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2020-05-14Pipelines: Support DAG scheduling and dynamic child pipelinesScott Wittenburg1-0/+3
This change also adds a code path through the spack ci pipelines infrastructure which supports PR testing on the Spack repository. Gitlab pipelines run as a result of a PR (either creation or pushing to a PR branch) will only verify that the packages in the environment build without error. When the PR branch is merged to develop, another pipeline will run which results in the generated binaries getting pushed to the binary mirror.
2020-05-14namd: build on aarch64. (#16639)Toyohisa Kameyama1-2/+3
2020-05-14Fixing the build directory for cardioid. (#16640)Robert Blake1-16/+0
* Fixing the build directory for cardioid. * These imports are no longer needed due to deletions. Co-authored-by: Robert Blake <rob.c.blake.3@gmail.com>
2020-05-14scorep: Fix build with gcc@10: (#16642)Michael Kuhn2-1/+16
2020-05-14lammps: set LAMMPS_POTENTIALS in the runtime environment (#16643)Andrew W Elble1-0/+4
so lammps can find the installed potential files
2020-05-14New package: maloc (#16631)Jen Herting1-0/+39
* [maloc] created template * [maloc] added some build dependencies * [maloc] added homepage and description * [maloc] added doc variant in an attempt to disable documentation. Still builds doc though... at least when there is a system doxygen found. Having doxygen being a dependency here can bring python in and cause issues for dependents, even when listed as only a build dependency. Maybe this is a bug? * [maloc] flake8 and fixme removal * [maloc] shorted description
2020-05-14ucx: cuda / gdrcopy variants (#16605)Andrew W Elble1-1/+18
picking up where #15724 left off.
2020-05-14miniforge3: a new package. (#16644)健美猞猁1-0/+34
2020-05-14at-spi2-core: Add 2.36.0 (#16645)Michael Kuhn1-4/+6
The pkg-config file of newer versions of at-spi2-core includes dependencies for xtst, recordproto, inputproto and fixesproto, so they have to be available at runtime as well.
2020-05-14atk: Add 2.36.0 (#16646)Michael Kuhn1-0/+1
2020-05-14at-spi2-atk: Add 2.34.2 (#16647)Michael Kuhn1-0/+1
2020-05-14r-hmisc: new version and updated dependency (#16649)Amjad Kotobi1-0/+2
2020-05-14r-survival: new version and updated dependency (#16650)Amjad Kotobi1-0/+2
2020-05-13adios2: Fix build with gcc@10: (#16570)Michael Kuhn1-0/+5
2020-05-13Spack Package for ns-3 (#16630)Nathan1-0/+52
* Adding ns3 spack * Format and cleanup of ns3 spack package * Removing comments and fixing boost variant * Fixing formating
2020-05-13py-horovod: add new version (#16635)Adam J. Stewart1-2/+4
2020-05-13Helics: add python variant (#16625)Nathan1-0/+13
* Adding varient for python interface in HELICS * Append python interface to pythonpath * cleaning up blank lines * Update var/spack/repos/builtin/packages/helics/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-05-13revbayes: Update checksum (#16628)Nick Booher1-1/+1
2020-05-13conda4aarch64:New Package. (#16617)Toyohisa Kameyama1-0/+24
2020-05-13ncl: Fix build with gcc@10: (#16624)Michael Kuhn1-0/+7
2020-05-13r-exactextractr: new package (#16626)Amjad Kotobi1-0/+26
2020-05-13QE Update May 2020 (#16627)Nichols A. Romero1-5/+8
* Clarify comments about QMCPACK-to-QE converter. * Allow hdf5=serial with QE 6.4.1 + qmcpack, but apply filter_file. * Ammend comments about the use of the filter_file.
