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2024-02-29vtk: Update proj dependency (#42797)Chris Marsh1-1/+1
* Update proj dependency to enable newer proj usage * Allow for any proj version
2024-02-29libevent: remove autotools build deps again (#42908)Harmen Stoppels1-7/+0
The deps were added in #40945 to make it work on macOS 11, because the old configure scripts only detect macOS 10. Apparently people reported the autoreconf script caused issues, later fixed in #41057. However, also with that fix, things are incorrect, cause people now report: ``` libtool: You should recreate aclocal.m4 with macros from libtool 2.4.7 libtool: and run autoconf again. ``` HOWEVER, all this is unnecessary, because the underlying issue was already fixed long ago, it's just that it regressed at some point, but it's back in place since #41205.
2024-02-29ginkgo: add PAPI SDE support (#39425)Terry Cojean1-2/+5
Signed-off-by: Terry Cojean <terry.cojean@kit.edu> Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-02-28perl-readonly-xs: new package (#42897)Arne Becker1-0/+25
This adds Readonly::XS. Since this module can not be used by itself, the Spack package comes with a test override. This anticipates that the perl builder will one day have a generic standalone module usage test.
2024-02-28perl-test-json, perl-json-any: New packages (#42896)Arne Becker2-0/+63
* perl-test-json: New package Adds Test::JSON * Adds perl-json-any
2024-02-28perl-test-xpath: New package (#42895)Arne Becker1-0/+30
Adds Test::XPath
2024-02-28perl-uri-find: New package (#42894)Arne Becker1-0/+30
Adds URI::Find
2024-02-28perl-net-cidr-lite: new package (#42898)Arne Becker1-0/+27
* perl-net-cidr-lite: new package Adds Net::CIDR::Lite * Add license
2024-02-28perl-mojolicious: new package (#42899)Arne Becker1-0/+29
Adds Mojolicious
2024-02-28perl-cache-memcached and deps: new packages (#42911)Arne Becker2-0/+54
Adds Cache::Memcached and its dependencies. Installed OK with build-time tests. Added dependencies: - Cache::Memcached
2024-02-28mysql: explicity cast python command to str in _fix_dtrace_shebang() (#40781)Tom Payerle1-1/+1
This should fix issue #40780 We explicitly cast self.spec["python"].command to str in the filter_file call in _fix_dtrace_shebang to avoid the error ==> Error: TypeError: expected str, bytes or os.PathLike object, not Executable Not sure why the error is appearing (is it only for specific python versions, etc?), but the fix should be quite safe.
2024-02-28bison: remove unnessisary deps, add variant for colored output (#42209)Alec Scott1-4/+4
2024-02-28perl-yaml-syck: New package (#42892)Arne Becker1-0/+29
Adds YAML::Syck
2024-02-28perl-catalyst-runtime and deps: new packages (#42886)Arne Becker37-0/+1209
* perl-catalyst-runtime and deps: new packages This add Perl Catalyst::Runtime and its missing dependencies. Adds: - perl-catalyst-runtime - perl-apache-logformat-compiler - perl-cgi-simple - perl-cgi-struct - perl-class-c3-adopt-next - perl-cookie-baker - perl-data-dump - perl-devel-stacktrace-ashtml - perl-filesys-notify-simple - perl-getopt-long-descriptive - perl-hash-multivalue - perl-http-body - perl-http-entity-parser - perl-http-headers-fast - perl-http-multipartparser - perl-moosex-emulate-class-accessor-fast - perl-moosex-getopt - perl-moosex-methodattributes - perl-moosex-role-parameterized - perl-path-class - perl-plack - perl-plack-middleware-fixmissingbodyinredirect - perl-plack-middleware-methodoverride - perl-plack-middleware-removeredundantbody - perl-plack-middleware-reverseproxy - perl-plack-test-externalserver - perl-posix-strftime-compiler - perl-stream-buffered - perl-string-rewriteprefix - perl-test-mocktime - perl-test-tcp - perl-test-time - perl-test-trap - perl-tree-simple - perl-tree-simple-visitorfactory - perl-uri-ws - perl-www-form-urlencoded
