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2018-01-19Pull R list_urls from upstream.v0.11.1Todd Gamblin26-40/+27
2018-01-19Fix type issues with setting flag handlers (#6960)becker331-3/+8
The flag_handlers method was being set as a bound method, but when reset in the package.py file it was being set as an unbound method (all python2 issues). This gets the underlying function information, which is the same in either case. The bug was uncovered for parmetis in #6858. This is a partial fix. Included are changes to the parmetis package.py file to make use of flag_handlers.
2017-11-11petsc: update to version 3.8.2 (#6244)Satish Balay1-0/+1
Includes pkgconfig fix [for mfem static build failure]
2017-11-10Nekbone: Installing data files for example runs (#6243)Brian Homerding1-1/+4
* Nekbone: Installing data files for example runs * Typo Fix
2017-11-10Create symlink for 'swig' binary after installation. (#6240)Sergey Kosukhin1-0/+8
2017-11-10Fixed mfem mpi build issue. (#6254)Aaron Fisher1-4/+9
* Fixed mfem mpi build issue. * Fixed a non-mpi build issue and switched to the latest official MFEM release.
2017-11-10feature/r-reprex: new package (#6257)Yifan Zhu1-0/+47
2017-11-10add alpine ascent (#6224)Cyrus Harrison6-6/+551
* add ascent package and and deps * proper use of site_packages_dir prop * flake8 * add maitain, small updates * flake8 * flake8 * fixs for docstrings for sphinx
2017-11-10Add version 1.04 (#6259)becker331-0/+1
2017-11-10elfutils: add --no-as-needed flag for library ordering issue (#6256)becker331-1/+2
* add --no-as-needed flag for library ordering issue libelf * fix syntax error.
2017-11-10xclip: created new package (#6248)Yifan Zhu1-0/+46
2017-11-10r-clipr: created new package (#6249)Yifan Zhu1-0/+40
2017-11-09r-purrr: Create new package. (#6241)lingnanyuan1-0/+39
2017-11-09r-covr: Create new package. (#6239)lingnanyuan1-0/+48
2017-11-09r-readxl: Create new package. (#6238)lingnanyuan1-0/+42
2017-11-09r-cellranger: Create new package. (#6237)lingnanyuan1-0/+39
2017-11-09r-rematch: Create new package. (#6236)lingnanyuan1-0/+39
2017-11-09petsc: when hdf5 depends on zlib - petsc+hdf5 should also be configur… (#6189)Satish Balay1-2/+3
* petsc: when hdf5 depends on zlib - petsc+hdf5 should also be configured with zlib * petsc: fix dependency [of zlib to be on hdf5 - and not on petsc] * petsc: use the fact that hdf5/package.py has a hard dependency on zlib [so no need to check for this dependency in code] recommended-by: @davydden * petsc: change hdf5 dependency to 'hdf5+hl' as petsc configure is looing for -lhdf5_hl https://github.com/spack/spack/issues/5846
2017-11-09magma: cuda updates [from xsdk-0.3.0 branch] (#6160)Satish Balay1-1/+7
- add gcc dependency per cuda versions - Fix for cuda-9.0 as it does not support sm20 nvcc fatal : Unsupported gpu architecture 'compute_20'
2017-11-09r-log4r: Create new package. (#6133)lingnanyuan1-0/+38
2017-11-09mesa: fixed url for version (#5818)Simone Bnà1-2/+14
2017-11-09ROOT needs to have a consistent version of binutils, as it is very sensitive ↵Benedikt Riedel1-0/+1
to the version of libopcodes. You can't move the code from one system (with the same OS) as another. (#6226)
2017-11-09r-analysispageserver: Create new package. (#6135)lingnanyuan1-0/+41
2017-11-09py-dlcpar (#6229)Levi Baber1-0/+36
* py-dlcpar: new package * py-dlcpar: whitespace
2017-11-09pexsi: add version 0.10.2 (#6232)baip1-2/+5
2017-11-09add sundials 3.1.0 (#6230)David Gardner1-1/+4
2017-11-08fix perl dependent modules, #5900 (#5937)Luigi Calori1-6/+8
* FIX perl dependent environmwent setup to avoid void lines in generated modules as #5900 * remove debug prints * fix flake8
2017-11-08Package/sosflow (#6122)Alfredo Adolfo Gimenez2-0/+53
* Added missing deps to libffs * SOSflow spack package pointing to sos_flow feature/spack branch * Using tag for spack build * Change url to spack/spack
2017-11-08add patch for building sundials (#6161)David Gardner2-0/+25
* add patch for building sundials on mac * add upper limit on the patch
2017-11-08r-callr: created new package (#6223)Yifan Zhu1-0/+36
2017-11-08r-rex: Create new package. (#6221)lingnanyuan1-0/+38
2017-11-08r-rvest: created new package (#6220)Yifan Zhu1-0/+41
2017-11-08fastme: new package (#6219)Levi Baber1-0/+42
2017-11-08r-selectr: created new package (#6218)Yifan Zhu1-0/+45
2017-11-08r-tseries: Create new package. (#6216)lingnanyuan1-0/+39
2017-11-08Added missing build dependency to json-c (#6211)sknigh1-0/+2
2017-11-08r-allelicimbalance: Create new package. (#6044)lingnanyuan1-0/+56
2017-11-08r-mzr: created new package (#6206)Yifan Zhu1-0/+47
2017-11-08r-msnbase: new package (#6207)Yifan Zhu1-0/+57
2017-11-08r-sqldf: Create new package. (#6208)lingnanyuan1-0/+50
2017-11-08r-gsubfn: Create new package. (#6209)lingnanyuan1-0/+49
2017-11-08r-vsn: new package (#6210)Yifan Zhu2-1/+54
* r-hexbin: updated md5 * r-vsn: created new package
2017-11-08r-quantmod: Update version to 0.4-11 (#6212)lingnanyuan1-0/+2
2017-11-08r-xml2: created new package (#6217)Yifan Zhu1-0/+40
2017-11-08r-timedate: Create new package. (#6215)lingnanyuan1-0/+36
2017-11-08r-fracdiff: Create new package. (#6214)lingnanyuan1-0/+37
2017-11-08r-forecast: Create new package. (#6213)lingnanyuan1-0/+49
2017-11-08gasnet: add 1.30.0 (#6167)Christoph Junghans2-7/+20
* gasnet: add 1.30.0 * gasnet: expose more options as variants * gasnet: change defaults
2017-11-08guidance: new package (#6079)Audrey Thoma1-0/+66
* guidance: new package * not really fixed yet * adding loop * fixing url * dang typos
2017-11-08r-ampliqueso: Create new package. (#6132)lingnanyuan1-0/+51