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2019-09-07Add py-numpy 1.17.2 (#12753)Adam J. Stewart1-1/+2
2019-09-07Add patches to work around CMake versions (#12744)Piotr Luszczek3-0/+38
- Use of symbol testing macro requires explicit include() - CMake policies are not version-portable and the support has to queried based on CMake version
2019-09-07font-util 1.3.2 (#12728)Owen Solberg1-0/+1
2019-09-07new package: py-pygdal (#12747)Sinan1-0/+31
2019-09-07adding shadow-uidmap (#12750)Vanessasaurus1-0/+18
Signed-off-by: Vanessa Sochat <vsochat@stanford.edu>
2019-09-06upcxx: new packageMathias Jacquelin1-0/+89
Adding a UPC++ spack package pointing to the default 2019.3.2 UPC++ version, and allowing to build UPC++ with the experimental CUDA variant.
2019-09-06openspeedshop: fixed build on arm. (#11861)Toyohisa Kameyama4-0/+52
* openspeedshop: fixed build on arm. * remove patch comment.
2019-09-06libpeas@1.22.0: new package (#12385)Geoffrey Oxberry1-0/+107
* libpeas@1.22.0: new package * libpeas: note more build dependencies Build and link dependencies were obtained through a combination of examining the `config.log` file from `configure` and looking at the pkg-config files of `libpeas`. * libpeas: add search path for GIR/typelib files
2019-09-06iso-codes: new package (#12389)Geoffrey Oxberry1-0/+23
2019-09-05fftw: change default value of simd variant for other than x86_64 (#11627)Toyohisa Kameyama1-1/+38
* Use spec.architecture.target insted of platform. * remove default in simd variant value. simd variant change to archtecture independent values. * Add check simd values. * rewrite check simd values. * * flake8 * change aarch64 to arm (neon support only 32 bit arm.)
2019-09-05FIX Catalyst: corrected catalyst package for aarch64 targets (#12707)Matthieu Dorier1-0/+5
* corrected catalyst package for aarch64 targets * corrected syntax * corrected undefined variable
2019-09-05Add pixz package (#12698)Ruben Di Battista1-0/+18
2019-09-05[jemalloc] added version 5.2.1 (#12706)Jennifer Herting1-0/+1
2019-09-05textparser: new package (#12713)Hironori-Yamaji2-0/+112
* textparser: new package * textparser: use 'parallel = False'
2019-09-05mariadb: Add missing dependencies (#12715)Michael Kuhn1-0/+7
Found while building mariadb in a minimal build environment.
2019-09-05py-ase: New version 3.18 (#12697)Janne Blomqvist1-1/+7
* py-ase: New version 3.18 Add ASE version 3.18. ASE 3.18 has dropped support for python 2.x, hence add a dependency on python@3.5: for it. * Add more ASE dependencies Address review comments, add dependencies on py-scipy, py-matplotlib, py-flask, and also add type=('build', 'run') dependency specifiers.
2019-09-04cctools: fixed to build on ARM. (#11862)Toyohisa Kameyama2-0/+29
2019-09-04Add Go 1.13Paul Bryant1-0/+1
2019-09-04openblas: Add route to f_check for Fujitsu compiler. (#11804)t-karatsu2-0/+17
2019-09-04Add gams recipe (#12700)asmaahassan901-0/+37
* Add gams recipe * Break down lines to pass lint
2019-09-04boost: add -c option to C/C++ compile commands for clang. (#12694)t-karatsu3-0/+44
2019-09-04cppflags point to ncurses headers (#12691)Mario Melara1-0/+5
While debugging this package on our Cray machine, tmux was throwing an error involving the ncurses headers. Tmux would look for headers in system locations rather than where spack installed ncurses. Tested only on a Cray.