2024-02-28AOCC: add v4.2.0 (#42891)AMD Toolchain Support1-1/+5
Co-authored-by: vijay kallesh <Vijay-teekinavar.Kallesh@amd.com>
2024-02-28Upgrade TensorFlow Probability with newer versions (#42673)Jonas Eschle1-9/+40
* enh: add newer versions * enh: add newer versions * format * fix typo * Update package.py * make jax and TF optional dependencies * style fix * remove dependency * remove old TFP version * fix: style
2024-02-28ParaView Release Candidate 5.12.0-RC3 (#42654)kwryankrattiger1-1/+1
2024-02-28perl-json-xsand deps: new packages (#42904)Arne Becker3-0/+84
Adds JSON::XS and its deps: - Canary::Stability - Types::Serialiser
2024-02-28package_py_systemd_python_improve (#42865)Sinan1-0/+3
Co-authored-by: sbulut <sbulut@3vgeomatics.com>
2024-02-28Add package zfit interface (#42666)Jonas Eschle1-0/+29
* Add package zfit interface * add maintainer * [@spackbot] updating style on behalf of jonas-eschle * Update package.py * Update package.py * Update package.py * [@spackbot] updating style on behalf of jonas-eschle * Update var/spack/repos/builtin/packages/py-zfit-interface/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update package.py --------- Co-authored-by: jonas-eschle <jonas-eschle@users.noreply.github.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2024-02-27C-Blosc2: Fuzzer Tests (#42881)Axel Huebl1-0/+1
The fuzzer tests are a bit flaky and have linker issues on clang. We generally only should build them in testing.
2024-02-27Adding dependency of roctracer-dev and patch in miopen-hip (#42637)renjithravindrankannath3-2/+47
2024-02-27openexr: Add custom libs property (#42274)Tom Payerle1-0/+11
Libraries for openexr are named libOpenEXR*.so, etc., so the default libs handler in spec does not find them. Add a custom libs property to address this. Partial fix for #42273 Co-authored-by: payerle <payerle@users.noreply.github.com>
2024-02-27regtools: add new package (#42852)George Young1-0/+22
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
2024-02-27btop: add cmake version restriction (#42835)YI Zeping1-0/+2
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-02-27bazel: allow offline build of major versions 5 and 6 (#41575)Lydéric Debusschère1-6/+51
* bazel: allow offline build of major versions 5 and 6; add variant download_data * bazel: add maintainer LydDeb * bazel: install offline only; remove variant download_data * bazel: fix variable name: resource_dico --> resource_dictionary * bazel: fix style * bazel: fix the build of version 4 * bazel: add comment about resources * bazel: access to resource stages with self.stage * bazel: add except to solve AttributeError: 'Stage' object has no attribute 'resource' --------- Co-authored-by: LydDeb <lyderic.debusschere@eolen.com>
2024-02-27delphes: use the same C++ standard as in ROOT (#42816)Juan Miguel Carceller1-12/+2
Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2024-02-27garfieldpp: Add version 5.0 (#42817)Juan Miguel Carceller1-0/+1
Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2024-02-27Open MPI: adjust pmix dependency for 5.0.x (#42827)Howard Pritchard1-1/+1
for various reasons had to advance dependency of 5.0.2 to at least pmix 4.2.4. 5.0.1 and 5.0.0 can also build with 4.2.4 pmix or newer. related to #42651 Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2024-02-27openfoam: add mpfr search paths (#42779)AMD Toolchain Support1-0/+2
Co-authored-by: Branden Moore <branden.moore@amd.com>
2024-02-27eigenexa: add 2.7–2.12 (#38170)Eisuke Kawashima1-3/+24
2024-02-27gpuscout: new package (#42761)stepanvanecek1-0/+28
Co-authored-by: Stepan Vanecek <stepan@Stepans-MBP.fritz.box>
2024-02-27double-batched: add v0.5.0 (#42850)Carsten Uphoff1-0/+1
Signed-off-by: Carsten Uphoff <carsten.uphoff@intel.com>
