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2018-11-13LIBXSMM 1.10 (#9813)Hans Pabst1-23/+24
* LIBXSMM 1.10 * Accurately replaced MD5 with SHA256 sums (libxsmm).
2018-11-13aragorn: add version 1.2.36 (#9817)Eric1-0/+1
2018-11-13minimap2: Add versions 2.10 and 2.14 (#9818)Eric1-0/+3
* Also add missing zlib dependency
2018-11-13New Package: Nyancat (#9819)Quinn1-0/+36
* nyancat: adding the most important piece of software ever written * nyancat: some formatting updates * nyancat: flake8 error fix
2018-11-13charm++: add version 6.9.0 (#9827)Matthias Diener1-0/+1
2018-11-13gromacs: added 2018.[34] (#9828)Christoph Junghans1-0/+2
2018-11-13hypre: patch only @2.13.0 and @2.14.0 on darwin (#9832)Geoffrey Oxberry1-1/+1
2018-11-13wt: add missing pkgconfig dependency and fix boost version range (#9835)Michael Kuhn1-1/+2
wt does not build with newer versions of boost.
2018-11-13libssh: fix fetching and add 0.8.5 (#9779)Michael Kuhn1-1/+7
Required for openssl@1.1 compatibility.
2018-11-13libevent: add 2.1.8 and 2.0.22 (#9777)Michael Kuhn1-3/+14
- 2.1.8 is required for openssl@1.1 compatibility - Introduce url_for_version since the URL has changed starting with version 2.0.22
2018-11-13Add new version 1.2.0 to the package (#9837)Valentin Clement (バレンタイン クレメン)1-0/+1
2018-11-13man-db: add missing gdbm dependency (#9751)Matthias Diener1-0/+1
2018-11-13openssh: add 7.9p1 (#9782)Michael Kuhn1-0/+9
- Required for openssl@1.1 compatibility - Fix openssh's privilege separation path to be below the prefix
2018-11-13Adding Paraview version 5.6. (#9788)Jon Rood1-0/+1
2018-11-13ruby: add 2.5.3 (#9793)Michael Kuhn1-1/+4
Required for openssl@1.1 compatibility.
2018-11-13thrift: add missing pkgconfig dependency (#9834)Michael Kuhn1-0/+1
Without pkgconfig, Spack's openssl cannot be found.
2018-11-13barrnap package: Add versions 0.6 and 0.7 (#9820)Eric1-0/+2
2018-11-13New package: openimageio (#9715)Phil Tooley1-0/+48
2018-11-13New package: dcmtk (#9716)Phil Tooley1-0/+57
2018-11-13Fix pkg-config dependencies (#9738)Michael Kuhn4-4/+4
Replace dependencies on specific pkgconfig implementation (e.g. pkgconf) with dependency on pkgconfig virtual package
2018-11-12gplates package: improvements (#9735)Michael Kuhn1-6/+4
- Add version 2.1.0 - Now that #9264 has been merged, gplates seems to build fine with newer versions of gcc (tested with gcc@8) - When using the ninja generator, gplates can be built in parallel
2018-11-12Add 'pic' variant to netcdf packages (#9605)Alberto Chiusole3-6/+27
2018-11-12TALASS package: replace old version with new version (#9703)Peer-Timo Bremer1-1/+1
New version has bug fixes
2018-11-12libMesh: new version and dependency updates (#9709)Manav Bhatia1-1/+13
* added v1.3.1 checksum * added vtk and petsc variants * bugfix: enable petsc when slepc variant is specified
2018-11-12Open MPI: add versions 3.1.3, 3.0.3, update checksums (#9734)Daniel Topa1-18/+21
All checksums are now sha256
2018-11-12pkgconf: Add 1.5.4 (#9737)Michael Kuhn1-0/+1
2018-11-12chrpath: add new package (#9708)Matthias Diener1-0/+16
2018-11-12version/dependency updates for ilmbase and openexr (#9714)Phil Tooley2-16/+35
* include zlib dependency for openexr, fixes #7274 * version bump to openexr/ilmbase 2.3.0
2018-11-12new package: flatcc (#9695)Cameron Stanavige1-0/+46
2018-11-12nlohmann-json: add new version 3.4.0 (#9692)Axel Huebl1-0/+1
2018-11-12py-numba: update dependencies and versions (#9706)Ross Miller2-4/+15
The latest version of py-numba (0.40.1) wants a newer version of py-llvmlite. Had to add that version to py-llvmlite/package.py.
2018-11-12migrate: new package starting at 3.6.11 (#9707)Justin Stanley1-0/+71
2018-11-12new package: PyH5glance (#9700)Sinan1-0/+22
2018-11-12new package: python htmlgen (#9699)Sinan1-0/+24
2018-11-12gnuplot: add X11 dependency and QT terminal (#9722)Denis Davydov1-3/+32
2018-11-12r-manipulatewidget: new package at 0.10.0 (#9826)Justin Stanley1-0/+28
2018-11-12r-webshot: new package at 0.5.1 (#9824)Justin Stanley1-0/+20
2018-11-12r-callr: adding new dependencies (#9730)Levi Baber1-0/+5
2018-11-12r-convevol: new package at 1.3 (#9767)Justin Stanley1-0/+22
2018-11-12r-miniui: new package at 0.1.1.1 (#9823)Justin Stanley1-0/+20
2018-11-12r-clustergeneration: new package at 1.3.4 (#9765)Justin Stanley1-0/+18
2018-11-09Update Dyninst package file for TBB dependency (#9728)Jim Galarowicz5-7/+12
* Update Dyninst package file for TBB dependency Dyninst master and 10.0 release versions require the tbb package. This mod updates the tbb versions adding the one that dyninst uses and adds the required spack package changes to dyninst/package.py. * Put new version of tbb in proper location, per reviewer comment. * Only depend on tbb if building the development version. * Changes for the release of Dyninst 10.0.0
2018-11-09Introduce fftw-api virtual package for Intel-MKL and FFTW (#9618)Nichols A. Romero2-0/+4
* Introduce FFTW2 and FFT3 providers for Intel-MKL and FFTW Spack packages. * make fftw default package for fftw-api virtual package * virtual package test assertion now provides location of default virtual packages. * Change name of virtual package to fftw-api and used versioned interface.
2018-11-09utils: merge spack.environment into spack.util.environmentTodd Gamblin3-3/+3
- `spack.util.environment` is the new home for routines that modify environment variables. - This is to make room for `spack.environment` to contain new routines for dealing with spack environments
2018-11-08canu: use built-in makefile install (#9726)Justin Stanley1-11/+3
2018-11-08muparser: minor fixes to 2.2.5 and add 2.2.6 with CMake (#9724)Denis Davydov2-4/+27
* muparser: minor fixes to 2.2.5 and add 2.2.6 with CMake * dealii: make muparser optional
2018-11-08ncl: Add 6.5.0 (#9736)Michael Kuhn1-3/+4
2018-11-07r-delayedarray: new dep in latest vers (#9731)Levi Baber1-0/+1
2018-11-07Use the raw compiler path for the preprocessing pass in CLAW driver (#9748)Valentin Clement (バレンタイン クレメン)1-0/+3
2018-11-06New repo for advanced packaging tutorial (#9711)Peter Scheibel13-0/+947
* modified tutorial packages * update hint in hdf5 tutorial file (typo for suggested argument) * add repo.yaml to tutorial repository * update tutorial docs to refer user to tutorial package repository * flake edits * recommend site scope vs. defaults * you don't specify the repo's name when adding a repo, just the path