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2016-06-20Merge pull request #1029 from adamjstewart/features/armadilloTodd Gamblin3-16/+145
Add Armadillo and SuperLU packages
2016-06-20Merge pull request #1076 from JRWynneIII/ferretTodd Gamblin1-0/+103
Added spec to build Ferret
2016-06-20Use non-checksummed PyPi download URLsAdam J. Stewart3-3/+3
2016-06-20Install examples for sundialsAdam J. Stewart2-5/+49
2016-06-20Filter compilers and link boost properlyAdam J. Stewart1-3/+51
2016-06-20Flake8Adam J. Stewart3-7/+6
2016-06-20Add scons support, .zip support, and Cantera packageAdam J. Stewart7-9/+505
2016-06-20Merge pull request #1083 from robertdfrench/tmux-2.2Todd Gamblin1-5/+12
Tmux 2.2
2016-06-20Tmux 2.2 with PEP8Robert.French1-5/+12
Tmux 2.2 Provide variant to skip utempter Remove utempter variant; 2.2 doesn't need it Flake8ify
2016-06-19New package portaErik Schnetter2-0/+66
2016-06-19New package polymakeErik Schnetter1-0/+55
2016-06-19Add header files to lrslib installErik Schnetter1-1/+4
2016-06-19Add missing header files to Bliss installErik Schnetter1-6/+17
2016-06-19Build Bliss both with and without GMPErik Schnetter1-7/+20
2016-06-19openmpi: raise an error without Fortran compilerDenis Davydov1-0/+7
2016-06-19openblas: raise an error without Fortran compilerDenis Davydov1-0/+7
2016-06-18New package cddlibErik Schnetter1-0/+46
2016-06-18New package "nauty and Traces"Erik Schnetter1-0/+83
2016-06-18New package PandaErik Schnetter1-0/+44
2016-06-18Add fourier tool to lrslibErik Schnetter1-16/+15
2016-06-18New package lrslibErik Schnetter2-0/+114
2016-06-18Update Bliss to use -O3Erik Schnetter1-3/+3
2016-06-18New package cddErik Schnetter2-0/+69
2016-06-18Update BlissErik Schnetter1-3/+4
2016-06-18Add Bliss packageErik Schnetter2-0/+86
2016-06-17Allow py-pillow to link to Spack-built librariesAdam J. Stewart1-50/+86
2016-06-17Merge pull request #1065 from epfl-scitas/packages/espresso_updateTodd Gamblin1-6/+18
espresso : update to 5.4.0
2016-06-17Merge pull request #1044 from adamjstewart/features/sncosmoTodd Gamblin9-101/+432
Add py-sncosmo package
2016-06-17Merge pull request #946 from LLNL/features/intel2Todd Gamblin5-0/+351
Intel software packages and license enhancements
2016-06-17Python flake8 overhaulAdam J. Stewart1-76/+114
2016-06-17Added working Ferret specRobert D. French1-0/+103
Fixed ferret spec. It builds now Made ferret spec more flake8-y Fixed homepage and info text about Ferret Removed vim swap file Reverted changes to netcdf-fortran spec and added netcdf~mpi dependency to ferret spec to compensate for it Fixed flake8 issues!
2016-06-17Fix activation of sites.py for sncosmoAdam J. Stewart4-8/+15
2016-06-17Add additional Astropy dependenciesAdam J. Stewart3-7/+89
2016-06-17Remove version constraintsAdam J. Stewart5-13/+9
2016-06-17Allow packages to buildAdam J. Stewart4-13/+9
2016-06-17Add py-sncosmo packageAdam J. Stewart6-22/+234
2016-06-16Add 'jdk' as a dependency.Glenn Johnson1-0/+1
Add jdk as a dependency so that R has support for java and allow packages that need java to work.
2016-06-16Add list_url for old versions.Glenn Johnson3-10/+12
2016-06-16Make install comment consistent with actual call.Glenn Johnson1-1/+1
2016-06-16Add validator for bioconductor packagesGlenn Johnson1-0/+13
This commit adds a validator function to make sure the versions of R and bioconductor are in sync.
2016-06-16Tweak how R packages are built.Glenn Johnson5-10/+14
Add bzip2 as a dependency to base R. Switch from installing the R packages from tar files to installing from the extracted directory. This is more in line with a standard install and also allows installing from VCS. Use the Bioconductor version for BiocGenerics and future Bioconductor packages. Suffix the package with 'bioc-$version' to indicate which Bioconductor release the package is a part of. This is actually more important than the actual version attached to individual packages although those are subject to change within the Bioconductor branch.
2016-06-16Fix flake8 errorsGlenn Johnson2-3/+4
Use Bioconductor provided Short URL for homepage in BiocGenerics. Wrap description text for utf variant in pcre.
2016-06-16Update version of BiocGenericsGlenn Johnson1-1/+1
The BioConductor repositories only keep the most recent version so this has to be bumped.
2016-06-16Use configure_args rather than optionsGlenn Johnson1-8/+8
Replaced 'options' with 'configure_args'. That seems like a better name and is consistent with the packaging guide.
2016-06-16Add variant for UTF support to pcreGlenn Johnson1-1/+9
This will build PCRE with UTF support by default. That seems to be reasonable for most environments.
2016-06-16Clean up R extensionsGlenn Johnson4-8/+16
Run the existing R extension packages through autopep8 to clean up.
2016-06-16Add version 3.3.0 of RGlenn Johnson1-0/+3
This commit adds the 3.3.0 version of R and adds dependencies on curl and pcre.
2016-06-16Clean up R package filesGlenn Johnson1-25/+19
- remove unused imports - apply pep8 - reformat text strings
2016-06-16Merge pull request #944 from adamjstewart/features/bertiniTodd Gamblin1-0/+50
Add bertini package
2016-06-16Merge pull request #962 from adamjstewart/features/hplTodd Gamblin1-0/+119
Add HPL benchmark package
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