2019-09-04Add tecplot recipe (#12688)asmaahassan901-0/+30
* Add tecplot recipe * break down description to pass lint * fix format to match python 2.6 requiremnets * importing os
2019-09-04Boost: fixed problem when requesting ~signals for boost >= 1.69 (#12627)Matthieu Dorier1-7/+7
* fixed problem when requesting ~signals for boost >= 1.69 * added checks for all libs in with_libs
2019-09-04new package: liblas (#12619)Sinan1-0/+54
* new package: liblas * explicitly disable build options * fix indentation
2019-09-03py-chardet package: add py-pytest-runner dependency (#12692)Peter Scheibel1-0/+1
This required dependency was missing
2019-09-03new package: protobuf-c (#12634)Sinan1-0/+20
* new package: protobuf-c * Update var/spack/repos/builtin/packages/protobuf-c/package.py Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
2019-09-03Boost/Change the method for analysis version (#12676)t-karatsu2-0/+14
* boost:Change the method for analysis version when using Fujitsu compiler. * Change version to apply patch for Fujitsu. * fix typo
2019-09-03pmlib: new package (#12625)Hironori-Yamaji2-0/+132
* pmlib: new package * pmlib: fix options and add patch * pmlib: fix the patch file
2019-09-03ccs-qcd: new package (#12681)Hironori-Yamaji1-0/+68
* ccs-qcd: new package * ccs-qcd: fix variant and replacement string
2019-09-02tests: add tests for `spack extensions` commandTodd Gamblin3-20/+4
- add tests for `spack extensions` - refactor `test_activations` test to use real extensions.
2019-09-02esmf: Fix build with gcc@8: (#12678)Michael Kuhn3-12/+161
2019-09-02Add XSSP recipe (#12679)asmaahassan901-0/+41
2019-09-02icu4c: Add missing python dependency (#12683)Michael Kuhn1-0/+7
2019-09-02Add fpocket (#12675)asmaahassan901-0/+26
* Add fpocket * fix recipe break down the description to pass lint * update license * make changes as per maintainer's review
2019-09-01Install the newest version of ncbi-rmblastn (#12580)asmaahassan902-3/+251
* Install the newest version of ncbi-rmblastn Version ncbi-rmblastn 2.2.28 coonfiguration fails for gcc compiler on ubuntu 16.04 due to some compatibility issues that requires manual intervention to keep the installation going. However you still stumble upon other issues while compiling it. Using Intel compiler passes the configuration step but fails for the compilation process as well. Here I'm using the latest version and patch, and the recommended configuration option as mention in http://www.repeatmasker.org/RMBlast.html * uploading ncbi-blast patch
2019-09-01IDBA: package does not need conflicts with other compilers (#12674)Kevin Manalo1-8/+0
2019-09-01Add Vesta recipe (#12581)asmaahassan901-0/+29
* Add Vesta recipe * Break down description to pass lint * Make changes as maintainers' review * remove whitespaces
2019-09-01A new package: fastp. (#12671)健美猞猁1-0/+20
* A new package: fastp. * Flake8. * Flake8.
2019-08-31new package: py-requests-oauthlib (#12548)Sinan1-0/+24
* new package: py-requests-oauthlib * add a version * fix typo
2019-08-31new package: py-systemd-python (#12595)Sinan1-0/+15
2019-08-31Add MKL variant to Julia (#12602)Glenn Johnson1-0/+5
This PR provides an option to build Julia with Intel MKL.
2019-08-31new package: optipng (#12608)Sinan1-0/+20
2019-08-31new package: pngquant (#12609)Sinan1-0/+18
2019-08-31new package: pktools (#12611)Sinan1-0/+42
* new package: pktools * rename and enable utilities * enable build with FANN * add variants, dependencies * expcitly turn off options when not in use
2019-08-31new package: FANN (#12614)Sinan1-0/+26
2019-08-31Add int64 variant to pumi and zoltan (#12630)Cameron Smith2-1/+9
* pumi and zoltan: add int64 variant * typo
2019-08-31add variant for building RTREE module (#12668)Sinan1-0/+6
2019-08-31new package: libwebp (#12669)Sinan1-0/+19
2019-08-31Add conflicts statement to mariadb (#12670)Glenn Johnson1-0/+2
The mariadb-5.5 series can not be compiled with gcc-9.1.0 and above. Add a conflicts statement to reflect that. The error is due to -Werror=address-of-packed-member, a warning that is new in gcc-9.
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