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2022-08-14arpack-ng %oneapi: add -Wno-implicit-function-declaration (#32080)eugeneswalker1-0/+8
2022-08-14mpifileutils %oneapi: add -Wno-implicit-function-declaration (#32067)eugeneswalker1-0/+8
2022-08-14openblas@0.3.20 %openblas: -Wno-implicit-function-declaration (#32065)eugeneswalker1-0/+8
2022-08-14hdf5 flag_handler for icx: add -Wno-implicit-function-declaration (#32066)eugeneswalker1-2/+2
2022-08-14superlu-dist %oneapi: add -Wno-implicit-function-declaration (#32081)eugeneswalker1-0/+2
2022-08-14root: fix setup_dependent_build_environment regression (#32115)Wouter Deconinck1-1/+1
`setup_dependent_build_environment(self, env, dependent_spec)` does not have a variable `spec`. This causes several issues right now: ```console ==> Installing gaudi-36.6-cjjrpjwpcqrtojyrdqml3jpzkbn55hpb ==> No binary for gaudi-36.6-cjjrpjwpcqrtojyrdqml3jpzkbn55hpb found: installing from source ==> Error: NameError: name 'spec' is not defined /home/wdconinc/git/spack/var/spack/repos/builtin/packages/root/package.py:614, in setup_dependent_build_environment: 611 env.prepend_path("ROOT_INCLUDE_PATH", dependent_spec.prefix.include) 612 if "+rpath" not in self.spec: 613 env.prepend_path("LD_LIBRARY_PATH", self.prefix.lib.root) >> 614 if "platform=darwin" in spec: 615 # Newer deployment targets cause fatal errors in rootcling 616 env.unset("MACOSX_DEPLOYMENT_TARGET") ```
2022-08-13Add new dependencies for rocm variant for py-torch recipe (#32100)renjithravindrankannath1-1/+3
* Cmake module path updated for ROCm 5.2 * nccl is already set below for PyTorch 1.6+ * Threadpool is set below for PyTorch 1.6+
2022-08-12boost@1.76:1.79 %oneapi: patch according to Intel guide for building Boost ↵eugeneswalker2-1/+1
(#32097)
2022-08-12do not require docs (py-docutils) if not +docs (#32099)Vanessasaurus1-2/+2
Signed-off-by: vsoch <vsoch@users.noreply.github.com> Signed-off-by: vsoch <vsoch@users.noreply.github.com> Co-authored-by: vsoch <vsoch@users.noreply.github.com>
2022-08-12Use llvm13-thread.patch for all compilers when building llvm (#31661)Mikael Simberg2-1/+3
2022-08-12perl-fth: add v0.527 (#32032)Olivier Cessenat1-0/+1
2022-08-12keepassxc: add 'docs' variant (#32049)Olivier Cessenat1-5/+4
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2022-08-12rocm: add v5.2 for the entire stack (#31591)renjithravindrankannath56-156/+579
2022-08-11VTK-m: Constrain gcc compiler after 11 updates. (#32059)kwryankrattiger1-0/+1
2022-08-11Fix performance regression with `spack mirror create --all` (#32005)Massimiliano Culpo8-15/+15
This PR fixes the performance regression reported in #31985 and a few other issues found while refactoring the spack mirror create command. Modifications: * (Primary) Do not require concretization for `spack mirror create --all` * Forbid using --versions-per-spec together with --all * Fixed a few issues when reading specs from input file (specs were not concretized, command would fail when trying to mirror dependencies) * Fix issue with default directory for spack mirror create not being canonicalized * Add more unit tests to poke spack mirror create * Skip externals also when mirroring environments * Changed slightly the wording for reporting (it was mentioning "Successfully created" even in presence of errors) * Fix issue with colify (was not called properly during error reporting)
2022-08-11New package: py-pynndescent (#32076)Jen Herting1-0/+23
* [py-pynndescent] New package * [py-pynndescent] Removed white space * [py-pynndescent] fixed dependencies * [py-pynndescent] flake8 * [py-pynndescent] Import update Co-authored-by: James A Zilberman <jazrc@rit.edu>
2022-08-11petsc, py-petsc4py: add 3.17.4 (#32071)Satish Balay2-0/+2
2022-08-11aml: add v0.2, cuda,opencl,hip support (#30701)Swann Perarnau1-35/+97
- [x] Add release v0.2 of the AML package, deprecate v0.1, and add support for OpenCL, HIP, and CUDA variants of the library. Also update repo and release URL, as the previous one is not accessible anymore. - [x] aml: add oneapi-level-zero support - [x] Change openmp flags to force compatibility when compiling with intel-oneapi compilers.
