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2020-02-12protobuf: Fix intel compiler failures. (#14916)Chuck Atkins3-1/+59
2020-02-12Adding Intel LLVM compiler (#13618)Jon Rood1-0/+50
* Adding Intel LLVM compiler. * Fixing some minor issues. * Split build environment on run environment in intel-llvm.
2020-02-12Paraview: fix PYTHONPATH for static build. (#14648)Dan Lipsa1-5/+12
* Fix PYTHONPATH for static build. * Only for the latest version.
2020-02-12openPMD-api: Build Env Fix & Dev (#14904)Axel Huebl1-2/+2
- fix a missing `env.` prefix in the build environment. - rename development branch to same name as in git
2020-02-11WarpX: master is the new develop (#14898)Axel Huebl1-6/+2
WarpX removed the `dev` branch in favor of a simpler, `master`-centric development model. `master` is the new development branch and there is no stable branch anymore (we use tags and release branches instead).
2020-02-11New package: ReFrame (#14737)victorusu1-0/+34
2020-02-11ROOT: Add Pythia8 support (#14790)Hadrien G2-4/+5
2020-02-11OpenCV package: add versions 4.2.0, 4.1.2, and 4.1.1(#14814)darmac1-1/+4
2020-02-11[dd4hep] Make DDDigi work with current TBB releases (#14791)Hadrien G2-0/+45
Add patch for DDDigi's broken TBB support. The issue is fixed in DD4hep master so the patch is only required for 1.11.0
2020-02-11New package: libvips (#14794)Sajid Ali1-0/+45
2020-02-11libdrm: add version 2.4.100 (#14809)darmac1-7/+8
2020-02-11r-truncdist: new package at 1.0-2codeandkey1-0/+19
2020-02-11[mono] add version 6.8.0.105Jen Herting1-0/+2
2020-02-11Fix intel-mkl package (#14856)Scott Wittenburg2-0/+20
* Add cpio package * intel-mkl: Depend on cli tool needed during build
2020-02-11Fix QT4 platform detection for linux clang (#14891)Seth R. Johnson1-3/+25
* Fix QT4 platform name for linux clang * Fix clang compiler flags on QT4
2020-02-11precice: add version 2.0.0 (#14842)Frédéric Simonis1-7/+31
Added python3 dependency Added support for new CMake variables
2020-02-11unifdef: added new package (#14880)Matthias Diener1-0/+25
2020-02-11heffte: added v0.2 (#14881)Christoph Junghans1-0/+1
2020-02-11hepmc: added versions up to v3.2.0 (#14805)darmac1-1/+7
2020-02-10Hydrogen: update dependency on aluminum (#14760)Brian Van Essen3-11/+19
* Hydrogen now depends on `aluminum +nccl` vs. `aluminum +mpi_cuda` * Hydrogen: Simplify Mac OS OpenMP-detection logic * Aluminum: Add Mac OS OpenMP-detection logic * LBANN: depend on conduit@0.4.0: instead of conduit@master
2020-02-10Spack find: fix queries that specify dependencies (#14757)Massimiliano Culpo1-0/+15
Fixes #10019 If multiple instances of a package were installed in a single instance of Spack, and they differed in terms of dependencies, then "spack find" would not distinguish specs based on their dependencies. For example if two instances of X were installed, one with Y and one with Z, then "spack find X ^Y" would display both instances of X.
2020-02-10libedit package: add version 3.1-20191231 (#14851)Peter Scheibel1-0/+1
This new version of libedit can make use of an ncurses dependency built with +termlib (which moves some symbols into a separate libtinfo).
2020-02-10Fix vim build with ^ncurses+termlibGlenn P Johnson1-1/+4
This PR will set the approriate library if ncurses is built with a separate tinfo library.
