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2020-09-03Add new MavenPackage build system base class (#18185)Adam J. Stewart23-209/+54
* Add new MavenPackage build system base class * Fix flake8 and doc tests * More specific regex * Java 8 required for these packages
2020-09-03install/install_tree: glob support (#18376)Adam J. Stewart46-309/+79
* install/install_tree: glob support * Add unit tests * Update existing packages * Raise error if glob finds no files, document function raises
2020-09-03Pillow-SIMD: use as default PIL provider (#18097)Adam J. Stewart18-47/+82
* Pillow-SIMD: use as default PIL provider * Fix concretization of pil * Fix build of older versions of pillow
2020-09-03freetype: Add custom headers property (#18440)Michael Kuhn4-6/+13
freetype's headers are installed in the `freetype2` subdirectory, use a custom headers property to fix this in dependent packages.
2020-09-03fermi: added patch to support aarch64 (#18479)t-nojiri2-0/+14
2020-09-02Add test tolerance variant to nalu-wind pkg (#18455)psakievich1-0/+13
* Add test tolerance variant to nalu-wind pkg * flake8 fixes
2020-09-02eospac: add version 6.4.1 (#18476)Gabriel Rockefeller1-1/+3
2020-09-02new package: corenlp (#18467)Andrew W Elble2-0/+70
* new package: corenlp * import os, not os.path
2020-09-02CUDA_HOME needs to be set, or CUDA is found based on user's PATH. (#18475)Robert Blake1-0/+1
2020-09-02Add rocm 3.7.0 libs (#18366)Harmen Stoppels18-46/+212
* Add rocm 3.7.0 libs * Make 3.7.0-only dependency on numactl explicit * Add rocm-device-libs dep to rocm-clang-ocl * Update the cmakelists dir in rocm-debug-agant * Make rocm-debug-agent work on 3.7.0 * Disable tensile host; following rocm-arch recommendations
2020-09-02Add new RubyPackage build system base class (#18199)Adam J. Stewart20-101/+222
* Add new RubyPackage build system base class * Ruby: add spack external find support * Add build tests for RubyPackage
2020-09-02mfem: fix transitive hdf5 static libs (#18457)Chris White2-2/+10
2020-09-02python: switch to +uuid by default (#18252)Adam J. Stewart1-1/+1
2020-09-02New patch release SLEPc 3.13.4 (#18466)Jose E. Roman1-0/+1
2020-09-02Aria2: Add version 1.35.0. (#18465)Rémi Lacroix1-1/+2
2020-09-02Packages: headers should be lists (#18445)Adam J. Stewart3-3/+3
2020-09-02ldak: new package at 5.1 (#18431)Nick Booher1-0/+42
* ldak: new package at 5.1 * flake8 * Re-run tests * Apply suggestions from code review Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-09-02Add HPX 1.5.0 release and update the homepage (#18464)Auriane R1-1/+2
2020-09-02new package: py-python-fmask (#18382)Sinan1-0/+22
* new package: py-python-fmask * flake8 * add missing dependency Co-authored-by: sbulut <sbulut@3vgeomatics.com> Co-authored-by: Sinan81 <Sinan81@earth>
2020-09-02new package: py-gitdb (#18386)Sinan1-0/+20
* new package: py-gitdb * Update var/spack/repos/builtin/packages/py-gitdb/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update package.py Co-authored-by: sbulut <sbulut@3vgeomatics.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-09-02Add blaze versions 3.6-3.8 (#18424)Jordan Moxon1-1/+4
2020-09-02Add new package: rasdaemon (#18434)darmac1-0/+30
2020-09-02gromacs: add support for opencl build (#18461)Gvozden Neskovic1-3/+9
Co-authored-by: Gvozden Nešković <neskovic@dev06.compeng.uni-frankfurt.de>
2020-09-02Flibcpp: update version (#18448)Seth R. Johnson1-14/+19
Update available versions and add Fortran check
2020-09-02Updated Hugo package. (#18443)Paul1-0/+13
* Set GOPATH in build environment to avoid creating files in the user's default GOPATH (e.g. ~/go). * Support for external find. * Added latest releease 0.74.3.
2020-09-02r-boot: checksum mismatch @1.3-23 (#18458)ketsubouchi1-1/+1
2020-09-02Add gdb TUI variant (#18459)Weston Ortiz1-0/+5
2020-09-02scotch: update to 6.0.10 (released 31-AUG-2020) (#18462)Mark Olesen1-1/+3
- added gitlab location, updated the homepage location Co-authored-by: Mark Olesen <Mark.Olesen@esi-group.com>
2020-09-02New package: ForTrilinos (#18456)Seth R. Johnson2-10/+63
Remove prior built-in Trilinos subrepository. Added a Trilinos conflict discovered while documenting ForTrilinos: ``` *** *** ERROR: Setting Trilinos_ENABLE_SEACASExodus=OFF which was 'ON' because SEACASExodus has a required library dependence on disabled TPL Netcdf! *** ```
2020-09-01ADIOS: Fix no-MPI Build (#18453)Axel Huebl1-1/+1
Do not apply this patch in no-MPI builds. I think this autotools check logic is generally borked, this will just set it manually to on/off now.
