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2019-10-08perl-perlio-gzip: add zlib dependency. (#13060)Toyohisa Kameyama1-0/+6
2019-10-08psmc: add zlib dependency. (#13061)Toyohisa Kameyama1-0/+2
2019-10-08seqprep: add zlib dependency. (#13062)Toyohisa Kameyama1-0/+2
2019-10-08tabix: add zlib dependency. (#13064)Toyohisa Kameyama1-0/+1
2019-10-08Added py-certipy package. Dependency of py-jupyterhub. (#13068)wspear1-0/+19
* Added py-certipy package. Dependency of py-jupyterhub. * Changed url to pypi
2019-10-08QMCPACK Oct2019 fix buglets (#13069)Nichols A. Romero1-5/+11
* Support different CMake build types correctly. * LIBXML2 variables no longer used. * Fix E501 as part of https://github.com/spack/spack/pull/13069
2019-10-08Fixed hash of version .0.5 and added latest version (.0.7.1) (#13077)wspear1-2/+3
2019-10-08Build older openfoam (#13071)Mark Olesen2-19/+18
* adjust building of OpenFOAM 1806 and earlier - spack now unpacks into spack-src, but earlier OpenFOAM versions still expect particular directory names (eg, OpenFOAM-v1806). Resolve by creating a symlink during patching. * replace openfoam 1806 patch with URL version
2019-10-08Added py-pamela package. Dependency of py-jupyterhub. (#13075)wspear1-0/+17
2019-10-08Add headsup note re cryptsetup patch for v2.2.2 (#13076)George Hartzell1-0/+4
2019-10-08pmdk: added v 1.7 (#13067)Phil Carns1-0/+1
2019-10-07py-apipkg: Fix mix up of checksums (#13066)Oliver Breitwieser1-2/+2
Change-Id: Ibae329c5a6cf7e3741a879612da523e11e3b0ab9
2019-10-07watch: added new package (#13044)Adam J. Stewart1-0/+49
2019-10-06Added go 1.13.1 and 1.12.10 (#12977)Paul1-0/+2
2019-10-06gnuplot: add 5.2.7 and fix qt dep (#13058)Denis Davydov2-1/+3
2019-10-06freeimage: new package (#13049)Matthias Wolf2-0/+40
* freeimage: new package * Address comments. * Whitespace
2019-10-06unrar: Add package (#12908)Ruben Di Battista1-0/+31
2019-10-06Add missing py-contextlib2 (#13056)Oliver Breitwieser1-0/+20
Change-Id: I8e0a90d4aa2c9f46230a6fe35ce5f4fa44672faf
2019-10-05qt: help pick up dependencies (#11172)Denis Davydov2-5/+39
* qt: help pick up dependencies * qt: add 5.12.5
2019-10-05Package/fujitsu mpi (#12807)t-karatsu1-0/+40
* fujitsu-mpi: commit new package * Add homepage. * * Modified the MPI commands to a simple form. * Unnecessary processing has been deleted. * Add conflict for all compilers except the Fujitsu compiler. * Fix typo. * Delete versions. * Delete conditions for specifying the Fujitsu compiler.
2019-10-05expect: fix darwin install name (#13042)Adam J. Stewart1-0/+12
* expect: fix darwin install name * Fix expect binary as well
2019-10-05New package: cxxopts (#13035)Teodor Nikolov1-0/+42
* New package: cxxopts * Use +unicode instead of unicode=True - Make the unicode option more explicit * [cxxopts] Fix white space warnings
2019-10-05procps: new package (#13043)Adam J. Stewart1-0/+43
2019-10-04grpc: new package (#13054)Federico Ficarelli1-0/+43
* Add grpc@1.23.1 * Let version in url match actual one
2019-10-04llvm: update link to the document explaining codesign (#13047)Andreas Baumbach1-2/+2
Change-Id: I01242cbb43b0c62a659739a5d7e9d998dd27e794
2019-10-04Update the VTK-m package with better defaults and cuda corrections (#12850)Robert Maynard1-6/+16
2019-10-04superlu-dist: add openmp variant (#13052)Cody Balos1-0/+6
2019-10-04migrate: add zlib dependency. (#13039)Toyohisa Kameyama1-4/+8
* migrate: add zlib dependency. * flake8. * autotools related tools change to build.