2022-08-11pasta: updating to latest version (#32077)snehring1-2/+5
* pasta: updating to latest version * pasta: fixing missing 's' from maintainers
2022-08-11podio, edm4hep: new versions (#32063)Wouter Deconinck2-0/+3
* podio, edm4hep: new versions * edm4hep: new version * edm4hep: @0.6: depends_on podio@0.15:
2022-08-11release cdo-2.0.6 (#32069)Brian Spilner1-0/+5
2022-08-11pwgen: add new package (#32053)Olivier Cessenat1-0/+20
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2022-08-11hwloc: add v2.8.0 (#32042)Erik Schnetter1-0/+1
2022-08-11cmake: add v3.23.3 and v3.22.6 (#31926)Harmen Stoppels1-0/+2
2022-08-11Pin tbb version for salmon & dyninst (#32026)Robert Cohn3-10/+16
2022-08-11py-matplotlib: add v3.5.3 (#32051)Adam J. Stewart1-1/+2
2022-08-11py-tensorflow-estimator: new versions (#32029)Andrew W Elble1-0/+8
* py-tensorflow-estimator: new versions * [@spackbot] updating style on behalf of aweits Co-authored-by: aweits <aweits@users.noreply.github.com>
2022-08-11gxsview: gcc11 compilation rule for std::numeric_limits (#31970)Olivier Cessenat2-0/+12
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2022-08-11py-scipy: 1.4.0:1.4.1 conflict on ppc64le (#32050)Adam J. Stewart1-0/+3
2022-08-11bubblewrap: add v0.6.2 (#32055)Harmen Stoppels2-0/+2
2022-08-11precice: add v2.5.0 (#32052)David Schneider1-0/+1
2022-08-11Add support for using Spdlog in LBANN (#32034)Brian Van Essen1-0/+1
2022-08-11Updated the RDKit dependencies for Boost variants. (#32033)Brian Van Essen1-1/+1
2022-08-10bazel: add patches to compile with gcc-11 (#28548)Glenn Johnson5-3/+103
2022-08-10llvm: fix LLDB_ENABLE_[N]CURSES (#32006)Harmen Stoppels1-1/+1
2022-08-10Add LIKWID 5.2.2 (#32031)Thomas Gruber1-0/+1
2022-08-10VisIt: fix missing link libs patch for parallel. (#32018)Eric Brugger1-1/+1
2022-08-10intel-tbb add 2021.4, 2021.5, 2021.6.0-rc and master branch (#31997)Robert Cohn1-0/+8
2022-08-10singularity-eos: add dependency to py-pybind11 (#31907)Richard Berger1-0/+1
2022-08-10arm: add a dependency on "ncurses abi=5' (#31942)Filippo Spiga1-1/+3
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com> Co-authored-by: fspiga <fspiga@users.noreply.github.com>
2022-08-10gaudi: disentangle variant 'optional' (#31801)Wouter Deconinck1-29/+32
2022-08-10libgta: add new package (#31981)Adam J. Stewart2-2/+21
2022-08-10parallelio: update config (#31868)Jim Edwards1-11/+19
2022-08-10py-pytorch-lightning: add v1.7.1 (#32020)Adam J. Stewart1-0/+1
2022-08-10WarpX: add v22.08 (#31849)Axel Huebl2-0/+4
2022-08-10libjxl: add new package (#31983)Adam J. Stewart6-7/+114
2022-08-10ADIOS2: ZFP<1.0 (#32015)Axel Huebl1-1/+1
* ADIOS2: ZFP<1.0 The tagged ADIOS2 releases in Spack (and develop) do not yet work with ZFP 1.0. Express valid depedency range before someone updates the ZFP package and triggers the incompatibility. * Use semver
2022-08-09Add checksum for py-setuptools-rust 1.2.0 and 1.4.1 (#32009)iarspider1-1/+8
* Add checksum for py-setuptools-rust 1.2.0 and 1.4.1 * Update var/spack/repos/builtin/packages/py-setuptools-rust/package.py Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com> * Update package.py Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2022-08-09Add checksum for py-pynacl 1.5.0 (#31988)iarspider1-2/+4
* Add checksum for py-pynacl 1.5.0 * Update package.py
2022-08-09Add checksum for new py-semantic-version versions (#32010)iarspider1-0/+3
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