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2022-05-05ucx: overhaul package recipe (#30215)Harmen Stoppels1-138/+108
- hyphens to underscore in variant names (e.g. `~ib_hw_tm` instead of `~ib-hw-tm`) - disable docs, disable go, drop the unused `doc` variant - `+static +shared` => `libs=static,shared` - `vfs` support (add libfuse@3: dep) - fix `backtrace_detail` for UCX 1.12+ (`--enable-backtrace-detail` => `--with-bfd`) - group variants and sort
2022-05-05baurmc: add new package (#30245)Valentin Volkl1-0/+43
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2022-05-05git: adding subtree support, post-install step, reordered deps (#30400)Jennifer Green1-6/+18
2022-05-05LAPACK: add API compatibility versions (#29828)Adam J. Stewart6-1/+16
2022-05-05rnaz: add version 2.1.1 and git repository to newest version. (#30349)dlkuehn1-0/+7
Co-authored-by: David Kuehn <las_dkuehn@iastate.edu> Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2022-05-05trimmomatic: adding more flexible java dep (#30488)snehring1-1/+2
2022-05-05flatbufffers: patches are in v2.0.0 (#30492)Wouter Deconinck1-2/+2
2022-05-05spectre: add v2022.05.05 (#30493)SXS Bot1-0/+1
Co-authored-by: sxs-bot <sxs-bot@users.noreply.github.com>
2022-05-04qt: fix ~opengl and use_spack_dep (#30487)Seth R. Johnson1-13/+16
2022-05-04UPC++: minor packaging improvements (#30482)Dan Bonachea1-0/+36
* upcxx: Add `spack external find` support * upcxx: Minor tweaks to Shasta support
2022-05-04Add scitokens-cpp recipe and also as a variant for xrootd (#30362)Andrea Valenzuela2-0/+33
* Add scitokens-cpp recipe * Add scitokens-cpp variant in xrootd * Fix typo * Fix flake8 style errors * Update license date Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com> Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2022-05-04Fix professor recipe (#30002)iarspider1-1/+13
* [WIP] Cleanup professor dependencies * Add dependency on ROOT * Remove direct dependency on wxwidgets * `prof-I` tool requires matplotlib with wxwidgets backend, made that optional * Update package.py * Update package.py (#38) * Update package.py * Update package.py
2022-05-04Update gtk-doc depends for tce findings (#30337)David1-1/+2
gtk-doc can call pkg-config when used at runtime, so pkgconfig needs to be a runtime requirement. itstool needs to be a build-time requirement.
2022-05-04gxsview: vtk9 no longer builds libvtkjpeg... (#30340)Olivier Cessenat2-0/+28
2022-05-04Add checksum for py-prompt-toolkit@3.0.29 (#30330)Andrea Valenzuela1-0/+1
Co-authored-by: aandvalenzuela <andrea.valenzuela.ramirez@cern.ch>
2022-05-04curl: tls=mbedtls requires fPIC (#30447)Carlos Bederián1-2/+2
2022-05-04gatk: updating and expanding java dependency (#30476)snehring1-1/+4
2022-05-04Python package: add backup BINDIR setting (#30408)Adam J. Stewart1-0/+1
2022-05-04qt: Assimp dependency specificationa is more nuanced (#30460)Chuck Atkins2-18/+29
libassimp has been a dependency for all of 5.x but expressing that has varied significantly throughout the 5.x lifecycle: v5.0: qt3d uses internal-only libassimp v5.5: external-only libassimp v5.6: either internal or external libassimp via autodetection v5.9: user-selectable internal-vs-external via -assimp v5.14: additional qtquick3d module uses -assimp v5.15: qtquick3d switches to the -quick3d-assimp option * current bug where the incorrect target is setup
2022-05-04GDAL: add v3.4.3 (#30474)Adam J. Stewart1-0/+1
2022-05-04add package: abacus (#30416)Bitllion1-0/+108
* add pacakge: abacus * rename * fix some style bugs * update package:abacus * fix some style bugs * format code * Delete a line of useless comments * updatee abacus
2022-05-04Add mimalloc package with use in HPX and pika (#30457)Mikael Simberg3-5/+32
* Add mimalloc package * Add mimalloc as allocator option to pika * Add mimalloc as allocator option to hpx * Set git property globally instead of per-version in pika, hpx, and mimalloc packages Co-authored-by: Mikael Simberg <mikael.simberg@iki.if>
2022-05-04gpi-2_fix_deps: setup 'gawk' and 'sed' dependencies (#29740)acastanedam1-1/+3
Strictly, `sed` is a `build` and `run` dependency in all gpi-2 versions, whereas `gawk` is a `run` (`build` and `run`) dependency for gpi-2 versions greater or equal (less) than 1.4.0
2022-05-04Add checksum for version 1.1.13 and update dependencies (#30470)Andrea Valenzuela1-1/+3
2022-05-04chameleon: add maintainers information (#30472)fpruvost1-0/+1
2022-05-04pika: Add 0.4.0 release (#30469)Auriane R1-0/+1
