.py
* Update var/spack/repos/builtin/packages/py-bdbag/package.py
* Update var/spack/repos/builtin/packages/py-bdbag/package.py
* Update var/spack/repos/builtin/packages/py-bioblend/package.py
* Update var/spack/repos/builtin/packages/py-circus/package.py
* Update var/spack/repos/builtin/packages/py-circus/package.py
* Update var/spack/repos/builtin/packages/py-cloudbridge/package.py
* Update var/spack/repos/builtin/packages/py-cloudbridge/package.py
* Apply suggestions from code review
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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* nextflow recipe: added latest stable version
* tower-cli recipe: added latest release
* recipes tower-agent and tower-cli renamed to nf-tower-agent and nf-tower-cli
* recipes nf-tower-agent and nf-tower-cli: small fix
* nf-core-tools recipe: added most py- dependencies
* nf-core-tools: recipe without galaxy-tool-util (for testing)
* fixed typos in py-yacman recipe
* fixed typos in py-pytest-workflow recipe
* fixed typo in nf-core-tools recipe
* fixed typos in py-yacman recipe
* fixes in recipes for py-questionary and py-url-normalize
* fixes to py-yacman recipe
* style fixes to py- packages that are dependencies to nf-core-tools
* fix in py-requests-cache recipe
* added missing dep in py-requests-cache recipe
* nf-core-tools deps: removed redundant python dep for py packages oyaml and piper
* nf-core-tools recipe: final, incl dep on py-galaxy-tool-util
* nf-core-tools: new version with extra dependency
* commit to merge packages on focus from update/nextflow-tools
* nf-core: commenting galaxy dep for this pr
* Update var/spack/repos/builtin/packages/py-requests-cache/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-requests-cache/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* removed nf-core-tools from this branch, will be back at the end
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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* spectre: add v2022.12.16
* [@spackbot] updating style on behalf of sxs-bot
Co-authored-by: sxs-bot <sxs-bot@users.noreply.github.com>
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Make the package a proper ROCm package.
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Co-authored-by: Sebastian Grimberg <sjg@amazon.com>
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by oneapi packages (#34253)
Co-authored-by: Sean Koyama <skoyama@anl.gov>
Co-authored-by: Robert Cohn <robert.s.cohn@intel.com>
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Signed-off-by: Loïc Pottier <pottier1@llnl.gov>
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Co-authored-by: Bernhard Kaindl <43588962+bernhardkaindl@users.noreply.github.com>
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