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2021-04-06seacas: add v2021-04-05 (#22784)Greg Sjaardema1-0/+1
2021-04-06openmpi: allow to build with ^slurm ~pmi for >3.0.0 with PMIx (#22086)Andrew W Elble1-2/+6
2021-04-06hydrogen, lbann: forward the CXXFLAGS to the HIP_HIPCC_FLAGS variable. (#22744)Brian Van Essen2-2/+5
2021-04-06zstd: add v1.4.9, switch to cmake to configure more easily (#22668)Harmen Stoppels1-37/+33
Also: - Add variants to control the build - Add a maintainer - Add master version
2021-04-06hdf5: patch for BOZ literal constant error when compiled with GCC 10. (#22509)Robert Mijakovic2-0/+17
2021-04-06doxygen: add version restriction (#22773)Seth R. Johnson1-1/+2
This triggered on my mac because clingo seems to have bootstrapped a very old version distributed by apple.
2021-04-06stress-ng: new package (#22777)Andrew W Elble1-0/+46
2021-04-06Add patch for latest hwloc@:1 to locate ncurses (#22776)Harmen Stoppels2-2/+36
* Add patch for latest hwloc@:1 to locate ncurses This way we don't have to depend on ncurses~termlib, which may run into issues when another package explicitly depends on ncurses+termlib * Move termcap to the back, cause it's a system symlink on macos and isn't set by spack
2021-04-06gpu-burn: add v1.1 and "master" (#22778)Andrew W Elble2-43/+18
2021-04-06rnaquast: add new package (#22648)Desmond Orton1-0/+37
2021-04-06trf: add v4.09.1 and other updates (#22782)Glenn Johnson1-5/+26
- add new version, 4.09.1 - use github url - convert to autotools package - deprecate version 4.07b: This version requires manual download and is a binary only installation.
2021-04-06repeatmasker: update and fix package (#22785)Glenn Johnson1-12/+23
- version 4.0.7 was not building - version 4.0.9 was not setting search correctly due to an extra "return" in config - added version 4.1.2-p1 - new version needs py-h5py - new version does not need utf8 patch - url format changed
2021-04-06hmmer: add v3.3.2 (#22787)Glenn Johnson1-1/+2
2021-04-06exabayes: add v1.5.1 (#22789)Andrew W Elble1-3/+2
2021-04-06libfabric: add v1.12.1 (#22790)Axel Huebl1-0/+1
Add latest patch release to fix build issues with unconditional usage of `infiniband/ib.h`
2021-04-04qt: backport build issue fix on 5.14 due to isystem (#22772)Valentin Volkl2-0/+108
2021-04-03rankstr: add v0.0.3 (#22763)Cameron Stanavige1-1/+2
2021-04-02New package: r-anytime (#22624)Jen Herting1-0/+25
Co-authored-by: Alex C Leute <aclrc@rit.edu>
2021-04-02New package: r-pheatmap (#22617)Jen Herting1-0/+24
Co-authored-by: Alex C Leute <aclrc@rit.edu>
2021-04-02New package: r-amelia (#22623)Jen Herting1-0/+27
Co-authored-by: Alex C Leute <aclrc@rit.edu>
2021-04-02New package py-gffutils (#22552)Desmond Orton1-0/+30
2021-04-02Ascent: CUDA ~shared (#22760)Axel Huebl2-1/+10
Add a conflict for CUDA and shared libraries in Ascent. The new concretizer will automatically change the default for Ascent in that case. Until then, dependencies like WarpX need to hint the `~shared` wish explicitly.
2021-04-02WarpX: 21.04 (#22740)Axel Huebl2-0/+9
Update WarpX: add first tagged version.
2021-04-02py-wheel: new version (#22751)Robert Mijakovic1-0/+1
Co-authored-by: Robert Mijakovic <robert.mijakovic@lrz.de>
2021-04-02igprof: new package (#22666)iarspider2-0/+165
2021-04-02sandbox: add build dependency on gawk (#22748)darmac1-0/+2
2021-04-02nekRS: new package (#22519)Thilina Rathnayake1-0/+141
This initial package recipe uses a custom-built wrapper to drive an internal CMake file. Since nekRS also includes built-in copies of several dependencies such as BLAS and HYPRE, it cannot be linked with other such dependencies. However, to work with the `ceed` metapackage, we cannot add `^blas` conflicts to nekRS. See https://github.com/spack/spack/pull/22519 for discussion.
