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2023-12-11[protobuf] New versions, explicit cxxstd variant (#41459)Chris Green1-5/+32
* [protobuf] New versions, explicit cxxstd variant * New versions 3.15.8, 3.25.0, 3.25.1. * New explicit variant `cxxstd` with support for older Protobuf versions. * Support testing. * Use Protobuf's `protobuf_BUILD_SHARED_LIBS` instead of `BUILD_SHARED_LIBS`. * Support building with LLVM/Clang's `libc++`. * Address audit issue * Variant default does not honor `when` clause * Use `self.spec.satisfies()` instead of `with when()` * Fix silliness; improve consistency * Today was apparently a go-back-to-bed day
2023-12-11Bump up the version for ROCm-5.7.0 and ROCm-5.7.1 releases. (#40724)Sreenivasa Murthy Kolam55-60/+1911
* initial commit for rocm-5.7.0 and 5.7.1 releases * bump up ther version for 5.7.0 and 5.7.1 releases * update recipes to support 5.7.0 and 5.7.1 releases * bump up the version for ROCm 5.7.0 and ROCm-5.7.1 releases * bump up the version for composable-kernel amd miopen-hip * fix style errors * fix style errors in hip etc * renaming composable-kernel recipe * changes for composable_kernel * Revert "renaming composable-kernel recipe" This reverts commit 0cf6c6debfc7b12014f514af26144132ae187e71. * Revert "changes for composable_kernel" This reverts commit 05272a10a79cc14dc9c1afbda8fa4de87ea672ad. * bump up the version for hiprand * using the checksum for hiprand-5.7.1 * bump up the version for 5.7.0 and 5.7.1 releases * fix style errors * fix merge conflicts with the develop. * temp workaround for the error seen with rocm-5.7.0 when trying to generate the dependency file for runtime/legion/legion_redop.cu * fix build issue(work around) with legion * add patch for migraphx package to turn off ck * update to hip recipe * fix hip-path detection inside llvm clang driver * update llvm-amdgpu and rocm-validation-suite recipes * fix style errors * bump up the version for amdsmi for rocm-5.7.0 release * add support for gfx941,gfx942 for rocm-5.7.0 release onwards * revert changes to rocm.py file * added gfx941 and gfx942 to rocm.py and add the gfx942 to kokkos and new checksum the new version seem to support gfx942 * bump up the version for rccl for 5.7.1 * update the patch for rocm-openmp-extras for 5.7.0 * update mivisionx recipe for 5.7.0 release * add new dependencies for rocfft tests * port the fix for avx build, the start address of values_ buffer in KernelParameters is not correct as it is computed based on 16-byte alignment * set HIP_PATH=ROCM_PATH for 5.7.0 onwards * address review comments * revert adding xnack- and xnack+ to gfx940,gfx941,gfx942 as the prechecks were failing
2023-12-11[abseil-cpp] New version 20230802.1 (#41457)Chris Green1-0/+3
2023-12-11otf2: add v3.0.3 (#41499)wspear1-0/+1
* Add otf2 version 3.3 * Update var/spack/repos/builtin/packages/otf2/package.py --------- Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2023-12-11New package: perl-test-file (#41510)Arne Becker1-0/+20
2023-12-11perl-class-tiny: New package (#41513)Arne Becker1-0/+20
2023-12-11Add new version of feq-parse (#41515)Joe Schoonover1-0/+1
The new feq-parse version includes fixes for ifort and ifx compilers Additionally, evaluation of parser objects with multidimension arrays is now supported.
2023-12-11libfabric: Add ucx provider variant (#41524)Kyle Gerheiser1-0/+2
2023-12-11perl-test-nowarnings: New package (#41539)Arne Becker1-0/+20
* perl-test-nowarnings: New package * Add myself as maintainer
2023-12-11intel-oneapi-compilers 2024.0.1: added new version to packages (#41555)Andrey Perestoronin2-1/+12
* add new packages * fix version
2023-12-11perl-test-weaken: New package (#41540)Arne Becker1-0/+20
2023-12-11perl-test-without-module: New package (#41541)Arne Becker1-0/+18
2023-12-11samtools/htslib add latest version (#41545)James Beal2-0/+7
* samtools/htslib add latest version * Given I work at the same institute as the authors I think it fair I am willing to review changes, if it's complex I can ask them over tea. --------- Co-authored-by: James Beal <jb23@sanger.ac.uk>
2023-12-11igv add latest version (#41546)James Beal1-0/+1
Co-authored-by: James Beal <jb23@sanger.ac.uk>
2023-12-11perl-bio-db-hts: add new package with version 3.01 (#41554)Christopher Christofi1-0/+19
* perl-bio-db-hts: add new package with version 3.01 * fix styling
2023-12-11Add eckit@1.24.5, ecmwf-atlas@{0.35.0,0.35.1,0.36.0} (#41547)Dom Heinzeller2-0/+4
* Add eckit@1.24.5 * Add ecmwf-atlas@0.35.1 * Add ecmwf-atlas@0.36.0
2023-12-11Add @climbfuji to fms maintainers (#41550)Dom Heinzeller1-1/+1
2023-12-11apple-clang: add new package (#41485)Massimiliano Culpo2-0/+111
* apple-clang: added new package * Add a maintainer * Use f-strings, remove leftover comment
2023-12-11fabtests: Add versions and update maintainer (#41525)Kyle Gerheiser1-1/+34
2023-12-11Add v5.0.0 to SENSEI (#41551)Dan Lipsa1-0/+1
Co-authored-by: Dan Lipsa <dan.lipsa@savannah.khq.kitware.com>
2023-12-11Update for v0.7.2 (#41393)Garth N. Wells1-0/+3
2023-12-11[root] New variants, patches (#41548)Chris Green3-6/+137
* New variants: - `tmvz-cpu` - `tmvz-gpu` - `tmvz-pymva` - `tmvz-sofie` * Improve X-related dependencies. * Improve TMVA-related dependencies with more specificity. * Patch possible missing standard header include in Eve7. * Patch Protobuf handling to support new Protobuf-provided CMake config files required to handle transitive `abseil-cpp` dependence. * Add missing terminal newline to `webgui` patch to remove patch warning. * Handle deprecated/removed build options.