2020-09-01ccs-qcd: Change compile option for aarch64 (#17516)t-nojiri1-7/+17
* ccs-qcd: Change compile option for aarch64
2020-09-01Jali: Fix bugs in CMake section (#18447)Rao Garimella1-8/+4
Fix variant name and cmake variable. Co-authored-by: Rao Garimella <rao@abyzou.lanl.gov>
2020-09-01Update dependencies: py-torch-geometric (#18265)Jen Herting1-0/+23
* [py-torch-geometric] depends on py-torch-sparse * [py-torch-geometric] setting TORCH_CUDA_ARCH_LIST * [py-torch-geometric] added the rest of the dependencies * [py-torch-geometric] added cuda variant and added more build env vars * [py-torch-geometric] added variant info for depenedencies * [py-torch-geometric] flake8 * [py-torch-geometric] add variant description
2020-09-01Add new package: efivar (#18392)darmac1-0/+28
2020-09-01Added HPC Challenge Benchmark (#18323)Nikolay Simakov1-0/+207
* HPCC Benchmark: added HPC Challenge (HPCC) benchmark * HPCC Benchmark: modified error message on lack of fftw2 interface in MKL * hpcc: fixed styling add one more installation example * hpcc: styling fix Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * hpcc: changed include and lib location setter Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * hpcc: fixed styling add one more installation example * hpcc: removed readme.md * hpcc: develop repo now is in github * hpcc: march arguments are set explicitly in case of intel compilers, added -restrict flag, which needed for older intel compilers (at least <=19.0.5.281) Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-09-01orbit2: new package at v2.14.19 (#18405)ketsubouchi1-0/+20
2020-09-01fuse-overlayfs: added new package at v1.1.2 (#18435)darmac1-0/+23
2020-09-01ocaml: allow v4.08 and v4.09 to build with gcc10 (#18254)Joseph Wang2-0/+42
fixes #18228. This patch doesn't cover all old versions but it allows packages like whizard to build.
2020-09-01py-tpot: added new package at v0.11.5 (#18385)Sinan1-0/+31
Co-authored-by: sbulut <sbulut@3vgeomatics.com> Co-authored-by: Sinan81 <Sinan81@earth> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-09-01environment-modules: added v4.5.3 (#18425)Xavier Delaruelle1-1/+2
2020-09-01dihydrogen, hydrogen: dependency on CUB is conditional on CUDA version (#18427)Brian Van Essen2-2/+2
In CUDA 11, CUB is integrated into the CUDA library.
2020-09-01elfutils: add support for debuginfod (#18227)Tim Haines1-3/+15
2020-09-01py-llvmlite: added v0.34 (#18432)Jeffrey Salmond1-1/+3
2020-09-01openfoam: delete print to screen and updated docstrings/comments (#17985)Toyohisa Kameyama1-7/+7
2020-09-01libpam: added new package at v1.0.9 (#18418)darmac1-0/+28
2020-08-31new package: wrf (#18398)MichaelLaufer16-0/+677
* wrf: new package * wrf: fix install dir * wrf: ndown location * Add more compiler and nesting options to wrf package * Fix configure that didn't find pgf90, use tempfile and compile in parallel * WRF v4.2 with parallel I/O support through pnetcdf Signed-off-by: michael laufer <michael.laufer@toganetworks.com> * extend Package, compiler wrapper now used, small fixes Signed-off-by: michael laufer <michael.laufer@toganetworks.com> * Update var/spack/repos/builtin/packages/wrf/package.py fixed typo Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Levi Baber <baberlevi@gmail.com> Co-authored-by: eXact lab <info@exact-lab.it> Co-authored-by: michael laufer <michael.laufer@toganetworks.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-08-31OPENMPI: add 4.0.5 (#18332)Howard Pritchard1-2/+3
Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2020-08-31Update package.py (#18426)Julien Loiseau1-1/+1
Correct boost version to match flecsi
2020-08-31new package: py-update-checker (#18396)Sinan1-0/+22
* new package: py-update-checker * add test deps * Update var/spack/repos/builtin/packages/py-update-checker/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-update-checker/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-update-checker/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * remove lint stuff. Co-authored-by: Sinan81 <Sinan81@earth> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-08-31New package: py-torch-sparse (#18270)Jen Herting1-0/+38
* [py-torch-sparse] created template * [py-torch-sparse] added dependencies * [py-torch-sparse] extends py-torch-scatter * [py-torch-sparse] added variant cuda and setting env vars * [py-torch-sparse] added homepage and description. removed fixmes * [py-torch-sparse] flake8 * [py-torch-sparse] added variant description * [py-torch-sparse] extends -> depends on * [py-torch-sparse] added dependencies of py-setuptools and py-pytest-runner
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