2019-10-04LLVM 9.0.0 (#13050)Felix Thaler1-0/+16
2019-10-03fftw: simplify the recipe and make use of specific targets (#12889)Massimiliano Culpo1-123/+68
* fftw: grouped precisions in a single variant * fftw: simd options are now based on target features and not on variants * fftw: simplified computing the selected precisions
2019-10-03boost: Use gcc toolset for bootstrap with Fujitsu compiler. (#12876)t-karatsu1-1/+1
2019-10-03graphmap: add zlib dependency. (#13031)Toyohisa Kameyama1-0/+2
2019-10-03fastqvalidator: add zlib dependency and Removes erroneous deletes in ↵Toyohisa Kameyama2-0/+29
Chromosome (#13030)
2019-10-03hapcut2: add zlib dependency. (#13032)Toyohisa Kameyama1-0/+2
2019-10-03liblbxutil: Add zlib dependency. (#13033)Toyohisa Kameyama1-0/+1
2019-10-03metabat: Add zlib and ncurses dependency. (#13034)Toyohisa Kameyama1-0/+2
2019-10-03muse: add zlib dependency. (#13040)Toyohisa Kameyama1-0/+2
2019-10-03ngmlr: add zlib dependency. (#13041)Toyohisa Kameyama1-0/+2
2019-10-03fix ipykernel dependency, newer versions are python3-only (#13019)Andreas Baumbach1-2/+3
* fix ipykernel dependency, newer versions are python3-only * Update var/spack/repos/builtin/packages/py-ipykernel/package.py Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-ipykernel/package.py Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
2019-10-03Update cctools to v7.0.18 (#13037)George Hartzell1-1/+2
- add version/checksum info for v7.0.18 - update checksum for v6.1.1 to use sha256, while I have the editor open...
2019-10-03updated manta checksum (#13038)Owen Solberg1-0/+1
2019-10-03Add py-flye 2.6 (#13025)Adam J. Stewart1-2/+13
2019-10-03Add EasyBuild 4.0.0 (#13024)Adam J. Stewart4-18/+41
* Add EasyBuild 4.0.0 * Update homepage, remove no longer required deps * Replace version ranges with fixed versions
2019-10-03Update ECP Data & Vis SDK packages (#13027)Chuck Atkins2-23/+22
* ecp-io-sdk: Add faodel and sort variants * ecp-viz-sdk: Re-enable catalyst, sort variants, turn on by default * ecp-io-sdk and ecp-viz-sdk: Fix dependency variants
2019-10-02Remove support for generating dotkit files (#11986)Massimiliano Culpo2-2/+1
Dotkit is being used only at a few sites and has been deprecated on new machines. This commit removes all the code that provide support for the generation of dotkit module files. A new validator named "deprecatedProperties" has been added to the jsonschema validators. It permits to prompt a warning message or exit with an error if a property that has been marked as deprecated is encountered. * Removed references to dotkit in the docs * Removed references to dotkit in setup-env-test.sh * Added a unit test for the 'deprecatedProperties' schema validator
2019-10-02added tasmanian version 7.0 to spack (#13003)Miroslav Stoyanov3-4/+52
2019-10-02New package: mapnik (#12708)Sinan1-0/+54
2019-10-02libint + cp2k: 2-stage build with 'tune' and 'fortran' variants (#12475)Tiziano Müller2-20/+128
* libint: switch to 2-stage build for 2.6.0+ * libint: add tune and fortran variants * cp2k: add support for libint >= 2.0 * cp2k: use pkg-config for linking libxc
2019-10-02cdhit: add zlib dependency. (#13015)Toyohisa Kameyama1-3/+7
* cdhit: add zlib dependency. * Add zlib variant.
2019-10-02denovogear: Add missing zlib depenbdency and fix open handling error. (#13017)Toyohisa Kameyama2-0/+15
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