Age | Commit message (Collapse) | Author | Files | Lines |
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Fix bug in string conversion of "make_jobs"
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- add version 2.1.4
- change url to github
- add perl dependencies
- new version has a new source layout
- filter shebang to use spack perl
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- add missing perl dependency
- only filter Makefile if referred to dependency is in the spec
- rewrite the shebang line of scripts to use spack perl
- remove tabix dependency as tabix and bgzip are part of htslib
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- add version 4.46
- add missing perl dependencies
- new version has different source layout
- filter shebang to use spack perl
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This version in combination with the included patch can install
without root.
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Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
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* add compilation option to sqlite
* rename variant
* fix bug
* re-rename variant
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* openmx: new package
* openmx: use copy method
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* cuda: New version 10.1.243
Adds CUDA 10.1.243. The installer command-line arguments have slightly
changed, hence in the install method the version needs to be inspected
in order to give the correct arguments for the new installer.
* cuda: Combine common command-line arguments
The CUDA 10.1+ installer has slightly different command-line arguments
than previous versions. Keep the common parts together and only split
where they are different.
* Make flake8 happy
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* create new package py-atropos
* remove whitespace
* make tqdm and pysam dependencies optional, exposed as variants
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* update bbmap
* remove one extra comment line
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pkgconfig is the virtual dependency, pkg-config is an implementation.
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* update py-bokeh: new version & dependencies
* Revert "update py-bokeh: new version & dependencies"
This reverts commit 5e191a0b20a89f09630b4d223a28b19db715603f.
* update py-bokeh: new version & dependencies
* trigger travis-ci
* adjust python dependency-type to br
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* update py-bokeh: new version & dependencies
* Revert "update py-bokeh: new version & dependencies"
This reverts commit 5e191a0b20a89f09630b4d223a28b19db715603f.
* new package: py-fsspec: add package.py
* trigger travis-ci
* adjust python dependency-type to br
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* Update paraview
* Paraview 5.6.2 provides only .xz (no .gz)
* Add list_url and list_depth
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* CGNS: Add setting of RPATH on Darwin
This should go in the CGNS CMakeLists.txt, but it isn't there yet and won't be in previous versions, so best to handle it here.
If building on darwin/MacOSX, need to set the RPATH so applications can find shared library correctly.
* Restrict MACOSX_RPATH setting
This has now been added to the CGNS distribution, so the setting of `CMAKE_MACOSX_RPATH` should be restricted to current and previous releases and not upcoming releases.
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* new package: py-iniparse
* add git version supporting python3
* redo python dependency
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* new package: py-configojb
* add version 4.7.2
* improve dependencies
* fix url for versions > 5.0.0
* Update var/spack/repos/builtin/packages/py-configobj/package.py
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-configobj/package.py
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
* use format to create url strings
* fix typo
* improve style
* Update var/spack/repos/builtin/packages/py-configobj/package.py
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
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* adding checksum for singularity 3.4, adding dep for shadow
* make v3.4 a TODO for now -- needs cryptsetup package first
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* Fix PyQt installation
* Switch dependency type
* Replace SIP dependency with resource
* Relax py-pyqt4 Qt dependency
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(#12737)
* py-gpaw: Fixing missing numpy include path, adding newer version of py-gpaw and fixing a bug with libxc.c in older py-gpaw
* py-gpaw: Fix Python and ASE version dependencies
- GPAW 19.8.1 requires Python 3.x, add dependency on python@3.5:
- GPAW releases are associated with a corresponding ASE release, add
matching ASE version dependencies.
* py-gpaw: Enable the scalapack variant by default
GPAW installation instructions say scalapack is optional but "highly
recommended". Thus enable it by default.
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* add new cutadapt release 2.5, and adjust dependencies conditional on version
* use https, not ssh, for git url
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
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* update py-xopen (add 0.8.2 checksum)
* refine version specific dependencies
add py-bz2file, which needs to be created
* create py-bz2file
* Revert "refine version specific dependencies"
This reverts commit 70649da98851fefb2f936ca99a012fe6bef07b70.
* Revert "update py-xopen (add 0.8.2 checksum)"
This reverts commit 7400f44caa6e98419eb4bc3107704b91e8a2018b.
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* update py-xopen (add 0.8.2 checksum)
* refine version specific dependencies
add py-bz2file, which needs to be created
* py-bz2file needed when built with python 2.7
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
* space after comma
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* add new package py-dnaio
* provide git url with https, not ssh, protocol
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
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- Fix trailing whitespace missed by the bug described in #12755.
- Fix other style issues that have crept in over time (this can happen
when flake8 adds new checks with new versions)
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5.0 (#12718)
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and making Fortran an option that can be disabled. Also added
support for the POSIX I/O wrapper and OMPT for OpenMP.
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There are problems with libunwind for arm and trying to use it with mesa.
See for example:
https://github.com/grate-driver/mesa/issues/6
disabling use of libunwind for arm, allows the package to be built
Signed-off-by: Howard Pritchard <hppritcha@gmail.com>
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Apply configure options to skip manpage generation
and test builds for both wide and non-wide builts.
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This way luarocks does not attempt to pull stuff from the internet.
Fix #3909
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