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2023-03-10ci: version bump for ghcr.io/spack/e4s-amazonlinux-2 (#35976)Zack Galbreath2-2/+20
* ci: version bump for ghcr.io/spack/e4s-amazonlinux-2 This new image comes with GnuPG v2.4.0 * py-cython: upperbounds for Python versions * fix py-gevent nonsense --------- Co-authored-by: Harmen Stoppels <me@harmenstoppels.nl>
2023-03-10feh: add v3.9.1 (#35858)Alec Scott1-0/+1
2023-03-10Add packages OSPRay, rkcommon, Open VKL, and Open Image Denoise (#35530)kwryankrattiger5-1/+186
2023-03-10Update yaFyaml, pFlogger, and gFTL versions, add list_url (#35968)Matthew Thompson5-0/+9
* Update yaFyaml, pFlogger, and gFTL versions * Add list_url
2023-03-10py-deap: newer version can use newer setuptools (#35986)Erik Heeren1-1/+3
* py-deap: newer version can use newer setuptools * Update var/spack/repos/builtin/packages/py-deap/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-03-10scons: add version 4.5.1. (#35990)H. Joe Lee1-1/+2
2023-03-10py-scikit-learn: add v1.2.2 (#35982)Adam J. Stewart1-1/+3
2023-03-10rivet: remove tag (deleted by upstream developers) (#35971)Valentin Volkl1-1/+0
2023-03-10spectre: add v2023.03.09 (#35972)SXS Bot1-0/+3
Co-authored-by: sxs-bot <sxs-bot@users.noreply.github.com>
2023-03-10cgns: enable tools (#35713)nicolas le goff2-1/+72
2023-03-09QMCPACK v3.16.0 (#35967)Paul R. C. Kent1-0/+2
2023-03-09scalasca: add 2.6.1 (#35970)Michael Kuhn1-5/+11
2023-03-09[liburing] Adds liburing package (#35762)Matthieu Dorier1-0/+24
* [liburing] Adds liburing package * Update var/spack/repos/builtin/packages/liburing/package.py * [liburing] Added conflicts for darwin and windows platforms --------- Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2023-03-09Automated deployment to update package flux-core 2023-03-09 (#35956)Vanessasaurus1-0/+1
Co-authored-by: github-actions <github-actions@users.noreply.github.com>
2023-03-09scorep: fix dependencies (#35966)Michael Kuhn1-5/+6
The overlapping dependency version ranges caused the concretizer to pick version 7.1 even though version 8.0 is available: ``` ==> Error: No version for 'cubelib' satisfies '@4.7.1' and '@4.8' ``` Moreover, Score-P 8.0 requires libbfd: ``` configure: error: bfd.h required ```
2023-03-09bdftopcf: add v1.1 (#35845)Alec Scott1-0/+1
2023-03-09Deprecate elpa rc2 (#35953)Rocco Meli1-0/+1
2023-03-09fontconfig: add v2.14.2 (#35861)Alec Scott1-0/+1
2023-03-09hpctoolkit: adjust dependency and conflict for xz (#35950)Mark W. Krentel1-1/+2
Hpctoolkit doesn't build cleanly with xz 5.2.7 and 5.2.8 due to a misuse of the symver attribute. This is now fixed in 5.2.9 and later.
2023-03-09New packages: py-fireworks, py-flask-paginate (#35939)Benjamin Meyers2-0/+56
* New packages: py-fireworks, py-flask-paginate * [@spackbot] updating style on behalf of meyersbs
2023-03-09New package py-custodian (#35938)Benjamin Meyers1-0/+27
* New package py-custodian * [@spackbot] updating style on behalf of meyersbs
2023-03-09Update py-boltons (#35937)Benjamin Meyers1-0/+1
2023-03-08gawk: add v5.2.1 (#35863)Alec Scott1-0/+1
2023-03-08git: add 2.39.2 (#35911)Michael Kuhn1-0/+2
2023-03-08libuv-julia: fix mtime again (#35945)Michael Kuhn1-5/+12
On some systems touch runs out of order, so set a equal mtimes to the relevant files
2023-03-08gcc: Patch building of GCC 5.1-12.1 with glibc >= 2.36 (#35798)Maciej Wójcik3-0/+59
2023-03-08Halide: Add 15.0.0 (#35924)Teo1-6/+6
2023-03-08nek5000/nekcem: test_install -> check_install (#35925)Tamara Dahlgren2-2/+2
2023-03-08Add pika 0.13.0 and pika-algorithms 0.1.2 (#35933)Auriane R2-0/+3
* Add last release of pika-algorithms + version constraint * Add pika release 0.13.0
2023-03-08p7zip: update checksum for 17.05 (#35923)Michael Kuhn1-1/+1
See https://github.com/p7zip-project/p7zip/issues/220
2023-03-08rmgdft: add version 5.0.5 (#35922)Emil Briggs1-0/+1
* Updated for version 5.0.5.
