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2019-04-16precice package: add versions and dependencies (#11176)Frédéric Simonis1-3/+10
* Add versions 1.4.0, 1.3.0, and 1.2.0 * Add dependencies and update constraints (e.g. version 1.4.0 of precice requires a later version of boost) * Add maintainers
2019-04-16QMCPACK package: Remove Spack MKL hack for older version (#11127)Nichols A. Romero1-18/+23
A Spack hack for MKL usage was needed in QMCPACK prior to version 3.5 when non-Intel compilers were used. This Spack hack could have undesirable side-effects and led to ugly code that was extra work to maintain. For older versions of QMCPACK, we throw a conflict if you want to use Intel MKL with the other compilers commonly found on x86. Note that there is no impact to version of QMCPACK since 3.5.
2019-04-16superlu-dist: fix issue with adding system blas/lapack - when MKL is ↵Satish Balay1-2/+2
explicitly specified (#11187) Version 6 added dependency on LAPACK - so additional -DTPL_LAPACK_LIBRARIES option is required Ref: https://github.com/xiaoyeli/superlu_dist/issues/36 Ref: https://github.com/spack/spack/issues/10173
2019-04-15add charliecloud 0.9.9 (#11190)Jordan Ogas1-0/+1
2019-04-15cmake: add version 3.14.2 (#11192)Matthias Diener1-0/+1
2019-04-15pixman: fix patch (#11173)Denis Davydov1-1/+1
2019-04-15boost: add 1.70.0 (#11183)Denis Davydov1-2/+4
2019-04-15verilator: Fix FlexLexer.h not found (#11185)Oliver Breitwieser1-1/+1
Similar to #10956 flex needs to be a link-dependency for verilator in order for FlexLexer.h to be found during install.
2019-04-15petsc4py: add verson 3.11.0 (#11186)Satish Balay1-0/+4
Also added maintainers
2019-04-12Update FASTMath metapackage (#11171)Mark C. Miller1-3/+1
* Limit to FASTMath-only packages * Replace boxlib with amrex As requested by @asalmgren
2019-04-12petsc: add fftw variant (#11178)Satish Balay1-1/+4
2019-04-12petsc: add version 3.11.1 (#11179)Satish Balay1-0/+1
2019-04-12py-deeptools: adding release 3.2.1 sha256 sum (#11174)Owen Solberg1-0/+1
2019-04-11xsdk@develop: enable amrex@develop+sundials (#11169)Satish Balay1-2/+2
2019-04-11amrex: add sundials variant (#11147)Cody Balos1-1/+5
2019-04-10libxsmm package: add variant to build generator executables (#11114)brietzke1-0/+10
2019-04-10fzf package: change mirror and add vim plugin (#10920)clellsolomon2-3/+39
This commit edits the Makefile to use github.com mirrors rather than the default mirrors of the dependency packages installed by GO.
2019-04-10New Packages: ecp-io-sdk and ecp-viz-sdk (#11073)Chuck Atkins2-0/+91
2019-04-10py-requests: Add missing dependencies for versions 2.16.0 and up (#10996)Eric Martin1-0/+5
2019-04-10Fix bug when system perl is used. (#11034)Patrick Gartung1-7/+11
* Fix bug when system perl is used. If system perl is being used through packages.yaml there cannot be dependent modules. The setup_dependent_packages function should not do anything in that case.
