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2017-03-10Adding new package: py-keras (#3400)Javier3-0/+129
* Adding new package: py-keras (and dependencies) * Fixing dependencies
2017-03-10Confining CPPFLAGS=-P to only happen for GCC. (#3404)Jon Rood1-4/+8
2017-03-10Adding new package: py-py4j (#3390)Javier1-0/+38
* Adding new package: py-py4j * Adding missing depedency
2017-03-10Adding new package: py-joblib (#3399)Javier1-0/+40
2017-03-10Adding new package: vdt (#3396)Javier1-0/+38
2017-03-10Adding new package: vc (#3397)Javier1-0/+45
2017-03-09Adding new package: py-pathos (and dependencies) (#3391)Javier5-0/+208
* Adding new package: py-pathos (and dependencies) * Fixing required versions
2017-03-09New gcc uses C++14 mode, this fixes implicit conversion (#3392)George Hartzell2-0/+11
* New gcc uses C++14 mode, this fixes implicit conversion The issue is described in depth [here][desc]. C++14 no longer allows implicit conversion from iostream classes to void*. This patch comes directly from [PR #6][patch]. [desc]: http://stackoverflow.com/questions/38659115/make-fails-with-error-cannot-convert-stdistream-aka-stdbasic-istreamchar [patch]: https://github.com/agordon/libgtextutils/pull/6 * mend
2017-03-09Adding new package: py-4suite-xml (#3389)Javier1-0/+37
2017-03-09created elf virtual package and updated dependent packages (#3317)Gregory Lee9-44/+78
* created elf virtual package and updated dependent packages * added `hide_files` context manager to handle moving files.
2017-03-09cosmomc: New package CosmoMC (#3292)Erik Schnetter6-0/+418
* cosmomc: New package CosmoMC * cosmomc: Improve version numbering scheme * planck-likelihood: New package * cosmomc: Pacify flake8 * cosmomc: Code cleanup as requested in the review * cosmomc: Various updates suggested during review * cosmomc: Limit compiler versions (as documented in the build instructions) * cosmomc: Correct flake8 error * cosmomc: Use `libs` instead of `lapack_libs` * planck-likelihood: Make makefile output more verbose and readable * planck-likelilhood: Correct order of libraries when calling linker * cosmomc: Clean up check for suitable compiler * planck-likelihood: Use modern mechanism to set environment variables
2017-03-09Updated the spectrum-mpi package to get the right compiler names when (#3381)Brian Van Essen1-0/+5
we use spectrum.
2017-03-09udunits2: Add build dependency on texinfo (#3383)Michael Kuhn1-0/+1
2017-03-09ncl: Update to 6.4.0 (#3384)Michael Kuhn1-3/+4
2017-03-09Fixing checkum of py-coverage v4.3.4 (#3386)Javier1-1/+1
2017-03-09patch: configure and build out of source fixes #3387 (#3388)Massimiliano Culpo1-0/+2
2017-03-08Fixes the Elemental and LBANN packages to conform to the new syntax (#3382)Brian Van Essen2-3/+3
introduced by PR https://github.com/LLNL/spack/pull/1875
2017-03-08Add package py-guiqwt and dependencies (#3334)healther4-0/+169
* add package py-guiqwt with dependencies * fixed url * fixed url2 * Update package.py * Update package.py
2017-03-07Adding farmhash package from google (#3239)AP972-0/+67
* Adding farmhash package from google
2017-03-07Added gemmlowp package (#3240)Aidan San1-0/+40
2017-03-07LIBXSMM 1.7.1 (#3371)Hans Pabst1-11/+43
* Cleanup list of offered versions (only the latest update release of each minor version is kept: 1.4.4, 1.5.2, 1.6.6, 1.7.1); introduced master revision (via Git). Slightly more selective installation of the documentation; copy README.md and LICENSE files to documentation folder. Removed outdated build options (make_args); generally stay with LIBXSMM's defaults (general purpose build). Introduced one build variant ("debug"). * Incorporated comments of PR #3371 (https://github.com/LLNL/spack/pull/3371). * Fixed flake8 complaints. * Made the full list of versions available starting with version 1.4 (there are earlier releases, however those have been released before the Spack specification became available; original spec. also started with 1.4). * Made DBG and TRACE actually two separate arguments.
2017-03-05openblas: Run tests only when requested (#3370)Erik Schnetter1-0/+2
The tests fail on some systems (e.g. Comet at SDSC) that impose limits on the number of processes or threads one can run simultaneously on the head node. Thus the tests should not be run by default.