2023-03-08amrex: add v23.03 (#35765)Weiqun Zhang1-4/+6
2023-03-08intel-mpi-benchmarks: variant and conflicts fixes (#35670)Jean-Baptiste Besnard1-18/+28
2023-03-08Provide openmp from rocm-open-extras when tensile uses openmp (#35767)renjithravindrankannath2-3/+35
* Provide openmp from rocm-open-extras when tensile uses openmp * Correcting audit check failure in rocm-openmp-extras dependency * Fixing style check error * rocm-openmp-extras required instead of llvm-amdgpu both varient
2023-03-08qwt: lift restrictions on qt version and added an opengl variant and VisIt ↵nicolas le goff3-2/+21
use (#35734)
2023-03-08gdb: version 13.1 and debuginfod support (#35769)Robert Underwood1-16/+12
* gdb: version 13.1 and debuginfod * gdb: update to autotools helpers --------- Co-authored-by: Robert Underwood <runderwood@anl.gov>
2023-03-08new py-thop package (#35889)Sangu Mbekelu1-0/+22
* "new py-thop package" * [@spackbot] updating style on behalf of Sangu-Mbekelu * Update package.py modified the url and dependencies --------- Co-authored-by: Sangu Mbekelu <s.mbekelu9@gmail.com>
2023-03-08py-openmesh: new package (#35907)Erik Heeren1-0/+25
* py-openmesh: new package * Update var/spack/repos/builtin/packages/py-openmesh/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-03-08mfem: add missing cublas for cuda support (#35608)Aaron Black1-1/+1
2023-03-08py-parse-type: new package (#35909)Erik Heeren1-0/+18
2023-03-08parallelio: new version (#35553)Gerhard Theurich1-0/+1
2023-03-08newly released 0.8.3 (#35910)Alberto Invernizzi1-0/+1
2023-03-08Split `satisfies(..., strict=True/False)` into two functions (#35681)Massimiliano Culpo6-7/+25
This commit formalizes `satisfies(lhs, rhs, strict=True/False)` and splits it into two functions: `satisfies(lhs, rhs)` and `intersects(lhs, rhs)`. - `satisfies(lhs, rhs)` means: all concrete specs matching the left hand side also match the right hand side - `intersects(lhs, rhs)` means: there exist concrete specs matching both lhs and rhs. `intersects` now has the property that it's commutative, which previously was not guaranteed. For abstract specs, `intersects(lhs, rhs)` implies that `constrain(lhs, rhs)` works. What's *not* done in this PR is ensuring that `intersects(concrete, abstract)` returns false when the abstract spec has additional properties not present in the concrete spec, but `constrain(concrete, abstract)` will raise an error. To accomplish this, some semantics have changed, as well as bugfixes to ArchSpec: - GitVersion is now interpreted as a more constrained version - Compiler flags are interpreted as strings since their order is important - Abstract specs respect variant type (bool / multivalued)
2023-03-08New package: py-imbalanced-learn (#35895)Benjamin Meyers1-0/+37
* New package: py-imbalanced-learn * Fix typo * [@spackbot] updating style on behalf of meyersbs * Update var/spack/repos/builtin/packages/py-imbalanced-learn/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-03-08bump elpa (#35908)Rocco Meli1-0/+3
2023-03-08Update and fix py-meldmd (#35783)Benjamin Meyers2-6/+80
* Update/fix py-meldmd; update openmm * Restrict filter_file based on openmm version * Updates based on Adam's feedback * [@spackbot] updating style on behalf of meyersbs * Break up long filter_file Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-03-08Update py-seaborn to @0.12.2 (#35896)Benjamin Meyers1-0/+4
2023-03-08gromacs: add sve variant on aarch64 (#35614)Annop Wongwathanarat1-0/+11
2023-03-08ESMF should use Spack wrappers directly (#35749)Brian Vanderwende1-2/+2
2023-03-08singularity-eos: (#35625)QuellynSnead1-0/+10
The Cray fortran compiler names fortran modules in uppercase by default. Compile with the "-ef" flag to produce the lowercase name that singularity-eos is expecting.