2023-12-11fpocket: improve recipe (#41532)Christopher Christofi1-2/+7
2023-12-11add cmake constraint (#41542)Rocco Meli1-0/+3
2023-12-11Revert "[root] New variants, checksum changes, sundry improvements (#41463)" ↵Patrick Gartung3-174/+8
(#41544) This reverts commit 7d45e132a669c54cc591fd2c019936c65868358d.
2023-12-11geant4/geant4-data: add v10.0.4 (#41478)Felix Werner9-5/+64
* geant4/geant4-data: add builtin_clhep variant and v10.0.4. * geant4: revert addition of builtin_clhep variant. * geant4: fix vecgeom variant only being available for v10.3 and above.
2023-12-11netlib-scalapack: add git attribute and master version (#41537)Rocco Meli1-0/+2
2023-12-11kyotocabinet: add new package (#41512)Arne Becker1-0/+20
2023-12-11tfel: fix v3.4.5 checksum (#41523)Thomas Helfer1-1/+1
2023-12-11fms: add v2023.04 (#41475)Alex Richert1-1/+1
2023-12-11PyTorch: disable sleef dep for now (#41508)Adam J. Stewart1-3/+5
2023-12-11Likwid: likwid-icx-mem-group-fix.patch only for 5.2.* versions (#41514)Thomas Gruber1-1/+1
2023-12-11leveldb: turning benchmark and tests off (#41518)Matthieu Dorier1-4/+5
2023-12-11petsc: improve hipsparse compat (#40311)Harmen Stoppels3-15/+127
Co-authored-by: Satish Balay <balay@mcs.anl.gov>
2023-12-11flux-core: add v0.57.0 (#41520)Vanessasaurus1-0/+1
Co-authored-by: github-actions <github-actions@users.noreply.github.com>
2023-12-11cdo: add v2.3.0 (#41479)Brian Spilner1-0/+5
2023-12-11vecgeom: Use correct checksum for version 1.2.5 (#41530)Thomas Madlener1-1/+1
See https://gitlab.cern.ch/VecGeom/VecGeom/-/releases/v1.2.5
2023-12-08celeritas: new version 0.4.1 (#41504)Seth R. Johnson1-6/+12
* celeritas: new version 0.4.1 * Mark correct versions as deprecated
2023-12-07flecsi: remove ^legion network=gasnet restriction (#41494)Richard Berger1-1/+0
2023-12-07cdt: Add versions 1.3.6 and 1.4.0 (#41490)Julien Cortial1-0/+2
2023-12-07py-mpldock: new package (#41316)Lydéric Debusschère1-0/+22
* py-mpldock: new package * py-mpldock: remove version constraint on python --------- Co-authored-by: LydDeb <lyderic.debusschere@eolen.com>
2023-12-07Bugfix spectrum-mpi module generation (#41466)Brian Van Essen1-2/+18
* Ensure that additional environment variables are set when a module file is generated. * Fixed the detection of the opal_prefix / MPI_ROOT field to use ompi_info. --------- Co-authored-by: Greg Becker <becker33@llnl.gov>
2023-12-07Update homepage URL, add 5.5.1 version, remove bad version hashes, and other ↵Vijay M1-11/+6
minro changes (#41492)
2023-12-07iqtree2: add new version 2.2.2.7 and new variant lsd2 (#41467)snehring1-0/+20
* iqtree2: add new version 2.2.2.7 and new variant lsd2 * iqtree2: reorder variant and resource
2023-12-07Update UFCx for v0.7.0. (#41392)Garth N. Wells1-0/+1
2023-12-07Permit shared-library for libbacktrace (#41454)Kyle Knoepfel1-0/+7
2023-12-07CMake: v3.26.6 (#41282)John W. Parent1-0/+1
2023-12-07opensta: add new package (#41484)Dave Keeshan1-0/+47
* Add opensta, is allows 2 variants, zlib and cudd, but they are both enabled by default * Remove unused import, os
2023-12-07Update pika package to use f-strings (#41483)Auriane R1-16/+6
2023-12-07py-keras: add v3.0.1 (#41486)Adam J. Stewart1-2/+5