2020-02-10icedtea: added versions up to v3.9.0 (#14806)darmac1-1/+7
2020-02-10New package: r-biomartr (#14812)Glenn Johnson3-3/+77
This PR creates the r-biomartr package as well as needed new packages and updates. - new dependency: r-philentropy - update: r-curl
2020-02-10acts-core: added v0.16.0 (#14839)Hadrien G1-6/+17
* Adapt to ACTS v0.16 * ACTS uses the DD4hep XML components nowadays
2020-02-10New package: r-watermelon (#14864)Glenn Johnson8-0/+185
This PR creates the r-watermelon package, along with dependencies. - new package: r-fdb-infiniummethylation-hg19 - new package: r-illuminahumanmethylation450kanno-ilmn12-hg19 - new package: r-lumi - new package: r-methylumi - new package: r-roc - new package: r-txdb-hsapiens-ucsc-hg19-knowngene - updated package: r-matrixstats, new version needed as a dependency
2020-02-10New package: r-suppdists (#14865)Glenn Johnson1-0/+22
2020-02-10New package: r-imager (#14866)Glenn Johnson3-0/+83
This PR adds the r-imager package and dependencies. - new package: r-bmp - new package: r-readbitmap
2020-02-10New package: r-proj (#14872)Glenn Johnson1-0/+27
2020-02-10New package: r-proj4 (#14871)Glenn Johnson1-0/+22
2020-02-10New package: r-pscbs (#14867)Glenn Johnson4-0/+82
This PR adds the r-pscbs package along with new dependencies and updates. - new package: r-aroma-light - new package: r-r-cache - updated package: r-r-oo
2020-02-10New package: r-copula (#14874)Glenn Johnson5-0/+115
This PR adds the r-copula package and dependencies. - new package: r-adgoftest - new package: r-gsl - new package: r-pspline - new package: r-stabledist
2020-02-10New package: r-gsalib (#14873)Glenn Johnson1-0/+18
2020-02-10openblas: added v3.8.0 (#14875)Kai Torben Ohlhus1-0/+1
2020-02-10xterm: added versions up to v353 (#14829)darmac1-0/+4
2020-02-10openldap: added v2.4.49 (#14815)darmac1-0/+1
2020-02-10pngquant : add depency on libpng (#14836)darmac1-0/+2
2020-02-09octave: add 5.2.0 (#14868)Kai Torben Ohlhus1-0/+1
Add version Octave 5.2.0 including sha256.
2020-02-09New package - r-rmariadb (#14762)Glenn Johnson2-0/+30
* New package - r-rmariadb This PR creates the r-rmariadb package. It also includes an update to the r-dbi package as a newer version of that is needed. * Update var/spack/repos/builtin/packages/r-rmariadb/package.py Argh, copy/paste. I wish the mirror would list itself as the archive site as well, but it just mirrors that data field from CRAN site. Thanks for catching that, I will make sure to look for that in the future. Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * Use mariadb-client Use mariadb-client so people can set a preferred provider. Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-02-09intel-tbb: fix sha256 sums for 2020 versionsMark W. Krentel2-2/+47
Fixes #14850. Commit 6b1958219 added versions 2020 and 2020.1 for intel-tbb as part of updating several intel packages but added the wrong sha256 sums for the github/01org repository. Also, version 2020 is 2020, not 2020.0. Add patch makefile-debug to restore the debug targets.
2020-02-07Align default libxml2 settings for gettext and Python (#14795)Dan Lipsa1-1/+1
Python depends on gettext. Packages that depend on gettext and Python together will encounter a concretizer bug which incorrectly detects a constraint conflict. This sets the default value of +libxml2 in Python to be the same as gettext so that packages which depend on both (like mesa) can successfully concretize without adding manual constraints.
2020-02-07r-evd: new package at 2.3-3codeandkey1-0/+16
2020-02-07r-stargazer: new package at 5.2.2codeandkey1-0/+16
2020-02-07patch aws-parallelcluster so that it doesn't require enum34 (#14796)Adam J. Stewart3-5/+47
* aws-parallelcluster always depends on enum34 * Build aws-parallelcluster without enum34 * Update homepage * Add unit tests
2020-02-07NAG Compiler 7.0 (Build 7009) download checksum (#14840)Themos Tsikas1-1/+1
2020-02-07imlib2: added v1.6.0 and v1.6.1 (#14807)darmac1-1/+3
2020-02-07libconfig: added v1.7.2 (#14808)darmac1-0/+1
2020-02-07lighttpd: added versions up to v1.4.55 (#14810)darmac1-0/+5
2020-02-07maven: added versions up to v3.6.3 (#14811)darmac1-0/+4
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