2021-04-01axom: convert to Cached CMakePackageChris White2-357/+185
This updates axom to use the new CachedCMakePackage superclass. Co-authored-by: Greg Becker <becker33@llnl.gov>
2021-04-01Revert "CachedCMakePackage for using *.cmake initial config files (#19316)""Todd Gamblin2-185/+357
This reverts commit 7daf5823574dc18522f559a084095714cc9f3fb9.
2021-04-01Added ML Suite to ECP Proxy App Suite (#22728)Robert Pavel1-0/+8
2021-04-01argobots: add Argobots 1.1 and 1.0.1 (#22729)Shintaro Iwasaki1-0/+2
2021-04-01Update SLEPc and slepc4py to version 3.15 (#22714)Jose E. Roman4-2/+47
Co-authored-by: Satish Balay <balay@mcs.anl.gov>
2021-04-01Fix for static library export issue in blis package (#22673)AMD Toolchain Support1-1/+4
2021-04-01gdal package needs to import the 'os' module (#22731)Amiya Maji1-0/+2
* 'gdal+java' build needs to import the 'os' module (line 191). * Make style-check happy.
2021-04-01Fix pkgconfig dependencies (#22702)Michael Kuhn4-4/+4
pkgconfig is the correct virtual provider.
2021-04-01mpark-variant: ICC Patch (#22727)Simon Bolding2-0/+36
* Add patch for Intel C++ compiler - On some machines (in particular MacOSX Catalina), the icpc in some way utilizes the preprocessor of the associated "developer tools" used by icpc. This leads to, in some cases, a preprocessor claiming support for __tuple_element_packs, even though icpc (as of version 21.1) can't actually parse such code. Just use the MPARK_TUPLE_ELEMENT_PACK impl with __icc until icpc supports it, to avoid issues with developer tools that are untested. - The same patch has been PRed against mpark-variant
2021-04-01amrex: new version 21.04 (#22730)mic841-1/+2
2021-04-01xSDK: add ArborX (#22619)Daniel Arndt1-0/+3
2021-04-01New version of OpenLoops (#22240)iarspider3-43/+264
New version of OpenLoops; new list of processes; update lcg process collection Add script to scrape openloops website for process list
2021-04-01arm-forge: cleanup and upgrade to forge v21.0 (#22015)Nick Forrington1-109/+21
Backwards incompatible cleanup to target single-tarball-per-arch builds going forwards. * Replace per-distro versions with new per-arch builds, and add url_for_version to avoid specifying per tarball. * Customise environment setup to avoid adding lib to LD_LIBRARY_PATH. * Update homepage and licensing URLs. * Avoid shell interpretation when running textinstall.sh. * Added NickRF as maintainer.
2021-04-01Extra environment variables for Qt (#22717)iarspider1-0/+6
2021-04-01Fenicsx package updates for basix install (#22679)Chris Richardson5-9/+34
Co-authored-by: Garth N. Wells <gnw20@cam.ac.uk>
2021-04-01py-cython: new version (#22712)Robert Mijakovic1-0/+1
Co-authored-by: Robert Mijakovic <robert.mijakovic@lrz.de>
2021-04-01gchp: add version 13.0.1 and remove release candidate (#22572)William Downs1-4/+4
2021-04-01MUMPS: Various improvements to the package (#22575)Rémi Lacroix1-28/+31
Use `conflicts` directive whenever possible. This allows failing early when conflicting variants are used. Do not silently ignore `+parmetis` variant when `~metis`. Instead throw an error during concretization. Simplify the "Makefile.inc" generation. This will make easier to add new variants in the future.
2021-04-01libfabric: add 1.12.0 (#22694)Michael Kuhn1-0/+1
2021-04-01sqlite: add 3.35.3 (#22697)Michael Kuhn1-1/+4
2021-04-01leveldb: add 1.23 (#22695)Michael Kuhn1-0/+6
2021-04-01glib: add 2.66.8 (#22691)Michael Kuhn1-0/+1
2021-04-01qt: restrict patch to 5.12.7 (#22705)Amiya Maji1-1/+1
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