2020-05-13py-pint: added versions up to v0.11 (#16537)lpritch-lanl1-3/+9
Co-authored-by: Lori Pritchett-Sheats <lpritch@pn2002926.lanl.gov>
2020-05-13parallel-netcdf: fix build with gcc@10: (#16620)Michael Kuhn1-6/+20
2020-05-13r-xml2: new version & updated dependencies (#16604)Amjad Kotobi1-1/+2
* r-xml2: new version & updated dependencies * r-xml2: updated dependencies
2020-05-13ppopen-appl-fdm: added support to Fujitsu compilers. (#16616)Tomoki, Karatsu2-1/+17
2020-05-13charmpp: support for aarch64. (#16619)Toyohisa Kameyama1-0/+2
2020-05-13tcsh: fix build with gcc@10: (#16621)Michael Kuhn1-10/+11
2020-05-13esmf: fix build with gcc@10: (#16622)Michael Kuhn1-0/+3
2020-05-12Fix axom install target (#16613)Chris White1-1/+1
2020-05-12py-plotly: unfix dependency versions (fixes #16544) (#16546)Pariksheet Nanda1-3/+5
* py-plotly: unfix dependency versions (fixes #16544) * py-plotly: add missing dependencies for #16546 * py-plotly: match setup.py instead of requirements.txt for #16546
2020-05-12velvetoptimiser: new package at 2.2.6 (#16611)Justin S1-0/+22
2020-05-12r-testthat : dependencies and version updated (#16576)Amjad Kotobi1-0/+4
* r-testthat : dependencies and version updated * Adding version conditions for dependencies * r-testthat: Fix dependecies condition
2020-05-12py-scikit-learn: add new version (#16607)Adam J. Stewart1-3/+6
2020-05-12zstd: add 1.4.4 (#16608)Justin S1-0/+1
2020-05-12py-threadpoolctl: add new package (#16606)Adam J. Stewart1-0/+19
2020-05-12revbayes: update for 1.1.0 (#16603)Nick Booher1-8/+20
* revbayes: update for 1.1.0 * revbayes: Fix flake8
2020-05-12new version r-rcurl (#16550)Amjad Kotobi1-0/+2
* new version r-rcurl * RCurl dependency R version updated * Adding version conditions
2020-05-12new version r-cli (#16553)Amjad Kotobi1-0/+3
* new version r-cli * r-cli : dependencies updated * Adding version conditions for dependencies
2020-05-12new version r-ellipsis (#16556)Amjad Kotobi1-0/+2
* new version r-ellipsis * r-ellipsis : R dependency updated * Adding version conditions for dependencies
2020-05-12r-rematch2 : new package (#16563)Amjad Kotobi1-0/+23
* r-rematch2 : new package * Updating URL
2020-05-12r-roxygen : dependencies and version updated (#16565)Amjad Kotobi1-0/+5
* r-roxygen : dependencies and version updated * Dependencies updated for condition
2020-05-12r-purrr : dependencies and version update (#16566)Amjad Kotobi1-0/+2
* r-purrr : dependencies and version update * Dependencies updated for condition
2020-05-12r-rversions : new package (#16572)Amjad Kotobi1-0/+28
* r-rversions : new package * URL updated r-rversions
2020-05-12r-withr : dependencies and version updated (#16577)Amjad Kotobi1-0/+2
* r-withr : dependencies and version updated * Adding version conditions for dependencies
2020-05-12r-knitr : dependencies and version updated (#16579)Amjad Kotobi1-2/+3
* r-knitr : dependencies and version updated * Adding version conditions for dependencies
2020-05-12modylas: Add flag to use preprocessor when building with Fujitsu compiler. ↵Tomoki, Karatsu1-0/+2
(#16598)
2020-05-12New patch release SLEPc 3.13.2 (#16601)Jose E. Roman1-0/+1
2020-05-12py-horovod: link dependency for py-torch (#16600)Andrew W Elble1-1/+1
fix for same reasons as #16495.
2020-05-12caffe: fixed build error (#16520)Toyohisa Kameyama7-1/+362
* opencv 3.2 requires cmake 3.11 or older. caffe dependency is changed. * revert opencv variant to caffe. backport to opencv errors.
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