2019-04-10dealii: fix build with tbb from intel parallel studio (#11138)Denis Davydov1-1/+13
2019-04-10suite-sparse: fix tbb patching (#11155)Denis Davydov1-1/+1
2019-04-09libfabric: Add 1.7.1 (#11141)Michael Kuhn1-0/+1
2019-04-09wget: add version 1.20.3 (#11148)Matthias Diener1-0/+1
2019-04-09intel: consolidate libs() in the base class (#11143)Denis Davydov2-28/+0
* intel: consolidate libs() in the base class * white space * flake8
2019-04-09openmpi: add 4.0.1 (#11126)Denis Davydov1-1/+8
* openmpi: add 4.0.1 * openmpi: enable-mpi1-compatibility for 4.0.1 and above * remove preferred * make 3.1.3 preferred
2019-04-09xsdk@develop: enable hypre shared (even on OSX) and superlu-dist variant ↵Satish Balay1-1/+1
(#11131)
2019-04-09cdhit - add new release 4.8.1 checksum (#11130)Owen Solberg1-0/+1
2019-04-09mumps: add version 5.1.2 (#11132)Satish Balay2-0/+70
Add patch for gfortran-8 runtime errors
2019-04-08Unset SPACK_INCLUDE_DIRS so the compiler wrapper does not prepend any -I ↵Patrick Gartung1-0/+1
flags. The assumption is that cmake will set the correct include flags. (#11129)
2019-04-08zfp: Add 0.5.4 (#11016)Michael Kuhn1-0/+1
2019-04-08Add new TFEL' versions (3.0.4, 3.1.4 and 3.2.1). Add new MGIS version ↵thelfer2-1/+6
(1.0.1). (#11109)
2019-04-08kokkos: update cuda conflict (#11110)Cameron Smith1-4/+3
see https://github.com/spack/spack/pull/10943#issuecomment-475303870
2019-04-08sra-toolkit new version (#11111)Levi Baber1-0/+1
2019-04-07netlib-scalapack: fix compatibility with mpi2 i.e openmpi-4 (#11124)Satish Balay2-0/+145
2019-04-06ecp-proxy-apps: update version (#11119)Abhinav Bhatele1-3/+10
2019-04-05hypre: disable variant superlu-dist default (#11097)Satish Balay1-1/+1
2019-04-05fixes py-basemap package (#11104)Gregory Lee1-2/+26
* fixes py-basemap package * remove basemap mpl_toolkit __init__.py
2019-04-04Set Geant4 cmake module path environment variable in dependents. (#11112)Patrick Gartung1-0/+13
2019-04-04xcb-util-wm: add m4 build system dependency (#11056)Marco Comparato1-0/+2
2019-04-03miniamr: add develop version and update release (#11101)Abhinav Bhatele1-0/+4
* miniamr: add develop version and update release * change from url to git * add url back
2019-04-03raja: add newer versions (#11102)Abhinav Bhatele1-0/+3
2019-04-03laghos: update dependencies (#11100)Abhinav Bhatele1-0/+3
2019-04-03AMG: update version (#11099)Abhinav Bhatele1-0/+1
2019-04-02fio package: add optional libaio dependency (#11083)Phil Carns1-0/+2
2019-04-02proj package: add versions 5.2.0 and 5.1.0 (#11079)Neil Flood1-2/+12
* Add versions 5.2.0 and 5.1.0 * Avoid adding version 6.0.0: this version has a new API that is not compatible with older versions (and dependents may break with it) * Added comment block explaining the problems with version 6.x * Replace old datumgrid resource (1.7) with new (1.8) * Add speculative sqlite dependency for when a 6.x version is added
2019-04-02ross package: add version 7.0.1 (#11078)Elsa Gonsiorowski, PhD1-9/+12
* add version 7.0.1 * replace md5 with sha256 for various versions. * v7.0.1 fixes some environment hacking to properly find MPI and system architecture
2019-04-02kim-api and openkim-models: version update and rename (#11065)Ryan S. Elliott2-14/+21
2019-04-02Trilinos: Add Tpetra_INST_INT_LONG_LONG to explicit template instantiation ↵Jon Rood1-0/+1
(#11060)
2019-04-02openmpi: Add stub mpirun script for openmpi~legacylaunchers+slurm (#11059)Seth R. Johnson2-0/+13
This adds a stub script for mpirun and other standard executables when installing OpenMPI with slurm. The purpose is to make the removal less of a surprise to administrators/users: it explains why they were removed and how to restore them.
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