2017-03-05Fixes veclibfort which was broken by PR1875 (#3368)Barry Smith1-1/+2
Funded-by: IDEAS Project: IDEAS/xSDK Thanks-to: Adam J. Stewart
2017-03-04add package py-py-cpuinfo (#3339)healther1-0/+36
* add package py-py-cpuinfo * renamed package to py-cpuinfo
2017-03-04Allow find_libraries to accept lists or strings (#3363)Adam J. Stewart8-15/+15
* Allow find_libraries to accept lists or strings * Convert one more example from list to string
2017-03-04atlas: added a missing property decorator (#3366)Massimiliano Culpo1-0/+1
2017-03-04fix blas/lapack usage after PR 1875 (#3365)Denis Davydov3-20/+20
2017-03-04ADIOS: change subclassing from Package to AutotoolsPackage (#3230)serbanmaerean1-10/+7
* ADIOS: change the invocation of python script that generates test files The python script ADIOS*/utils/gpp/gpp.py is invoked directly in the ADIOS*/tests/genarray/Makefile and the name of the python interpreter can be quite long if it is one built under spack, i.e. longer than the 80 characters allowed by the #! line in bash. The name of the shbang line is truncated at 80 characters and bash cannot find the python interpreter specified. This fix changes how the script is executed, by invoking it under python. This way, the shbang line is ignored. * adios: fixed flake8 errors from previous commit. * adio: Switch to AutotoolsPackage class from Package class Switched in order to add support for the ppc64le platform.
2017-03-04Using fPIC in PERL when using an Intel compiler. (#3355)Jon Rood1-2/+7
2017-03-04Convert gl2ps to CMakePackage (#3360)Adam J. Stewart1-6/+33
* Convert gl2ps to CMakePackage * Remove unused spec variable
2017-03-04ncurses: Work around an awk bug (#3361)Erik Schnetter1-0/+3
2017-03-04correct ipython dependency (#3332)healther3-5/+52
* correct ipython dependency * needed to introduce a github download for py-jedi * corrected dependencies * restrict appnope dependency to darwin>10.8 * flake8 fix
2017-03-04add package py-junit-xml (#3336)healther1-0/+38
* add package py-junit-xml * Update package.py * flake8 fix
2017-03-03Added magma package (#3273)eklee152-0/+315
* Added magma package * Incorporated Serban's change * Removed cmake dependency
2017-03-03add package py-neo and py-quantities (#3337)healther2-0/+77
* add package py-neo and py-quantities * Update package.py * fixed errors
2017-03-03add package py-pyminifier (#3340)healther1-0/+36
2017-03-03add package py-serial (#3341)healther1-0/+36
* add package py-serial * fixed setuptools dependency
2017-03-03add package py-pyfftw (#3342)healther1-0/+41
* add package py-pyfftw * Update package.py
2017-03-03Revert "Make libgcc_s relocatable on Macos by adding @rpath to installname" ↵Adam J. Stewart1-11/+2
(#3349)
2017-03-03openblas: fix flags (#3344)Denis Davydov1-2/+2
2017-03-03features/highwayhash (#3242)Andrew Holler1-0/+62
* Adding highwayhash package from Google * Added the highwayhash package for Tensorflow * Fixed the numerous flake8 issues * fixed requested changes * added conditionals for some installs * forgot an import * create install directories before you install anything in them
2017-03-03add versions to package py-pandas (#3338)healther1-3/+5
2017-03-03scipy build fails when built in parallel (#3275)Adam J. Stewart1-1/+8
2017-03-03opencoarrays: Correct download url, update version (#3322)Erik Schnetter1-1/+2
2017-03-03Add package sga. (#3330)健美猫1-0/+61
2017-03-03add package py-lmfit (#3333)healther1-0/+38
* add package py-lmfit * needed to deactivate testing in openblas due to spec.cppflags being undefined * undid openblas modification
2017-03-03add package py-myhdl (#3335)healther1-0/+38
* add package py-myhdl * Update package.py
2017-03-03Fix simul by diabling inline and replacing mpicc command. (#3323)健美猫1-0/+2
2017-03-03add package py-elephant (#3302)healther1-0/+48
* add package py-elephant * add variants for docs and pandas
2017-03-03add resource manpages to package git (#3299)healther1-14/+90
* add resource manpages to package git * Update package.py * added manpages per version * added explaining comment * fixed synatx error
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