2022-05-04Use gccgo to bootstrap go on aarch64 (#30350)Ross Miller2-3/+17
The go-bootstrap package doesn't work on aarch64 platforms, so the only way to build Go is to use gccgo. Also, some versions of gccgo have a bug that prevents them from compiling go (see golang/go#47771), so this patch limits gcc to versions newer than 10.4.0 or 11.3.0. Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2022-05-04chameleon: add new package (#30368)fpruvost1-0/+97
2022-05-04Add checksum for py-plac@1.3.5 (#30327)Andrea Valenzuela1-0/+1
Co-authored-by: aandvalenzuela <andrea.valenzuela.ramirez@cern.ch>
2022-05-04Add checksum for py-networkx@2.7.1 and fix python dependency (#30326)Andrea Valenzuela1-0/+2
Co-authored-by: aandvalenzuela <andrea.valenzuela.ramirez@cern.ch>
2022-05-04mesa: intel needs c99 standard specified under intel. (#30334)Paul Ferrell1-0/+6
2022-05-04maq: adding perl dep, addressing gcc errors (#30312)snehring1-1/+13
2022-05-04namd: place an upper bound on the charmpp dependency version (#30397)lpoirel1-1/+1
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2022-05-04WarpX: add v22.05 (#30467)Axel Huebl2-3/+5
Update `warpx` & `py-warpx` to the latest release, `22.05`.
2022-05-04igv: changing to 'all platforms' version. Adding igvtools variant. (#30379)snehring1-11/+18
2022-05-04py-shapely: add v1.8.2 (#30466)Adam J. Stewart1-0/+1
2022-05-03boost: fix v1.78 build with oneapi (#30463)eugeneswalker2-0/+18
2022-05-04autodock-vina: add versions up to v1.2.3, fixes (#30443)Carlos Bederián3-74/+10
* C++ package, use spack_cxx * download from github, add 1.2.x versions * remove patches already present in 1.1.2-boost-new release * specify boost dependencies
2022-05-04paraview: add LANL/TCE used variants for Paraview (#30336)Paul Ferrell1-0/+14
- Added +eyedomelighting - Added +pagosa - Added +fortran - Added pandas dependency and min version
2022-05-03ncl: constrain hdf5 dependency to version 1.10 (#29607)Glenn Johnson1-1/+1
2022-05-03new package: py-pytaridx (#30444)Harsh Bhatia1-0/+24
* new package: pytaridx * fixed copyright year * Update git link Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * added type in python depends * added pypi link * Update package.py * Update package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-05-04ea-utils: new version, cleanup, and newer gcc compat (#30204)snehring1-8/+30
2022-05-04ParaView: let paraview build its own verdict tpl (#30332)Ethan Stam1-0/+3
2022-05-04mesa@22: gallium-xlib -> xlib (#30465)eugeneswalker1-1/+4
2022-05-03Vacuumms 1.1.1 (#30458)Frank Willmore1-6/+21
* adding updated package for vacuumms * deprecating old version * add link to DOI * style: trailing whitespace * Update var/spack/repos/builtin/packages/vacuumms/package.py Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com> Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2022-05-03flcl: add new versions (#30363)Richard Berger1-6/+12
* flcl: add new versions * Update var/spack/repos/builtin/packages/flcl/package.py Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com> * Update var/spack/repos/builtin/packages/flcl/package.py Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2022-05-03Metall Package: add v0.20 (#30446)Keita Iwabuchi1-1/+2
* Metall package: add dependency to GCC for build test * Package Metall: add v.017 * Package Metall: update the package file * Update var/spack/repos/builtin/packages/metall/package.py Co-authored-by: Bernhard Kaindl <43588962+bernhardkaindl@users.noreply.github.com> * Metall package: add v0.18 and v0.19 * Metall Package: add v0.20 Co-authored-by: Bernhard Kaindl <43588962+bernhardkaindl@users.noreply.github.com>
2022-05-03tamaas: new package (#30449)Lucas Frérot1-0/+75
* tamaas: added new package * tamaas: passing dependency prefixes to build * tamaas: Python 3.7 dependency * tamaas: compiler conflicts and correct ~python * tamaas: no newline in docstring * tamaas: correct python build dep. when ~python
2022-05-03py-matplotlib: add v3.5.2 (#30459)Adam J. Stewart1-0/+1
2022-05-03mpich: add datatype engine variant (#30257)Ken Raffenetti1-1/+23
Starting with MPICH 3.4, we offer different datatype engine options (dataloop or yaksa). The default is 'auto', which will choose based on the device configuration. Starting with MPICH 4.0, building against an external yaksa library is supported. Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
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