2024-02-27dd4hep: new version 1.28 (#42846)Wouter Deconinck1-0/+1
2024-02-27root: add dependent package required for build time tests (#42849)Kensuke WATANABE1-0/+2
2024-02-27bdsim: use the same C++ standard as in ROOT, add a patch (#42031)Juan Miguel Carceller2-1/+23
Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2024-02-27picard: add version 3.1.1 (#42862)downloadico1-0/+5
2024-02-27rocm-gdb: add v6.0.2 (#42855)afzpatel1-2/+4
2024-02-26Update camp missing headers patch to be applied with all compilers (#42857)Mikael Simberg2-1/+1
2024-02-26py-find-libpython: 0.3.1 (#42853)Erik Heeren1-1/+3
* py-find-libpython: 0.3.1 * py-find-libpython: sort versions
2024-02-26ImageMagick: fewer dependencies on macOS (#42739)Adam J. Stewart1-2/+2
2024-02-26py-pyomo: add v6.7.1 (#42795)Miranda Mundt1-4/+14
* Update Pyomo spack package for 6.7.1 release * Apply changes from @adamjstewart * Update sphinx+Pyomo versions * Whoops - typo
2024-02-25Update PyTorch ecosystem (#42819)Adam J. Stewart4-98/+108
2024-02-25py-ipyvuetify: new package (#42836)Jeremy Fix1-0/+30
* py-ipyvuetify: new package * Limit py-jupyter-packing version to 0.7.x Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Fix py-jupyterlab version and type Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Fix py-ipyvue version range to exclude 2 Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * rm py-wheel, already considered for PythonPackage * fix: pynpm only required for build, reorder dependencies as in the pyproject.toml --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2024-02-25snakemake: new version with plugins (#42713)Maciej Wójcik25-20/+653
* snakemake: add Snakemake 8 with dependencies * snakemake: add missing description * Whitespace * Whitespace * Whitespace * Whitespace * py-conda-inject: add constraint for Python Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * py-snakemake-executor-plugin-azure-batch: add constraint for Python Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * py-snakemake-executor-plugin-cluster-generic: add constraint for Python Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * py-snakemake: add upper bound for Python * py-snakemake-executor-plugin-drmaa: specify dependency type Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * py-snakemake-executor-plugin-googlebatch: correct dependency version Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * py-snakemake-executor-plugin-tes: correct dependency version Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * py-snakemake-storage-plugin-s3: reorder * snakemake: remove newly added variants * snakemake: remove newly added variants * snakemake: remove newly added variant * snakemake: update version * snakemake: update version * snakemake: whitespace * py-snakemake-storage-plugin-s3: update version * snakemake: use newer version * snakemake: whitespace * snakemake: update interfaces * py-snakemake-storage-plugin-gcs: link issue * snakemake: update versions --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2024-02-24[laghos] Add a patch for MPI_Session (#42841)Veselin Dobrev1-0/+7
2024-02-24zoxide: new package (#42840)Pranav Sivaraman1-0/+22
* feat: zoxide package * Apply suggestions from code review Co-authored-by: Alec Scott <alec@bcs.sh> --------- Co-authored-by: Alec Scott <alec@bcs.sh>
2024-02-24py-lightly: add v1.5.0 (#42820)Adam J. Stewart1-0/+1
2024-02-24py-pandas: add v2.2.1 (#42838)Adam J. Stewart1-0/+1
2024-02-24py-azure-...: add new versions (#42742)Maciej Wójcik4-34/+68
* py-azure-core: add new versions * py-azure-identity: add new versions, flatten dependencies * py-azure-storage-blob: add new versions * py-msal: add new versions * py-azure-...: black is terrible * py-azure-storage-blob: correct dependency * Reorder * Reorder
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